LOCUS       NZ_CP044473             4226 bp    DNA     circular CON 09-JAN-2024
DEFINITION  Acinetobacter schindleri strain HZE23-1 plasmid pHZE23-1-10,
            complete sequence.
ACCESSION   NZ_CP044473
VERSION     NZ_CP044473.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN12478518
            Assembly: GCF_010918635.1
KEYWORDS    RefSeq.
SOURCE      Acinetobacter schindleri
  ORGANISM  Acinetobacter schindleri
            Bacteria; Pseudomonadota; Gammaproteobacteria; Moraxellales;
            Moraxellaceae; Acinetobacter.
REFERENCE   1  (bases 1 to 4226)
  AUTHORS   Cui,C., Chen,C., Sun,J. and Liu,Y.
  TITLE     Non-baumannii Acinetobacter spp. carrying blaNDM-1 isolated in China
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4226)
  AUTHORS   Cui,C., Chen,C., Sun,J. and Liu,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (17-SEP-2019) College of Veterinary Medicine, South China
            Agricultural University, 483 Wushan Street, Guangzhou 510642, China
COMMENT     ##Genome-Assembly-Data-START##
            Assembly Method                   :: Unicycler v. 0.4.1
            Genome Representation             :: Full
            Expected Final Version            :: Yes
            Genome Coverage                   :: 100x
            Sequencing Technology             :: PacBio RSII
            ##Genome-Assembly-Data-END##
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Date                   :: 01/09/2024 03:25:27
            Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline
            (PGAP)
            Annotation Method :: Best-placed reference protein set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,281
            CDSs (total)                      :: 3,169
            Genes (coding)                    :: 3,073
            CDSs (with protein)               :: 3,073
            Genes (RNA)                       :: 112
            rRNAs                             :: 7, 7, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 7, 7, 7 (5S, 16S, 23S)
            tRNAs                             :: 87
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 96
            CDSs (without protein)            :: 96
            Pseudo Genes (ambiguous residues) :: 0 of 96
            Pseudo Genes (frameshifted)       :: 28 of 96
            Pseudo Genes (incomplete)         :: 72 of 96
            Pseudo Genes (internal stop)      :: 23 of 96
            Pseudo Genes (multiple problems)  :: 23 of 96
            ##Genome-Annotation-Data-END##
            REFSEQ INFORMATION: The reference sequence is identical to
            CP044473.1.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..4226
                     /organism="Acinetobacter schindleri"
                     /mol_type="genomic DNA"
                     /strain="HZE23-1"
                     /isolation_source="stool"
                     /host="goose"
                     /db_xref="taxon:108981"
                     /plasmid="pHZE23-1-10"
                     /geo_loc_name="China:Huizhou City, Guangdong Province"
                     /lat_lon="23.12 N 114.42 E"
                     /collection_date="2018-01-20"
                     /collected_by="chaoyuecui"
     gene            complement(<584..1432)
                     /locus_tag="FSC10_RS16620"
                     /pseudo=""
     CDS             complement(<584..1432)
                     /locus_tag="FSC10_RS16620"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000635827.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo=""
                     /codon_start=1
                     /transl_table=11
                     /product="relaxase/mobilization nuclease domain-containing
                     protein"
                     /name="relaxase/mobilization nuclease domain-containing
                     protein"
     gene            complement(1413..1757)
                     /gene="mobC"
                     /locus_tag="FSC10_RS16315"
                     /old_locus_tag="FSC10_16440"
     CDS             complement(1413..1757)
                     /gene="mobC"
                     /locus_tag="FSC10_RS16315"
                     /old_locus_tag="FSC10_16440"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004282283.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="plasmid mobilization relaxosome protein MobC"
                     /protein_id="WP_110393193.1"
                     /translation="MTKQDVVKRQKEIKIRLTDEEHEKLLKLCTKASLASWMRETCLGE
                     KQPKRNQIREVDPQLLRQLASIGNNLNQIARIMNQQSKANSAIDRIAVITALAGVEREL
                     QRLHDDHKNT"
                     /name="mobC"
     gene            complement(2298..3251)
                     /locus_tag="FSC10_RS16320"
                     /old_locus_tag="FSC10_16445"
     CDS             complement(2298..3251)
                     /locus_tag="FSC10_RS16320"
                     /old_locus_tag="FSC10_16445"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004918192.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="replication initiation protein"
                     /protein_id="WP_087696064.1"
                     /translation="MINNQQFTADFYAKLPHKPYCSDDLGYGVIIRPKKTAIQMPYIQH
                     NQPCLVTSLVFDIDRPDAFFAWFDANLPKPNWIAKNKQNCHAHVGYMLSAPVCTSHRAK
                     QNILEYLAKIEQAYTLALGADRGYSGLITKNPCHSTWETHISNVQPYELGYLADFVELQ
                     ELKTDLQEVSGLGRNCMMFDTVRFWAYKAIREHLSVGFDRWYAEVLEQAKNVNGAFLQP
                     LPYSEVKATAKSVARWVWRNHAAAHAKFIERQAAKGRKGDSSHGGKARSAQYSDMRQEA
                     LKMHLMGKSIKEISEYLSVHRNSVSKWIKNPCTSAT"
                     /name="replication initiation protein"
     gene            complement(3472..3792)
                     /locus_tag="FSC10_RS16325"
                     /old_locus_tag="FSC10_16450"
     CDS             complement(3472..3792)
                     /locus_tag="FSC10_RS16325"
                     /old_locus_tag="FSC10_16450"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005407434.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="WP_068553058.1"
                     /translation="MFKILAISLLGLSLIGCGNSDPNAPSKPKKPKTEMQMQAAKFSSM
                     SRCLKSIQDTTKLPLKPMTDKPEKVTGFLGDTERQFYCGIKETGTEGTFVEGWYTEEVE
                     VY"
                     /name="hypothetical protein"
     gene            3823..4158
                     /locus_tag="FSC10_RS16330"
                     /old_locus_tag="FSC10_16455"
     CDS             3823..4158
                     /locus_tag="FSC10_RS16330"
                     /old_locus_tag="FSC10_16455"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000720086.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="WP_087696065.1"
                     /translation="MKKLVLIFIAIFATGHALADTLIPRSASGDKGKYYLIKQTKSGDI
                     VTALHKRVGVDSIGYTSTKTNCKTGKMQEIGYSEISATAIKPNPTQWFDLVPGSSKHDL
                     YKFVCKK"
                     /name="hypothetical protein"
ORIGIN
        1 ctcttgtatt gtggttaact gattgttcaa aagcctgttt tgtttctcga agtctttcag
       61 ttgtccattc aagtcgctga catgctttat taagttgttc cagttgtccg cttgtttccg
      121 atctgtttcg gaaatacttt ccagtaagct cttgaaggct gccttgatag cttgattttc
      181 ctgccgtgta gcttcgaaca tctgctgtaa atcggcttct ctctgctgct gttgtgcttg
      241 agcttgttcc aaggcttcga gtaagtgctt ttcgagttct gtcatcaatt aataccccat
      301 tggcactaga tagccaccct tccagcttcc tgctttggtg ttcatctgaa tgcatgtgcg
      361 ttttcggttc ttgttgtcta tacagttcgt tatattcaaa ttgccccctg cgtccttcaa
      421 ctgttgaatt gtggcctgtt gctgggctat taagtctgcg ttcttgccga ttttgtagct
      481 ctgatacgtc aaaattcccc acatcaatag aagcgttgtt acgatggcta tggctacgat
      541 gctccaagtt tttaacataa tcgggaacag acgtttgttc tgctcttgga tagcggattt
      601 gattactttc tcgttttcgt tcagtaagcc gatcaagcgt tgctcgtgct gtttgaactc
      661 ggctgctacg atctgctctg tattcttggc ttgctcgttc gatgtctgct cgaagttctt
      721 tgccaaatct aaaatcttgc tcatagatag ccccttttag acggatattc tgcccccctt
      781 cggggtcttt gatactgata cttttcttag tggttcgggc tatctcaaac cctgctgatt
      841 caagcgtttt gactacatca tcacgatttt ttagctctcc acgttccgct acgcttaaaa
      901 gcccgtttgt aatagcttca cacgcttcaa ttttggttct aggtaaatta ttgggtgtac
      961 atagttcacg cttgttcaaa gggtcattag ggtcttttaa ctggtaatga tcgtttacta
     1021 agtctttcca agcgtttaaa cgtggacggt ctgccttgtc ataatatggc tgtaggcgtt
     1081 ttccgctatg caattccaca ttggcaacga caaaatttaa ttccaggcgg tctttatcct
     1141 ggtgctgtac ccataaaatt gaatattggt ctttatctag tccaggaagt aatgcacgtt
     1201 caaagctatc catgatctgt tgcttttggt gttcatctaa atcacgctcg gcaaacgata
     1261 aaacaccaga cgtatatttc tgagcaaagt tagtgctatc aatcagctga atcatttgtt
     1321 cagggtcgcc acggtctagc cttgcgtctt cccgatctcg gtctttgcca agtaaataat
     1381 caacgggacc acagccacca cctacaccac gactatgtat ttttatgatc atcgtgcaat
     1441 ctctgtaatt ctcgctctac gcctgctaaa gcagtaataa cagcaattcg gtctatcgca
     1501 gaattagctt tgctctgttg attcatgatt ctggcaatct ggttcaggtt attaccaata
     1561 cttgcaagtt gtctgagtaa ctgaggatct acttcgcgga tctgattacg ttttggctgt
     1621 ttttcaccta agcaagtttc acgcatccaa ctagctagac tggctttagt gcatagcttc
     1681 aaaagctttt catgttcttc atccgtcaaa cggattttga tttccttctg tcttttcact
     1741 acgtcttgtt ttgtcatgac taaatccaat cctcggcggt aaccggacaa agggaaaatc
     1801 tatgattttt tctttgggcg gttttcgggg gtgtcggggg tgaagcccct gatccagtgc
     1861 cacaaaaggg aatcttcaag cgaagcgaag aaagtcccct ttgtgtgtgc tggctaatca
     1921 caatagcatg ttgatctagc gcaggcaaga ttcgtcagaa tattggctgc ctgatcaaag
     1981 gctatctggg attaggcccg tattaaatta gtcgttacaa gattatggac aatcgcaagc
     2041 gaacgccttt tctgatctat gcacaaacac tatgcataac tccgcataaa tcacagattt
     2101 atacgttgag ttacacacag gtttgatgca caggaaaagt ctttgcccac aaccattgct
     2161 aactccttca gtcatagttt tttaaaaatt taattcagaa ataaaaaagc cccgtttaag
     2221 acagggctga tatctgattt aggttgcact ttcacacctg cacgaatcaa aaaccgttaa
     2281 acgggctgat atctgattta ggttgcactt gtgcatggat tttttatcca tttcgacacg
     2341 ctatttcgat gcacgcttaa gtattctgaa atttctttga tgctcttacc catgagatgc
     2401 atttttaagg cttcctgacg catatcgcta tactgtgctg atctagcttt accgccatga
     2461 ctagaatcgc ctttacgccc tttagcagcc tgacgctcta taaactttgc atgtgctgct
     2521 gcatggttac gccataccca gcgagcgaca gatttagctg tggctttcac ttctgaatac
     2581 ggaagtggct gtaaaaacgc tccatttacg tttttagcct gttctagtac ttctgcatac
     2641 cacctatcga acccaacact taaatgttct ctaatcgctt tataggccca aaaacgcact
     2701 gtatcaaaca tcatacagtt acgaccaagt cctgaaacct cttgtaaatc ggttttaagc
     2761 tcttgaagct cgacaaaatc agctaaataa cccagttcat acggttggac gttagaaata
     2821 tgcgtttccc atgtactgtg gcatgggttt ttagtgatta agcccgaata gccccgatct
     2881 gcgcctaaag caagcgtgta cgcttgctca atcttggcta gatactcaag aatattctgt
     2941 tttgctcgat gtgacgtaca aactggtgct gaaagcatgt atcccacatg agcgtggcaa
     3001 ttctgcttgt ttttggctat ccagttaggt tttggtaggt ttgcatcaaa ccaagcaaaa
     3061 aaagcgtctg gtcgatctat atcaaacact aaagaagtga ctaaacacgg ttgattgtgt
     3121 tggatatacg gcatttggat agccgttttc tttggtcgga tgattacccc ataccctaag
     3181 tcgtccgaac agtaaggttt gtgaggtaat tttgcgtaaa aatctgctgt aaattgttgg
     3241 ttattgatca ctagcaacgt ccaaggtgtt gcaatgcgtc aaaacatcag tacaattgca
     3301 agtatcgagt ttgcgtttga cttatgcttt aagcatttgt ttaacaaaga gaaaaaagtg
     3361 agcctgccag cttgcttttt tttcgcctac agaaatgtac cactctttgc catacatttc
     3421 aaaatttctt ttcttaacat tgacttatgc catatttggc ccttttcatt gttaataaac
     3481 ttctacttct tcggtgtacc atccttctac gaaagtacct tcagtacctg tttctttgat
     3541 tccgcaataa aactgtctct ctgtatcccc aagaaaaccc gtaacttttt ctggtttatc
     3601 tgtcataggc ttcaaaggta atttagttgt atcttgaatc gactttaaac atctagacat
     3661 actagagaat ttagccgctt gcatctgcat ttctgtttta ggttttttag gttttgaagg
     3721 cgcattagga tcagaatttc cacaccctat taaagataaa cctagtaaac ttatcgcgag
     3781 aattttaaac atttaaagcc ccttatttag agtaaaaaga atatgaaaaa actagtactt
     3841 atatttatcg ctatatttgc tactggccat gctttagcag atacccttat tccgcgaagt
     3901 gcgtcagggg ataaaggtaa atactattta ataaaacaaa caaaatcagg tgatattgtc
     3961 acagctttac ataagcgagt aggcgttgac agtattggtt atacctctac taaaaccaac
     4021 tgtaaaacag gaaaaatgca ggaaattgga tacagtgaaa tttctgctac agcaattaag
     4081 ccaaatccaa ctcagtggtt tgacttagta cccggttcta gcaaacacga cctatataaa
     4141 tttgtatgta agaaataagc ttattcacct cattttagga ctgtaactaa tttgaggttt
     4201 attcattttt tcaactttat caactg
//
