LOCUS       NZ_CP048809             1741 bp    DNA     circular CON 01-APR-2024
DEFINITION  Morganella morganii strain MP63 plasmid pMP63C, complete sequence.
ACCESSION   NZ_CP048809
VERSION     NZ_CP048809.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN14085905
            Assembly: GCF_010748915.1
KEYWORDS    RefSeq.
SOURCE      Morganella morganii (Proteus morganii)
  ORGANISM  Morganella morganii
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Morganellaceae; Morganella.
REFERENCE   1  (bases 1 to 1741)
  AUTHORS   Cao,G.
  TITLE     Complete genome of Morganella morganii MP63
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 1741)
  AUTHORS   Cao,G.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-FEB-2020) Shandong Medicinal Biotechnology Center,
            Shandong First Medical University, 18877 Jinshi Road, Jinan 250062,
            China
COMMENT     ##Genome-Assembly-Data-START##
            Assembly Method                   :: SPAdes v. Dec-2019
            Genome Representation             :: Full
            Expected Final Version            :: Yes
            Genome Coverage                   :: 364.0x
            Sequencing Technology             :: BGISEQ
            ##Genome-Assembly-Data-END##
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_010748915.1-RS_2024_04_01
            Annotation Date                   :: 04/01/2024 03:38:21
            Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline
            (PGAP)
            Annotation Method :: Best-placed reference protein set; GeneMarkS-2+
            Annotation Software revision      :: 6.7
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,806
            CDSs (total)                      :: 3,699
            Genes (coding)                    :: 3,665
            CDSs (with protein)               :: 3,665
            Genes (RNA)                       :: 107
            rRNAs                             :: 8, 7, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 7, 7 (5S, 16S, 23S)
            tRNAs                             :: 81
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 10 of 34
            Pseudo Genes (incomplete)         :: 27 of 34
            Pseudo Genes (internal stop)      :: 8 of 34
            Pseudo Genes (multiple problems)  :: 9 of 34
            ##Genome-Annotation-Data-END##
            REFSEQ INFORMATION: The reference sequence is identical to
            CP048809.1.
            Bacteria and source DNA available from Dr Guangxiang Cao from
            Shandong First Medical University.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1741
                     /organism="Morganella morganii"
                     /mol_type="genomic DNA"
                     /strain="MP63"
                     /isolation_source="wastewater"
                     /db_xref="taxon:582"
                     /plasmid="pMP63C"
                     /geo_loc_name="China:Jinan"
                     /collection_date="2018-06-02"
     gene            complement(join(1427..1741,1..78))
                     /locus_tag="G3577_RS19035"
                     /old_locus_tag="G3577_19035"
     CDS             complement(join(1427..1741,1..78))
                     /locus_tag="G3577_RS19035"
                     /old_locus_tag="G3577_19035"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000393259.1"
                     /GO_function="GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA]"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="WP_025189010.1"
                     /translation="MKLLFIDDNMVFDIDNLKGFLNDTSSFGFIAKENNKIIGFAYCYT
                     LLRPDGKTMFYLHSIGMLPNYQDKGYGSKLLSFIKEYSKEIGCSEMFLITDKGNPRACH
                     VYEKLGGKNDYKDEIVYVYDYEKGDK"
                     /name="GNAT family N-acetyltransferase"
     gene            complement(<62..1426)
                     /gene="aph(2'')-I"
                     /locus_tag="G3577_RS19310"
                     /old_locus_tag="G3577_19040"
                     /pseudo=""
     CDS             complement(<62..1426)
                     /gene="aph(2'')-I"
                     /locus_tag="G3577_RS19310"
                     /old_locus_tag="G3577_19040"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012655884.1"
                     /GO_function="GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA]"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo=""
                     /codon_start=1
                     /transl_table=11
                     /product="APH(2'')-Ia/If/Ih family aminoglycoside
                     O-phosphotransferase"
                     /name="aph(2'')-I"
     ARG             complement(63..1426)
                     /name="aac(6')-Ie/aph(2'')-Ia"
                     /gene="aac(6')-Ie/aph(2'')-Ia"
                     /gene_name="bifunctional aminoglycoside N-acetyltransferase
                     AAC(6')-Ie/aminoglycoside O-phosphotransferase APH(2'')-Ia"
                     /tool="amrfinderplus"
                     /drug_class="AMINOGLYCOSIDE"
                     /identity="100.0"
                     /coverage="94.99"
     ARG             complement(60..1426)
                     /name="AAC(6')-Ie-APH(2'')-Ia bifunctional protein"
                     /gene="AAC(6')-Ie-APH(2'')-Ia bifunctional protein"
                     /gene_name="aminoglycoside bifunctional resistance protein"
                     /tool="rgi"
                     /drug_class="aminoglycoside antibiotic"
                     /identity="100.0"
                     /coverage="94.99"
ORIGIN
        1 tgaactggta tcattaagaa atccttttaa attatcaata tcaaaaacca tattatcatc
       61 aataaacaat agtttcaata ggataatatt cttcaactat atcttgatat tcttttgctt
      121 tctcaatatc tatatttcca tacattctta atatatcttc tccaaaattt gttcctattt
      181 cttcttcact atcttcaagt aagtatataa aatcacaata ttcatctata attccagaat
      241 ctccaaaatc aattattcca gttaatctat tattgccatc taacaataga tgattacaac
      301 taaaatcatt atggcataaa cactttttac cctcaaaaac tgttgttgca tttagtcttt
      361 ccataaaact ttctatataa tctttttcta tatcagttaa atcattataa atagtttcac
      421 gcaacaatat atactcttct aatacatttt gtttattatc aatagtacat tcactaatat
      481 ctgtataatc taaaccgtgc atttgtctta aaaaactggc aatatctcgt tttaacaaat
      541 tttgttcttc ttctgacata gtagaataaa tttctggtgt taaaaaagtt cctttaattt
      601 ctttataacc tagtatagat aattcatcac taatatacga atattcaata ttaggaattt
      661 ttacattagt ttctaaattt gtatttaaaa aattatatat tgctttttct tttgcataac
      721 cttttttctt attagtacta aattttgttt taaaaatgta ttcattatta actaaatatg
      781 ccacactatc ataaccacta ccgattattt caatactatc tactttgaaa ttatcaaagt
      841 aatgctcaat taaatatttc attgccttaa catttgtggc attatcatca tatctatatt
      901 ccattaaata acaatcttct tttttgccct cgtgtaattc atgttctggc aaatcttcaa
      961 taattctaaa accagatttt tggtatgccc ttattgctct tggattattt ttatgagggt
     1021 ctaaaataac tgcattagca tttctttctt ttttcaaaaa ttcaaaaatc aatttaatat
     1081 atcttgtacc aattccttta ctccaataat ttggctctcc tataaattga tccataccat
     1141 agactatctc atcagttttt ggataatgat aatcagtata taactcatca tacattttat
     1201 atatttgtcc atatccaata ggaacattgt tatattcaat aattactcta aaaacttcat
     1261 cttcccaagg ctctgtataa tgttttttta atgattctaa tgtatatttt ttatctctac
     1321 caccataaaa ttctaatact ctttcatcag ttaaccattt taacatcaaa ggaaaatcat
     1381 catctattaa agttcttata catatttcat tttcaactat attcatttat ttatcacctt
     1441 tttcataatc atatacatat actatttcat ctttataatc atttttacca cctaattttt
     1501 catatacatg gcaagctcta ggattacctt tatcagttat taaaaacatt tcagaacaac
     1561 caatctcttt agaatattcc ttaataaaag ataataattt tgaaccataa cctttgtctt
     1621 gatagttagg taacattcct attgagtgta aataaaacat tgtttttcca tcaggtctta
     1681 aaagtgtata gcaatatgca aatcctataa ttttattatt ttctttagct ataaacccaa
     1741 a
//
