LOCUS       NZ_CP050398              607 bp    DNA     circular CON 09-JAN-2024
DEFINITION  Acinetobacter baumannii strain VB11737 plasmid pVB11737_7, complete
            sequence.
ACCESSION   NZ_CP050398
VERSION     NZ_CP050398.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN14410107
            Assembly: GCF_012934965.1
KEYWORDS    RefSeq.
SOURCE      Acinetobacter baumannii
  ORGANISM  Acinetobacter baumannii
            Bacteria; Pseudomonadota; Gammaproteobacteria; Moraxellales;
            Moraxellaceae; Acinetobacter; Acinetobacter calcoaceticus/baumannii
            complex.
REFERENCE   1  (bases 1 to 607)
  AUTHORS   Veeraraghavan,B., Vijayakumar,S., Amala,A., Francis,L. and
            Kirubananthan,A.
  TITLE     Complete genome sequencing for A.baumanii
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 607)
  AUTHORS   Veeraraghavan,B., Vijayakumar,S., Amala,A., Francis,L. and
            Kirubananthan,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (20-MAR-2020) Clinical Microbiology, Christian Medical
            College, Ida Scudder Road, Vellore 632004, India
COMMENT     ##Genome-Assembly-Data-START##
            Assembly Method                   :: Canu v. 1.7; Unicycler v. 0.4.6
            Genome Representation             :: Full
            Expected Final Version            :: Yes
            Genome Coverage                   :: 72.7314339x
            Sequencing Technology :: Illumina HiSeq; Oxford Nanopore GridION
            ##Genome-Assembly-Data-END##
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Date                   :: 01/09/2024 03:27:11
            Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline
            (PGAP)
            Annotation Method :: Best-placed reference protein set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,929
            CDSs (total)                      :: 3,834
            Genes (coding)                    :: 3,754
            CDSs (with protein)               :: 3,754
            Genes (RNA)                       :: 95
            rRNAs                             :: 6, 6, 6 (5S, 16S, 23S)
            complete rRNAs                    :: 6, 6, 6 (5S, 16S, 23S)
            tRNAs                             :: 73
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 80
            CDSs (without protein)            :: 80
            Pseudo Genes (ambiguous residues) :: 0 of 80
            Pseudo Genes (frameshifted)       :: 19 of 80
            Pseudo Genes (incomplete)         :: 48 of 80
            Pseudo Genes (internal stop)      :: 20 of 80
            Pseudo Genes (multiple problems)  :: 7 of 80
            ##Genome-Annotation-Data-END##
            REFSEQ INFORMATION: The reference sequence is identical to
            CP050398.1.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..607
                     /organism="Acinetobacter baumannii"
                     /mol_type="genomic DNA"
                     /strain="VB11737"
                     /isolation_source="blood"
                     /host="Homo sapiens"
                     /db_xref="taxon:470"
                     /plasmid="pVB11737_7"
                     /geo_loc_name="India"
                     /lat_lon="12.9246 N 79.1348 E"
                     /collection_date="2019"
                     /collected_by="Christian Medical College"
     gene            83..454
                     /locus_tag="HBM80_RS00550"
                     /old_locus_tag="HBM80_00550"
     CDS             83..454
                     /locus_tag="HBM80_RS00550"
                     /old_locus_tag="HBM80_00550"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000529372.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="WP_000529372.1"
                     /translation="MGQAKQRGTLEQRVKQAQEQKDDFYGTERSVAEVLAELGLPKEST
                     VKGYVIHLPEKDEFVAAINDNNISFSVAYARTPELAMIYDEPQKAISDAKKISKHKLLV
                     CVLFETSNQYMINDIWANY"
                     /name="hypothetical protein"
ORIGIN
        1 tgtagtttga caatcaggtc gtaaactaga cattaatgtt ctaaacttaa acaatatatt
       61 tgtaaaccaa aaggttgaat aaatgggaca agctaaacaa aggggtacac ttgagcaaag
      121 agtaaagcaa gctcaagaac aaaaagatga tttttatgga actgaaagaa gtgtagcaga
      181 agttctagct gaactaggct taccaaaaga aagtacagta aaaggttatg ttatccatct
      241 acctgaaaaa gatgaatttg tagctgcaat taatgacaat aatatttctt tttcagttgc
      301 ttatgctcgg acacctgaat tagcgatgat atatgatgaa ccacaaaaag cgatttcaga
      361 cgctaaaaag atttcaaaac ataagctatt ggtttgtgtt ttatttgaaa cttcaaacca
      421 atacatgatt aatgatattt gggctaatta ttagtctgag tttaaatcta ttatgtcaaa
      481 aattgcatat agttctaaac ttatgtttga ttgagtttag aactataatg taaatctatt
      541 caattgtttt tgttataagt tattgatttt catctttatg agtttaaaac tttattgtgt
      601 aaacaca
//
