LOCUS       NZ_CP034052             2058 bp    DNA     circular CON 26-NOV-2023
DEFINITION  Klebsiella pneumoniae strain KP_NORM_BLD_2014_104014 plasmid
            unnamed7, complete sequence.
ACCESSION   NZ_CP034052
VERSION     NZ_CP034052.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA5063299
            Assembly: GCF_003855315.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Klebsiella/Raoultella group; Klebsiella.
REFERENCE   1  (bases 1 to 2058)
  AUTHORS   Lam,M.C., Wyres,K.L., Wick,R., Judd,L.M., Fostervold,A., Holt,K.E.
            and Lohr,I.H.
  TITLE     Convergence of virulence and multidrug resistance in a single
            plasmid vector in multidrug-resistant Klebsiella pneumoniae ST15
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 2058)
  AUTHORS   Lam,M.C., Wyres,K.L., Wick,R., Judd,L.M., Fostervold,A., Holt,K.E.
            and Lohr,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (16-NOV-2018) Biochemistry and Molecular Biology,
            University of Melbourne, Flemington Road, Parkville, Victoria 3010,
            Australia
COMMENT     ##Genome-Assembly-Data-START##
            Assembly Method                   :: SPAdes v. 3.6.2
            Genome Representation             :: Full
            Expected Final Version            :: Yes
            Genome Coverage                   :: 250x
            Sequencing Technology             :: Illumina
            ##Genome-Assembly-Data-END##
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Date                   :: 11/26/2023 02:47:52
            Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline
            (PGAP)
            Annotation Method :: Best-placed reference protein set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,772
            CDSs (total)                      :: 5,646
            Genes (coding)                    :: 5,482
            CDSs (with protein)               :: 5,482
            Genes (RNA)                       :: 126
            rRNAs                             :: 9, 8, 8 (5S, 16S, 23S)
            complete rRNAs                    :: 9, 8, 8 (5S, 16S, 23S)
            tRNAs                             :: 89
            ncRNAs                            :: 12
            Pseudo Genes (total)              :: 164
            CDSs (without protein)            :: 164
            Pseudo Genes (ambiguous residues) :: 0 of 164
            Pseudo Genes (frameshifted)       :: 67 of 164
            Pseudo Genes (incomplete)         :: 96 of 164
            Pseudo Genes (internal stop)      :: 32 of 164
            Pseudo Genes (multiple problems)  :: 28 of 164
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
            REFSEQ INFORMATION: The reference sequence is identical to
            CP034052.1.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2058
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /strain="KP_NORM_BLD_2014_104014"
                     /isolation_source="Blood"
                     /host="Homo sapiens"
                     /db_xref="taxon:573"
                     /plasmid="unnamed7"
                     /geo_loc_name="Norway"
                     /collection_date="2014"
     gene            complement(join(1276..2058,1..207))
                     /locus_tag="EHF42_RS29595"
                     /old_locus_tag="EHF42_29595"
     CDS             complement(join(1276..2058,1..207))
                     /locus_tag="EHF42_RS29595"
                     /old_locus_tag="EHF42_29595"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001529700.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein rep"
                     /protein_id="WP_040207214.1"
                     /translation="MQNPELQNLTDYSPSDAPWDAHRSVSDDVGGIYLLAAEYERYGAR
                     MASCGGLLRFGWSTLKETGETRLRLREAHFCRVRHCPVCQWRRSLMWQARFYQSLPRIV
                     ADYPDSRWMFLTLTVRNCAIEELGETLSRMNTAFQRLKDRKEFRPVQGWIRTTEVTRGS
                     DGSAHPHFHTLMMVPPGMLNGKSYVRHERWVELWRECLRVSYDPNVDVRAVKPRKPKDG
                     ESLACATAELVRGAVAETLKYSTKPADMVADPKWFLELTRQTHKRRFVATGGALKDVLK
                     LDQETDADMVIGDDISEGDDDGSRIAFEWKTEVKKYRRSPTKDKTESD"
                     /name="protein rep"
     gene            complement(531..722)
                     /locus_tag="EHF42_RS29600"
                     /old_locus_tag="EHF42_29600"
     CDS             complement(531..722)
                     /locus_tag="EHF42_RS29600"
                     /old_locus_tag="EHF42_29600"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020324555.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="WP_020324555.1"
                     /translation="MIVRLDNRLFEILDEMGAHVDREMFMAAYAQRKAEKENDPRHIRQ
                     RKLTRLAHDLMSESDPEL"
                     /name="hypothetical protein"
     Typing          1359..1550
                     /name="ColpVC"
                     /typing="replicon"
                     /tool="MOB-suite"
                     /identity="98.446"
                     /coverage="100.0"
                     /evalue="2.86e-91"
ORIGIN
        1 cctcaggcgc gtttctccgg tttctttgag ggtagaccac ccaaacctca gtaaaccgcc
       61 acaggaggcc atacgcgccc cgtagcgctc atattcagcc gcaagcaggt aaatccctcc
      121 cacgtcgtca gaaacgcttc tgtgagcgtc ccacggcgca tctgaggggg agtagtcagt
      181 taggttctgg agttcaggat tttgcatgca caccgcccca tgctgggcga tggctcattt
      241 gacgtgttat cattgccata tcacctgtgt tgtcgtgtcc aaattcgaat tcctacaggt
      301 ggtcacaccc ccgaactgtt agcgcagttg cgggggtcgc ttttttctgc gaccactccc
      361 gacagaatac ttccaaaacc attttcaggc aaatcacact caaacccttg cggcacaagg
      421 gctggcggcg ttttttgacg ccagagttat cccttaagta taaatacaag gatcgcgcgc
      481 acgagactcc ggccattttc tgaccgattt ccctcgcgcg cacgcgaggc tcacaattca
      541 gggtccgatt ctgacatcaa atcatgagcc aacctggtca gtttccgttg acggatatgc
      601 cggggatcat tttctttttc ggccttccgc tgcgcatagg ccgccatgaa catttcccga
      661 tccacatgcg cacccatctc atcgagaatc tcaaacagcc ggttatccag tctgacgatc
      721 atgcctaccc cctcaaaaaa cgcttatcag gtggttgcgc tcactgcgtg atcacaacca
      781 ccccctgtaa gtattttacg ggtgctgtcg tcaatcacta aatcggaacc cactggcaag
      841 ccagcgggac cccgcgattt agcgtttgac gatttcggga acggcgaacg ctgacagatt
      901 ttaatctggc ggcgtgaggt gttggcaggg tgtcggggcg cagccctgac ggatcgtttt
      961 tggtaccggc atcgtgatgg cggtactcca aaaacacatc ttgtccgtta tcagtttttg
     1021 tttttcgtgg gcttgcccca ccgcgcgttt ctcatcgcca gatgagaaac tactaagcgc
     1081 gccttccgga aaattaccgg aagaaaaacc caggttcgga atccgaactc agtaatcgag
     1141 tgacgtcact ttgcggcgtt agccctatcc tgcatcggag taaaatcaat cggacaagat
     1201 gtgactttgg tacaccgcca ccaaggtgac ggatgcccaa agccctcatg gtcagggcgc
     1261 agccccgaca ccctgttagt ctgattcggt tttatctttc gtcggcgaac gccggtactt
     1321 tttgacctcg gtcttccact cgaacgcgat gcgggaaccg tcatcatcgc cctcggaaat
     1381 atcatccccg atcaccatgt cggcgtcggt ttcctgatcg agtttcagca cgtctttgag
     1441 tgcgccgccg gtcgccacaa agcggcgctt gtgcgtctgg cgggtcagtt cgaggaacca
     1501 tttaggatcg gccaccatgt cggccggctt cgtggaatat ttcagggttt cggccactgc
     1561 gccgcgcacc agttcggcgg tcgcgcaggc cagcgattcg ccgtccttcg gcttgcgggg
     1621 tttcactgcc cggacatcga cattcggatc gtaactgacc cgcaggcact cacgccacag
     1681 ctcaacccag cgttcatgcc tgacgtaact cttcccgtta agcatgcccg gcggaaccat
     1741 catcagggtg tggaagtgcg ggtgtgcgct gccgtcactg ccgcgggtga cttccgtggt
     1801 gcgtatccag ccctgaactg gtcggaactc tttacggtcc ttcagtcgct ggaaagccgt
     1861 gttcatccgg ctcagcgtct cgcccagctc ctcgatcgcg cagttgcgca cggtcagggt
     1921 cagaaacatc cagcgggaat cggggtaatc cgccacgata cgcggcaggg actggtagaa
     1981 acgggcttgc cacatcaggg agcgcctcca ctggcagaca ggacagtgcc ggacacggca
     2041 gaaatgcgcc tcacgcag
//
