LOCUS       NZ_CP035943             1791 bp    DNA     circular CON 22-APR-2024
DEFINITION  Acinetobacter cumulans strain WCHAc060092 plasmid p8_060092,
            complete sequence.
ACCESSION   NZ_CP035943
VERSION     NZ_CP035943.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN08772519
            Assembly: GCF_003024525.3
KEYWORDS    RefSeq.
SOURCE      Acinetobacter cumulans
  ORGANISM  Acinetobacter cumulans
            Bacteria; Pseudomonadota; Gammaproteobacteria; Moraxellales;
            Moraxellaceae; Acinetobacter.
REFERENCE   1  (bases 1 to 1791)
  AUTHORS   Qin,J., Maixnerova,M., Nemec,M., Feng,Y., Zhang,X., Nemec,A. and
            Zong,Z.
  TITLE     Acinetobacter cumulans sp. nov., isolated from hospital sewage and
            capable of acquisition of multiple antibiotic resistance genes
  JOURNAL   Syst Appl Microbiol 42 (3), 319-325 (2019)
   PUBMED   30808586
REFERENCE   2  (bases 1 to 1791)
  AUTHORS   Qin,J., Long,H., Feng,Y. and Zong,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2019) Center of Infectious Diseases, West China
            Hospital, Sichuan University, Guoxuexiang 37, Chengdu, Sichuan
            610041, China
  REMARK    Sequence update by submitter
REFERENCE   3  (bases 1 to 1791)
  AUTHORS   Qin,J., Long,H., Feng,Y. and Zong,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (13-FEB-2019) Center of Infectious Diseases, West China
            Hospital, Sichuan University, Guoxuexiang 37, Chengdu, Sichuan
            610041, China
REFERENCE   4  (bases 1 to 1791)
  AUTHORS   Qin,J., Feng,Y. and Zong,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAR-2018) Center of Infectious Diseases, West China
            Hospital, Sichuan University, Guoxuexiang 37, Chengdu, Sichuan
            610041, China
COMMENT     ##Genome-Assembly-Data-START##
            Assembly Method                   :: Unicycler v. 0.4.7
            Genome Representation             :: Full
            Expected Final Version            :: Yes
            Genome Coverage                   :: 200.0x
            Sequencing Technology :: Illumina HiSeq; Oxford Nanopore MiniION
            ##Genome-Assembly-Data-END##
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_003024525.3-RS_2024_04_22
            Annotation Date                   :: 04/22/2024 04:03:58
            Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline
            (PGAP)
            Annotation Method :: Best-placed reference protein set; GeneMarkS-2+
            Annotation Software revision      :: 6.7
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,515
            CDSs (total)                      :: 3,393
            Genes (coding)                    :: 3,310
            CDSs (with protein)               :: 3,310
            Genes (RNA)                       :: 122
            rRNAs                             :: 7, 7, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 7, 7, 7 (5S, 16S, 23S)
            tRNAs                             :: 96
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 83
            CDSs (without protein)            :: 83
            Pseudo Genes (ambiguous residues) :: 0 of 83
            Pseudo Genes (frameshifted)       :: 26 of 83
            Pseudo Genes (incomplete)         :: 44 of 83
            Pseudo Genes (internal stop)      :: 25 of 83
            Pseudo Genes (multiple problems)  :: 11 of 83
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
            REFSEQ INFORMATION: The reference sequence is identical to
            CP035943.1.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1791
                     /organism="Acinetobacter cumulans"
                     /mol_type="genomic DNA"
                     /strain="WCHAc060092"
                     /isolation_source="Sewage"
                     /type_material="type strain of Acinetobacter cumulans"
                     /db_xref="taxon:2136182"
                     /plasmid="p8_060092"
                     /geo_loc_name="China: Chengdu, Sichuan"
                     /collection_date="2018"
     gene            complement(join(1759..1791,1..216))
                     /locus_tag="C9E88_RS17485"
                     /old_locus_tag="C9E88_016745"
     CDS             complement(join(1759..1791,1..216))
                     /locus_tag="C9E88_RS17485"
                     /old_locus_tag="C9E88_016745"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="WP_106986770.1"
                     /translation="MARKRIGLSVRPEYHEKLLKLAEYQNTTITTVVGELLNECESAVD
                     LMLRAYEQIEKGVDQQKVLTNMLAEGLGIASEKLKQE"
                     /name="hypothetical protein"
     gene            complement(450..1682)
                     /locus_tag="C9E88_RS17490"
                     /old_locus_tag="C9E88_016750"
     CDS             complement(450..1682)
                     /locus_tag="C9E88_RS17490"
                     /old_locus_tag="C9E88_016750"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000271233.1"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_process="GO:0006260 - DNA replication [Evidence IEA]"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein rep"
                     /protein_id="WP_137287953.1"
                     /translation="MYGQNVENQIGLSASHLRTAEGSQASGGDALPSIQFVTDGRGNLK
                     PLGNNTDNSSIPTTQGFQAIKERFKLLESARKILDGERTQHCFYNRVDKNDGVGVTFNK
                     LRKKANYTNVMRCANAWGCPVCASIISEHRKCEVKEAMDWWKKQGGSVLLLTLTVPHYS
                     DTDIKQLKKDLKKAYGRFFKGIRLSQNMFERWQIKHYISCFEITHGTNGFHPHYHVLLF
                     VPYAVTKDSIPGIKKDMYNVWKDCCLKSGLDEPSEKHGLDLQAGNKAGSYVAKWGLEHE
                     MTKGHVKKGKENSRTPFDILRSYSEEENPADANLFKLYYFAFKGTRQLNWSKGLKKLVS
                     KAEEKTDQEIVDDTDNVAELLFKLDIEMWHAVRKQKKQGELLVAVAEDQTLKKPMELIR
                     QCLVDQGQLTT"
                     /name="protein rep"
ORIGIN
        1 taaaccttca gcaagcatgt tagttaaaac tttttgttga tccacgcctt tttcaatttg
       61 ttcataagct ctcaacatca aatcaaccgc agattcacat tcatttagca attcaccaac
      121 gactgttgtt attgtcgtgt tttgatattc agctaatttg agtaatttct cgtgatattc
      181 aggtcgcact gataaaccaa ttctttttct agccatgtca ccaatcctat atatctgtga
      241 ccaataatac atgtaattaa aaaataatca aatatttacg tgtcggcata gccgaaaaaa
      301 acccgattac ggcaaagggg agctgtaatc agggaaagga aggtttgtaa tttttattgc
      361 gtcagttcga aagcactccg ctttctctga aagtgggtaa gtgcgccctt aggtgtttca
      421 ctgtttcact gtttcactgt ttcaatgttt caggttgtca gttgaccttg atctactaaa
      481 cattgccgta ttagttccat tggttttttg agtgtctgat cttctgcaac agcaaccagt
      541 aattcaccct gttttttctg ttttctgact gcatgccaca tttcaatatc taatttgaaa
      601 agcagctccg ccacgttatc ggtatcgtct acaatttcct gatcggtttt ttcttctgct
      661 ttgctaacca actttttaag accttttgac cagttcaact ggcgtgtgcc tttaaacgcg
      721 aaataataga gcttaaacag attcgcatct gctggatttt cttcttctga ataacttctt
      781 aaaatatcga acggagtacg gctattttct ttgccctttt taacatgtcc ctttgtcatt
      841 tcatgctcta agccccattt ggcaacgtag ctacctgcct tgttacctgc ttgcaaatct
      901 aatccgtgtt tttcgcttgg ttcatctaag cccgatttca aacaacaatc tttccagacg
      961 ttatacatat cctttttgat accaggtatt gaatctttgg taactgcata aggcacaaat
     1021 aacaaaacgt ggtaatgggg atgaaagcca ttagtaccgt gggtaatttc aaagcatgag
     1081 atatagtgtt ttatctgcca acgctcgaac atattctgtg aaaggcgaat acccttaaaa
     1141 aatctgccat aggctttttt gaggtctttt ttcagttgtt ttatgtcggt atctgaataa
     1201 tggggaacgg taagagtaag gagtaggaca gatccacctt gttttttcca ccaatccata
     1261 gcttctttga cttcacattt acgatgttct gaaataatcg aagcacaaac aggacagccc
     1321 cacgcatttg cacagcgcat gacgttcgta taattggctt ttttgcgtaa tttattaaat
     1381 gtgaccccta caccatcgtt tttatcgaca cggttataga aacagtgttg tgttctttct
     1441 ccatctaaga tttttcgggc tgattctagt aatttgaacc gttccttgat tgcctgaaag
     1501 ccttgtgtgg tgggaatgga ggagttatcc gtattattac caaggggctt caaattgcca
     1561 cgtccatctg tgacaaattg aatagatggg agtgcatcgc cccccgacgc ttgcgagccc
     1621 tcagccgtcc gcaggtgcga cgcactcaaa cctatttgat tttctacatt ttgaccgtac
     1681 aatgtatatc tcctatgtac ttgaccgtgc aaacaggatt ccgaagccct agtgattgcc
     1741 gtcactgggg ctttattatt attcctgctt taatttttct gatgcaatgc c
//
