LOCUS       NZ_CP044530             1491 bp    DNA     linear   CON 05-JAN-2024
DEFINITION  Klebsiella grimontii strain SS141 plasmid plamid_3.1.
ACCESSION   NZ_CP044530
VERSION     NZ_CP044530.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN10462700
            Assembly: GCF_004104525.2
KEYWORDS    RefSeq.
SOURCE      Klebsiella grimontii
  ORGANISM  Klebsiella grimontii
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Klebsiella/Raoultella group; Klebsiella.
REFERENCE   1  (bases 1 to 1491)
  AUTHORS   Hubbard,A.T.M., Reine,J., Newire,E., Botelho,J., Wright,E.,
            Murphy,E.A., Hutton,W. and Roberts,A.P.
  TITLE     Isolation of an antimicrobial resistant, biofilm forming, Klebsiella
            grimontii isolate from a re-usable water bottle
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 1491)
  AUTHORS   Hubbard,A.T.M., Reine,J., Newire,E., Botelho,J., Wright,E.,
            Murphy,E.A., Hutton,W. and Roberts,A.P.
  TITLE     Direct Submission
  JOURNAL   Submitted (29-SEP-2019) Department of Tropical Disease Biology,
            LSTM, Liverpool School of Tropical Medicine, Pembroke Place,
            Liverpool, England L3 5QA, United Kingdom
REFERENCE   3  (bases 1 to 1491)
  AUTHORS   Hubbard,A.T.M., Newire,E., Murphy,E.A., Hutton,W. and Roberts,A.P.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-DEC-2018) Parasitology, Liverpool School of Tropical
            Medicine, Pembroke Place, Liverpool, England L3 5QA, United Kingdom
COMMENT     ##Genome-Assembly-Data-START##
            Assembly Date                     :: 15-SEP-2019
            Assembly Method                   :: Unicycler v. 0.4.6.0
            Assembly Name                     :: K_grimontii
            Genome Representation             :: Full
            Expected Final Version            :: Yes
            Genome Coverage                   :: 136.0x
            Sequencing Technology             :: Oxford Nanopore; Illumina MiSeq
            ##Genome-Assembly-Data-END##
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Date                   :: 01/05/2024 03:51:48
            Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline
            (PGAP)
            Annotation Method :: Best-placed reference protein set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,980
            CDSs (total)                      :: 5,860
            Genes (coding)                    :: 5,725
            CDSs (with protein)               :: 5,725
            Genes (RNA)                       :: 120
            rRNAs                             :: 9, 8, 8 (5S, 16S, 23S)
            complete rRNAs                    :: 9, 8, 8 (5S, 16S, 23S)
            tRNAs                             :: 88
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 135
            CDSs (without protein)            :: 135
            Pseudo Genes (ambiguous residues) :: 0 of 135
            Pseudo Genes (frameshifted)       :: 54 of 135
            Pseudo Genes (incomplete)         :: 88 of 135
            Pseudo Genes (internal stop)      :: 21 of 135
            Pseudo Genes (multiple problems)  :: 26 of 135
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
            REFSEQ INFORMATION: The reference sequence is identical to
            CP044530.1.
            Bacteria and source DNA available from Dr Adam Robets.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
FEATURES             Location/Qualifiers
     source          1..1491
                     /organism="Klebsiella grimontii"
                     /mol_type="genomic DNA"
                     /strain="SS141"
                     /isolation_source="Coffee Cup"
                     /db_xref="taxon:2058152"
                     /plasmid="plamid_3.1"
                     /geo_loc_name="United Kingdom"
                     /lat_lon="51.5074 N 0.1278 W"
                     /collection_date="2018-03-01"
                     /collected_by="Dr Adam Roberts"
     gene            672..869
                     /locus_tag="EHW69_RS30280"
     CDS             672..869
                     /locus_tag="EHW69_RS30280"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="WP_045358392.1"
                     /translation="MERVLGIYVVGIIVSAGFLFIQEVRNGRRRSYTEEGASMLVGIIC
                     AFLWPLVLIAYFFDKKNGKL"
                     /name="hypothetical protein"
     gene            866..1285
                     /locus_tag="EHW69_RS30285"
     CDS             866..1285
                     /locus_tag="EHW69_RS30285"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="WP_128336926.1"
                     /translation="MKLSLFFISVITFLLAISPIAYSDNTIIPDRVYDPYRNSAVTPDG
                     TVYDRLTGGVLKASEHPQPNFGFPVQSSSDSCDTTYVKARTEDGRLLVTSDGVTLHVVD
                     NIVDVAHWQPNDELRVCGDRVINIDDNTSSSFTYN"
                     /name="hypothetical protein"
ORIGIN
        1 caccactaaa aatacccaca ccccacgcaa aattaaaatt ttgcagattc cttatttaca
       61 acaatgggtt aatgaaaaat aaatgtgcgg tgatgtgtta caaagtgcag atccaagtcg
      121 tggacgactc tatggcgaat cgctgacgaa ttgcccacga ttcatatgtg aatcacgctt
      181 tattatcata ttgttatgat gaatcgactc ttgattcaat tcatcacttt gggtgttttt
      241 tgctcatggt gactcttgat tcaattcacg attcgaatcg ccggtgaatc gtgtggtgag
      301 tcgtccggcg acttgccata acgtgattgc cggccgtcga cgaacccgat tcctgaacgt
      361 gctgaaaacc ggttttccgg ctgcgccggc aacgcttcac ggccacgcaa taaattgcgt
      421 ccccgttcac cgttttcgga tggaaagaac gccggaaaca ggacttactc tggctgaatg
      481 gcgtgaattt tcgcgctatg cacttgcgtg catactcatg catgccttaa aaacagagcc
      541 tgcgcgtttc tggcgggttt tcgggtggtt tgttgcctgt tttaccggtt tcccctcaga
      601 aacgccctga gaccgtttta gcggtgcgta caagggatgt tatgtttaat ctgataagaa
      661 cggaatgttt tatggaaagg gtattaggaa tttatgttgt cggtattatt gtgagtgccg
      721 gtttcctgtt tatccaagaa gttaggaacg ggaggcgcag aagttacacc gaagaaggtg
      781 cgtcaatgct tgtcggcata atttgtgcgt ttttgtggcc tttagtttta attgcatatt
      841 tttttgataa aaaaaatggg aaattatgaa gttaagtctg tttttcatct cggtcattac
      901 ttttttattg gctatatcac cgatagcata ctcagataac acgattattc ctgacagagt
      961 atatgatcct tatagaaatt cggctgtaac tcctgatggc accgtttatg accgtctgac
     1021 aggaggagtt ttgaaggcat cagagcaccc tcaacctaat tttgggtttc ctgttcaatc
     1081 ctcatcggat agttgtgata caacgtatgt taaagctagg acagaagacg gtaggctttt
     1141 agtcacgagc gacggagtaa ctctgcatgt agttgacaat attgttgatg ttgctcactg
     1201 gcaaccaaat gatgagctta gagtctgtgg cgatagagta atcaatattg atgacaatac
     1261 ttcctcctcg ttcacataca attaacctct tttattcaaa gaatatctat ggtgatgata
     1321 gaaagattga cgagcatgta tggggggata gccgaagaaa tgaaccaaag ttcaaaagga
     1381 tcttcttgag atcctttcag gagcgtcgta atctcttgct ctgaaaacga aaaaaccacc
     1441 tggggaggtg gtttttcgaa ggttcagtaa gttggggaac ttctgaaccg t
//
