LOCUS       NZ_CP045773             3869 bp    DNA     circular CON 31-OCT-2023
DEFINITION  Bacillus paranthracis strain CFSAN068816 plasmid p4CFSAN068816,
            complete sequence.
ACCESSION   NZ_CP045773
VERSION     NZ_CP045773.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN10574728
            Assembly: GCF_009648955.1
KEYWORDS    RefSeq.
SOURCE      Bacillus paranthracis
  ORGANISM  Bacillus paranthracis
            Bacteria; Bacillota; Bacilli; Bacillales; Bacillaceae; Bacillus;
            Bacillus cereus group.
REFERENCE   1  (bases 1 to 3869)
  AUTHORS   Mafiz,A., Kastanis,G. and Gonzalez Escalona,N.
  TITLE     Closed genomes of twenty-eight foodborne pathogens from the CFSAN
            verification set by a combination of long and short-reads
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 3869)
  AUTHORS   Mafiz,A., Kastanis,G. and Gonzalez Escalona,N.
  TITLE     Direct Submission
  JOURNAL   Submitted (01-NOV-2019) ORS/DM/MMSB, Food and Drug
            Administration-College Park, 5001 Campus Drive, College Park, MD
            20740-3835, USA
COMMENT     ##Genome-Assembly-Data-START##
            Assembly Method                   :: SPAdes, CANU v. 3.12.0, 1.7
            Genome Representation             :: Full
            Expected Final Version            :: Yes
            Genome Coverage                   :: 84, 43, 113, 105, 195, 264x
            Sequencing Technology :: Oxford Nanopore GridION, Illumina MiSeq
            ##Genome-Assembly-Data-END##
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Date                   :: 10/31/2023 05:35:12
            Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline
            (PGAP)
            Annotation Method :: Best-placed reference protein set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,867
            CDSs (total)                      :: 5,715
            Genes (coding)                    :: 5,522
            CDSs (with protein)               :: 5,522
            Genes (RNA)                       :: 152
            rRNAs                             :: 14, 14, 15 (5S, 16S, 23S)
            complete rRNAs                    :: 14, 14, 15 (5S, 16S, 23S)
            tRNAs                             :: 104
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 193
            CDSs (without protein)            :: 193
            Pseudo Genes (ambiguous residues) :: 0 of 193
            Pseudo Genes (frameshifted)       :: 64 of 193
            Pseudo Genes (incomplete)         :: 131 of 193
            Pseudo Genes (internal stop)      :: 39 of 193
            Pseudo Genes (multiple problems)  :: 35 of 193
            ##Genome-Annotation-Data-END##
            REFSEQ INFORMATION: The reference sequence is identical to
            CP045773.1.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..3869
                     /organism="Bacillus paranthracis"
                     /mol_type="genomic DNA"
                     /strain="CFSAN068816"
                     /isolation_source="Mac and Cheese"
                     /db_xref="taxon:2026186"
                     /plasmid="p4CFSAN068816"
                     /geo_loc_name="USA:CT"
                     /collection_date="2009-06-11"
                     /collected_by="FDA"
     Typing          complement(647..1188)
                     /name="rep_cluster_1931"
                     /typing="replicon"
                     /tool="MOB-suite"
                     /identity="100.0"
                     /coverage="100.0"
                     /evalue="0.0"
     Typing          2..606
                     /name="MOBV"
                     /typing="relaxase"
                     /tool="MOB-suite"
                     /identity="100.0"
                     /coverage="100.0"
                     /evalue="2.24e-125"
     Typing          3265..3869
                     /name="MOBV"
                     /typing="relaxase"
                     /tool="MOB-suite"
                     /identity="88.119"
                     /coverage="100.0"
                     /evalue="1.07e-112"
ORIGIN
        1 aaaaaggatt tagaaaagga aattctttct ttggaaaacc agctttttga aaagaaaaat
       61 gaattactgg aaatgaacga acgattgcca ggagaaatta agattaaagc tgagagagaa
      121 aagaaaacag aggttgttaa taaaggtttt ttaaaaaaag aaaaagtaga aaaaccaaca
      181 gggaattgga ttgttgaaac taaagaatta aaaagagtgc aaggaataat taacgctgga
      241 tattcagtga aaaaagatta tgatcgtttg cagcgtatgg atttagttaa agaaaacaaa
      301 gaattatgtg acaaagttga tagtttagct gaaggttatg ttaaagctat taacgaaaat
      361 acagatttgg aaaatgagaa tagagaattg cgtaaggaaa taagctcgtt aaaagcccat
      421 ataagagatt taaaggaaaa tgtaaaggtt ttataccata acacaaaaaa actcttagga
      481 aggcaatttg agggctttag aggtcttatt aagaacgagt tggatatgaa agggatagat
      541 aatcaatttg agcgtgaaca taaaaaagaa atgaagacta aacaacgagg gtatgacatg
      601 gagcgatgaa aacataaata aagcgagtag actttactac ccgctttatt ttaggttttc
      661 ccgttttcgc aaagctttaa atctatcaaa ttgtttacga tatatatagt ctttattttc
      721 ttttttgctg actaagattt tcccgtcgta ttttgtaaat tttttcttgt cgtttgaatc
      781 agtccacgct aaatcttcat ttactaaata aacatttgat gtacccattt ttagtacact
      841 caaaaatccg ttctcttcaa gtactttgat tcctctataa atagtcattt ttgattttcc
      901 aaagtaatct tcaaaagttg aatatgagca tgctaatgca ttcttgttat ccatgtgttc
      961 gattatgaaa aataaaagag aactagcgaa attgtggttt gccattaacc atcttagttc
     1021 tggcatgtta tctcgataaa gttgaatgaa attaagattc tttttttcac tttctttttt
     1081 ctgttgatct tgttcatttt tttcatctag ttctaataat ttttgaagtt ttttaaattc
     1141 atccgcgttt aattctatag tgattttttc ttgggagttc ttgtccattt ttccacccct
     1201 tttttgcaag aaggtatcac actatgatac ctatatgtat aatctttgtt atatcctata
     1261 acatgacctg atatatgtaa agacaaattt gttatattct tctacaaata ggtatcacaa
     1321 gctatgttac ctataggtat cacactatga tacctattaa actctgaaac ccttatatat
     1381 caaggcttct cttacgttcc ctttctatat ctcctaatag ggtttttctc cacgcaatgg
     1441 gcaggtagta ttttttgaga aacccactca aaaaatctcc accttttttc cattgcattc
     1501 cgaaattcgg ctggttttta gctttcgcca agccgaacag accaaaaacg aggttaagtt
     1561 gcccgacttg gaccagcaat tgtaccagcc gaaccaccca gttttatcga tctaagcaat
     1621 aagcttactc tatattcagt tacgttaagt tcttaggggc tagcccctcg cttcgcttca
     1681 ccccagcctt caccactcca cccaaaaaca agacgatcgt ttaaaataaa aaataaaata
     1741 agctgtccat atggacagct tatttacata aaattcgaaa gcggaagtca ataaatctat
     1801 catatatctt cagcgattta ttgctgaaga tacaactgtt ttgataatgg aataccctta
     1861 ttgaaaaatt ctgagtaatc gtttaaataa taatctgcta catcactttg accttgaaac
     1921 atgcatgtta tgattcctaa ttcttttgca ggtagcaaat ctaattctct atctccaata
     1981 gctagatcaa ttttgtgttt ttgatgcaag taagtatatg ctgatgggtt gggtttgcga
     2041 ggaaaaccat tatcaatcgt aaccatatct acaaagtatt tgtcccatcc ataatatttt
     2101 aaaattgcta aaactccatc tctgtgttta tgtgtcatga ttacattctt atctgcaaat
     2161 ttcaaaattt cttccacgcc atcaaatggt ttcatgtctt ttggagacaa ttcctttttt
     2221 aagcttttaa ttttctcttt ctggtcacta gaaacattat agtagtctag tgcatgtgag
     2281 tatgaaatct ttaatttttt ataaatctcc tgtttatcta tctcttctcc aagtactaga
     2341 gagagtattt tggtataggc aggatatgta ttaaaaagtg ttccgtcaaa gtcccataaa
     2401 atattcaatt aaatcaccct ttctattcca ttttatcaca agaatgtggt agccatactc
     2461 ttgttttctt tgtatactcc atacactatc agttaacata acgtctcatt atcggtagtg
     2521 aagacaaagg cggatcccta ttcccacaag gaatccgcct ttgtcttttt ctatgattct
     2581 atgcattttt ttatacattc ctattatggc gggcttttcg gcctccccat agttccctat
     2641 gtcttccgat tttttgcata aaatcttgca tactcttagc gtggtttttt tcaaaatgct
     2701 ggtggtactc cttaataaca agttcataga atgttgattt tataaatcaa aagagagggg
     2761 aacctatgta gtgctacttg agtagaaaat taggttttta attaggtaga ggtagctgca
     2821 tagcgtgtgt caacggtacc ggaccgaacc cgtaaggggg cgggaggata aggagttgac
     2881 acactcacta tgcaaccctc ttgtggttgt caaaaggtac ccttttgact ctgccaaccg
     2941 gcgagggagc ccctcaagga ttgaggggtt ggggagttgg attaaggggg tctggggaag
     3001 agttccccag caggtttgga cagagtccaa ggttttgttt tttgtcatgc aaagcatggc
     3061 ttggcgatag ccaaaacagc ctcgcagagc cttttcattg tgtacatgga gcgtagcgga
     3121 atgtcacaat acagaaaagg ttactttgcc aaggtaacaa agcttttggt atagtggaac
     3181 caaggagttg attcgttatg agtatgtcag tttctctcaa gaaggcaacg aacaaaacca
     3241 acattagaca caataacagg acaatgagcg agaaggaaaa agagcaaaat tcgcacatag
     3301 attattcaag gtctgacgaa aataaatatc ttgttcagaa agatttaaag aaattatatc
     3361 gagaagaatt tggagaagtg ttggagaact ataacgccaa acaaaaacgt aacgaccgaa
     3421 aaattgatga ctattataaa cacattcagt ccagtaaaaa aacatcactt cagcaagaaa
     3481 tgattattca agttggcgat aaagatgatt tttctagtaa acaagatttt gaaaaggcta
     3541 acgaaatttt agaagaatgg ttattgggat ttgaaaaacg aaatccaaat ttaaaaattt
     3601 ataacgcagt cattcataat gatgaagcga gcccacacat gcatttgaat tttgttccag
     3661 tagcaagcgg gtataaacgt ggacttgaaa agcaagtatc atttgaccga gcaattacgc
     3721 aacaagatcc aaaattagat aaaactcgtc cttttgatga ttggcgagaa aaagaagtga
     3781 agatattaga agaaatgtta aaagagcgtg gtatcgaacg gaaattagtt ggttcaaata
     3841 attataaaga tgtgaatgaa tacaaagaa
//
