LOCUS       NZ_CP042577             1697 bp    DNA     circular CON 15-APR-2024
DEFINITION  Enterobacter hormaechei strain E5 plasmid pE5_006, complete
            sequence.
ACCESSION   NZ_CP042577
VERSION     NZ_CP042577.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN12289291
            Assembly: GCF_008931525.1
KEYWORDS    RefSeq.
SOURCE      Enterobacter hormaechei
  ORGANISM  Enterobacter hormaechei
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Enterobacter; Enterobacter cloacae complex.
REFERENCE   1  (bases 1 to 1697)
  AUTHORS   Phan,H.T.T., Stoesser,N., Gordon,K.A., Crook,D., Walker,S.A.,
            Mathers,A.J., Peto,T.E.A., George,S. and Lipworth,S.I.
  TITLE     Genomic Dynamics of Species and Mobile Genetic Elements in a
            Prolonged blaIMP-4-associated Carbapenemase Outbreak in an
            Australian Hospital
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 1697)
  AUTHORS   Phan,H.T.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (01-AUG-2019) Nuffield Department of Micriobiology,
            University of Oxford, Headley Way, Oxford, Oxford OX3 7BN, United
            Kingdom
COMMENT     ##Genome-Assembly-Data-START##
            Assembly Date                     :: SEP-2017
            Assembly Method                   :: Unicycler v. SEP-2017
            Assembly Name                     :: E5_oz_imp.uniclycerAssembly.fsa
            Genome Representation             :: Full
            Expected Final Version            :: Yes
            Reference-guided Assembly         :: na
            Genome Coverage                   :: 5593x
            Sequencing Technology             :: Oxford Nanopore MiniION
            ##Genome-Assembly-Data-END##
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_008931525.1-RS_2024_04_14
            Annotation Date                   :: 04/14/2024 20:43:22
            Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline
            (PGAP)
            Annotation Method :: Best-placed reference protein set; GeneMarkS-2+
            Annotation Software revision      :: 6.7
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,080
            CDSs (total)                      :: 4,961
            Genes (coding)                    :: 4,820
            CDSs (with protein)               :: 4,820
            Genes (RNA)                       :: 119
            rRNAs                             :: 9, 8, 8 (5S, 16S, 23S)
            complete rRNAs                    :: 9, 8, 8 (5S, 16S, 23S)
            tRNAs                             :: 85
            ncRNAs                            :: 9
            Pseudo Genes (total)              :: 141
            CDSs (without protein)            :: 141
            Pseudo Genes (ambiguous residues) :: 0 of 141
            Pseudo Genes (frameshifted)       :: 50 of 141
            Pseudo Genes (incomplete)         :: 102 of 141
            Pseudo Genes (internal stop)      :: 23 of 141
            Pseudo Genes (multiple problems)  :: 29 of 141
            Pseudo Genes (short protein)      :: 1 of 141
            ##Genome-Annotation-Data-END##
            REFSEQ INFORMATION: The reference sequence is identical to
            CP042577.1.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1697
                     /organism="Enterobacter hormaechei"
                     /mol_type="genomic DNA"
                     /strain="E5"
                     /isolation_source="Shower 3"
                     /db_xref="taxon:158836"
                     /plasmid="pE5_006"
                     /geo_loc_name="Australia: Sydney"
                     /collection_date="2012-06-13"
                     /collected_by="Concord Repatriation Hospital Sydney
                     Australia"
     gene            complement(951..1151)
                     /locus_tag="FR760_RS25680"
                     /old_locus_tag="FR760_25685"
     CDS             complement(951..1151)
                     /locus_tag="FR760_RS25680"
                     /old_locus_tag="FR760_25685"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="WP_073553799.1"
                     /translation="MLKKDDIILIKSYGNEKTKIFLRGVNEVLMIDASFEEVKFAINND
                     LQDLQDLQGMQAVSAPLKIVT"
                     /name="hypothetical protein"
ORIGIN
        1 ctgtgattct gtcacggggc ttttgtacat ttaaaggccc ggaatcaaaa acatctcctt
       61 cacatgaaat tcagtaacgc tcgccgcagt actgactagc ggagtctgtc agtgcgagga
      121 agcgtcatat ctaccttgct gagataagca ctgtcacacg gagtctgaac gtgaacaaac
      181 aacaaaagtc agtcatgaac atggcgaaac ttatacgtgg ccagtaatac cccggtatta
      241 ctctttattt ctttcctttc atgtaattac agtggatttt aatacccggg tattactcgt
      301 gaaaacgaaa tattcctttt ttttctttta attcatgtag ttgcgatgaa aatcgcggct
      361 gcgttaggtg tatgaccatt taagggttaa aaaatcatca tttttggtag ggcgctctcc
      421 gtaggttaag ggttatttgg ctaaaaagcg tcctgttctt tgatggtcat gcttgcatga
      481 ccatctgagc aaccaaaaac tacagataaa ctacaaaaaa cgttttgcat tagtgatggc
      541 agactacaag aaaactacag ataaactaaa aagtaactac cgaatcacct cagatccgtt
      601 ccctgaacca ttcgtacatc gacccccttc ctgaacgtgc tgaaaacggg ttttccggct
      661 gcgccggcaa cgcctcacgg ccacgcaata aattgcgcat ccgttcaccg ttatcggggt
      721 ggttcgtggt ggctttcagg gcgttcatcg gattttagcg gctaaaatcc cggccaggta
      781 tgtccgtgca tagccatgca gtcgcgccag aatcatcagg ggcgtttttt ctcgatatgg
      841 tcacagaaag gtgtgtgttt caggccggag gcctcagaaa cgccctgagg gcctctcagg
      901 cggtgcgggc aacggatgtt atggtaaatg ttgagtgctc ttactaaaaa tcaggttact
      961 atttttagcg gtgcgcttac tgcctgcatt ccctgaagat cctgaagatc ctgaaggtca
     1021 ttattgatag caaactttac ctcttcaaag ctcgcatcaa tcattagaac ctcattcaca
     1081 ccccgtaaaa atatttttgt tttttcgtta ccatatgatt ttattaggat aatatcatct
     1141 ttttttagca tgatactttc gttacttatt gttttgagat gaagcatcgt catggttttt
     1201 tttgcatgtg cttgttaagg ggattgagat tattcctaaa tccttgagtt tgtacataca
     1261 aaaaaaacaa aaaaaatcct aatgcccccg tggtgggtat ataaaaatca cggggagcgt
     1321 agcgaccttc gtctagctcg tttcttgtgt gtctcaccct gcaaaaggtt tgattgtgtg
     1381 ggcgctgtgc tgacgtctga gaatcacact ttgccgctta ctgctgtctt attcgctcat
     1441 tttatcaggt gcttgttatc gtacagcgag acggggtaga gcctaactct ttcgcggtta
     1501 agttacgttc ccaccaattt gcctgtttat cctgccggag tccggggcgt agacctgagc
     1561 gtctaaggtg cagatatgat tttaatgtcg ttgaatggta ttaagctggt agtgacatcg
     1621 ctagccagcc ctgctaggat ttagattctc acgtctgatc ctggcaggta tctgcgaaga
     1681 attagagtac cgaagcc
//
