LOCUS       NZ_CP032128             5433 bp    DNA     circular CON 26-NOV-2023
DEFINITION  Acinetobacter chinensis strain WCHAc010005 plasmid p2_010005,
            complete sequence.
ACCESSION   NZ_CP032128
VERSION     NZ_CP032128.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN07138949
            Assembly: GCF_002165375.2
KEYWORDS    RefSeq.
SOURCE      Acinetobacter chinensis
  ORGANISM  Acinetobacter chinensis
            Bacteria; Pseudomonadota; Gammaproteobacteria; Moraxellales;
            Moraxellaceae; Acinetobacter.
REFERENCE   1  (bases 1 to 5433)
  AUTHORS   Hu,Y., Long,H., Feng,Y. and Zong,Z.
  TITLE     The complete genome of Acinetobacter sp. strain WCHAc010005
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5433)
  AUTHORS   Hu,Y., Long,H., Feng,Y. and Zong,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (03-SEP-2018) Center of Infectious Diseases, West China
            Hospital, Sichuan University, Guoxuexiang 37, Chengdu, Sichuan
            610041, China
REFERENCE   3  (bases 1 to 5433)
  AUTHORS   Hu,Y., Feng,Y. and Zong,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAY-2017) Center of Infectious Diseases, West China
            Hospital, Sichuan University, Guoxuexiang 37, Chengdu, Sichuan
            610041, China
COMMENT     ##Genome-Assembly-Data-START##
            Assembly Method                   :: Unicycler v. 0.4.6
            Genome Representation             :: Full
            Expected Final Version            :: Yes
            Genome Coverage                   :: 200.0x
            Sequencing Technology             :: Illumina HiSeq; MinION
            ##Genome-Assembly-Data-END##
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Date                   :: 11/26/2023 02:09:03
            Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline
            (PGAP)
            Annotation Method :: Best-placed reference protein set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,604
            CDSs (total)                      :: 3,496
            Genes (coding)                    :: 3,440
            CDSs (with protein)               :: 3,440
            Genes (RNA)                       :: 108
            rRNAs                             :: 7, 7, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 7, 7, 7 (5S, 16S, 23S)
            tRNAs                             :: 83
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 56
            CDSs (without protein)            :: 56
            Pseudo Genes (ambiguous residues) :: 0 of 56
            Pseudo Genes (frameshifted)       :: 13 of 56
            Pseudo Genes (incomplete)         :: 43 of 56
            Pseudo Genes (internal stop)      :: 10 of 56
            Pseudo Genes (multiple problems)  :: 10 of 56
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
            REFSEQ INFORMATION: The reference sequence is identical to
            CP032128.1.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..5433
                     /organism="Acinetobacter chinensis"
                     /mol_type="genomic DNA"
                     /strain="WCHAc010005"
                     /isolation_source="Sewage"
                     /type_material="type strain of Acinetobacter chinensis"
                     /db_xref="taxon:2004650"
                     /plasmid="p2_010005"
                     /geo_loc_name="China: Sichuan, Chengdu"
                     /collection_date="2015-10-31"
     gene            136..411
                     /locus_tag="CDG60_RS00120"
                     /old_locus_tag="CDG60_00120"
     CDS             136..411
                     /locus_tag="CDG60_RS00120"
                     /old_locus_tag="CDG60_00120"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004728109.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="WP_004919011.1"
                     /translation="MKIESLEQQISKQQERLKQLKAQKQAAVARERSKQKELERKNDTR
                     RKILIGSCMLKIVENDTVAHEKLMAQLDKYLTENRDRELFNLPLKE"
                     /name="hypothetical protein"
     gene            415..1203
                     /locus_tag="CDG60_RS00125"
                     /old_locus_tag="CDG60_00125"
     CDS             415..1203
                     /locus_tag="CDG60_RS00125"
                     /old_locus_tag="CDG60_00125"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_004997324.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ANT(3'')-II family aminoglycoside
                     nucleotidyltransferase"
                     /protein_id="WP_005071978.1"
                     /translation="MPDLIQLEYLQEKLQQLLAESLFAIYLYGSAVDGGLGPESDLDVL
                     VVVTQPLTSALREQLAQELLKISQPVGELQRPLEVTILLKDEIQSGIYPLSYEMQFGEW
                     LREELKEGGILSSQKDPDISILLRKARSHHTVLFGPALNQWAPEISDQELWQAMSDTYP
                     EIVAHWDEDADERNQILALCRIYFSLVMKDIASKDNAARWVMSQLSDEQKFVLQRLIQE
                     YRGEIGKQNWQEEHYALQPIVNFLSSKIEEQFEQKRNLIT"
                     /name="ANT(3'')-II family aminoglycoside
                     nucleotidyltransferase"
     gene            1225..2130
                     /gene="trbL"
                     /locus_tag="CDG60_RS00130"
                     /old_locus_tag="CDG60_00130"
     CDS             1225..2130
                     /gene="trbL"
                     /locus_tag="CDG60_RS00130"
                     /old_locus_tag="CDG60_00130"
                     /inference="COORDINATES: protein motif:HMM:TIGR02783.1"
                     /GO_process="GO:0009291 - unidirectional conjugation
                     [Evidence IEA]"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="P-type conjugative transfer protein TrbL"
                     /protein_id="WP_204832353.1"
                     /translation="MSWLLMNSATFAEAIVNSFRQAASTASGYSLLTPSDFFVNGWKIV
                     QEILNSVSAWSPIDSLGMLIASIIIMIAFALICAFLVLALVEMYIVVSASVLMMGFAGS
                     QWTKDYALKTIQYAVSVGAKIFILQLIAGLGLTFIQEWATGFNVEDNVSLVGMIGCSVV
                     LLALTKIVPDMLQGVINGSSIGSGAALTSALRAVAAATAGAAAGAAGASMATKGAGALA
                     SEQLKTAQATGTGPSSAMGKAGFMAGNMAMNMSSALKSDLGSRLSGSTTGGRMAGSMMN
                     KANELRSKRSKSNQDENTIS"
                     /name="trbL"
     gene            complement(2152..2385)
                     /locus_tag="CDG60_RS00135"
                     /old_locus_tag="CDG60_00135"
     CDS             complement(2152..2385)
                     /locus_tag="CDG60_RS00135"
                     /old_locus_tag="CDG60_00135"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004918992.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="WP_087514467.1"
                     /translation="MTDLSKLSETELLAIWNKDNFGLKGQLYKLEQEYIEAKEILDNRQ
                     NKDHPLYERHQSCVDGLITRIERIKQQLNKCE"
                     /name="hypothetical protein"
     gene            complement(2401..3339)
                     /gene="repM"
                     /locus_tag="CDG60_RS00140"
                     /old_locus_tag="CDG60_00140"
     CDS             complement(2401..3339)
                     /gene="repM"
                     /locus_tag="CDG60_RS00140"
                     /old_locus_tag="CDG60_00140"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005404815.1"
                     /GO_function="GO:0003887 - DNA-directed DNA polymerase
                     activity [Evidence IEA]"
                     /GO_process="GO:0006270 - DNA replication initiation
                     [Evidence IEA]"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="replication initiation protein RepM"
                     /protein_id="WP_065996348.1"
                     /translation="MKKDLVVKDNALINASYNLDLAEQRLILLAILEARESNIPSDRDL
                     TIHAESYINHFNVHRNTAYKVLKDACKNLFERRFSYQKLTAKGNLENVMSRWVQRVSYV
                     ENEALVRIRFSDDVVPLITNLEKHFTSYELEQVSSLTSAYAIRLYELLIAWRSTGKVSM
                     LETKELRSRLGVLDTEHQRMESFKRRVLEPAIQQINDHTDIKAEYEQHKRGRSIIGFSF
                     SFKQKSKPKTINHERDPSTVDMFCNLSDSQINTYSSVLSKVHSISDLAGNKDYQAFAIW
                     IANILRDPSSVREETAKRIFKALRTETDFKG"
                     /name="repM"
     gene            complement(3941..5359)
                     /gene="mobQ"
                     /locus_tag="CDG60_RS00145"
                     /old_locus_tag="CDG60_00145"
     CDS             complement(3941..5359)
                     /gene="mobQ"
                     /locus_tag="CDG60_RS00145"
                     /old_locus_tag="CDG60_00145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004919014.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MobQ family relaxase"
                     /protein_id="WP_065996350.1"
                     /translation="MAIFHFSVKNISRSDGRSAVACAAYRSGEKLKDERYGKEQDYTKK
                     TGIEFKNIYAPENTKKELLDRETLWNTVETIETRKNSQLSREFEVAFPCELNQEQREKM
                     LNELCGKIVERHKVVVDAVIHAPHTAGGSDDRNYHAHIMLTTRSINQQGDLDKKTREFN
                     DNGKQEVEHWRQQFAELCNQFLEQVGSHERVDHRSYKEQGLDLEATQHEGSTITQLRRQ
                     GKDTEISLSNDAIKARNTERQLIKGLEQEILATERLVHDLEQTRENLDQEQRQKEKDQE
                     QRSPEELTKIAYSVISQYNDAIATEAKNIASSIQKTEIEQINAVLEQIELSKSDIKHQK
                     EELGKRPLFFGGKWDTANAEIQKQLNQLEEQERELRNNSPRFEPERYTDRAKLTVNKAN
                     PNLKAKYDRARNYLEREQQRKLAEQEKRKQEAKAIQEQEKQAFFARKALREQGKHEEAN
                     KMLEAEKRNRPRSR"
                     /name="mobQ"
     ARG             416..1200
                     /name="ant(3'')-IIa"
                     /gene="ant(3'')-IIa"
                     /gene_name="aminoglycoside nucleotidyltransferase
                     ANT(3'')-IIa"
                     /tool="amrfinderplus"
                     /drug_class="AMINOGLYCOSIDE"
                     /identity="98.47"
                     /coverage="100.0"
     Typing          complement(3945..5374)
                     /name="MOBQ"
                     /typing="relaxase"
                     /tool="MOB-suite"
                     /identity="100.0"
                     /coverage="100.0"
                     /evalue="0.0"
ORIGIN
        1 tacgcactcc aaactttagt ttgggaaagt gcgcccttcg ggaaaaccca caacaatcat
       61 atagcaactt gaaagcaatg ttcaagtgcg cttatgattt agggggattt cctctatttg
      121 aaaggtatgt taaagatgaa aattgagtca ttggaacaac aaatttctaa gcaacaagag
      181 cggttaaaac agttaaaagc tcaaaaacaa gctgctgtag ctcgtgaacg ttctaagcaa
      241 aaagagttag aacgaaagaa tgatacaaga cgtaagattt taatcggctc ttgtatgtta
      301 aaaatcgtcg aaaatgacac tgttgctcat gaaaagttaa tggctcaact cgataaatac
      361 ttaaccgaaa atcgagatag agaattattt aatcttccat taaaggagtg agtgatgcct
      421 gatttaattc agttagaata tctacaagaa aaattacagc agcttttagc ggaatcatta
      481 tttgcaattt atctttatgg ttcagctgtt gacggtggtt tagggccaga aagtgatctt
      541 gatgtactgg tcgtggtcac tcaaccatta acttctgctt tacgtgagca gcttgcacaa
      601 gaattactaa aaatttcaca gcctgttggg gaattacaaa ggccattaga agttactatt
      661 ttattaaaag atgagattca gtctggaatt tatcctttaa gttatgaaat gcaatttggt
      721 gaatggctgc gtgaagagct taaagaaggt ggaatattga gctcacagaa agacccagat
      781 attagtatat tgcttagaaa agcgagatct catcatacag ttttatttgg gccagcttta
      841 aaccaatggg cacctgaaat ttctgatcaa gaactatggc aagcaatgtc tgacacttat
      901 cccgaaattg tagcgcattg ggatgaggat gcagatgaaa gaaaccagat tttagcttta
      961 tgccggatct attttagttt agtgatgaag gatattgctt caaaagacaa tgctgcacga
     1021 tgggttatgt ctcagctttc tgatgagcag aaattcgtat tgcagcgact tatacaggaa
     1081 tatagagggg aaatcggcaa acaaaattgg caagaggagc attatgcttt gcagcctatt
     1141 gtcaattttt tgagttcaaa aattgaagag cagtttgagc agaaaagaaa tctgatcaca
     1201 taataatttt ttgattctgg ctttatgtca tggcttttga tgaactcagc aacgttcgct
     1261 gaagcgattg taaatagctt caggcaggct gcatctaccg ccagtggcta cagtctgctt
     1321 acaccctcag atttttttgt gaacggctgg aagatcgtcc aagagatttt aaactcggta
     1381 agtgcttggt cgcctattga ttcattgggg atgctgattg cttcaatcat tatcatgatt
     1441 gcatttgcct tgatttgtgc gttcttggtt ttggcgttgg ttgaaatgta tatcgtggtg
     1501 tcagctagtg tcttaatgat ggggtttgca ggttcgcaat ggacgaaaga ctatgccttg
     1561 aaaactattc aatatgctgt ttcagtcggt gcaaaaatat ttatcttaca attgattgca
     1621 ggtcttggac ttacttttat ccaagagtgg gctacgggct ttaatgttga agacaatgta
     1681 agtttggtcg gtatgattgg ctgtagtgtg gtactgctgg cattaaccaa aattgtgcct
     1741 gatatgctcc aaggtgtgat taacggttca tctattggaa gtggtgctgc tttaacttct
     1801 gccctacgtg ctgtggctgc tgcgacagct ggcgctgctg ctggtgcagc tggtgcgtct
     1861 atggctacaa aaggcgctgg agcgttggca agtgaacagc ttaaaacggc tcaagcaact
     1921 ggcacaggcc catcgagtgc aatgggtaaa gctggtttta tggctggtaa tatggccatg
     1981 aatatgagtt ctgctttaaa aagtgacctt ggtagtcgtt taagtggttc tacgactggt
     2041 ggacgtatgg ctggctcgat gatgaataaa gcaaacgagc tacggtcaaa acgatctaaa
     2101 agcaatcagg atgaaaacac tatctcatag ggcgagacag attttttctg attattcgca
     2161 tttgtttagt tgttgtttta tacgctcaat ccttgtaata agaccatcca cacaactttg
     2221 atgacgttca taaagtgggt ggtctttatt ctgccggtta tccaatattt ctttggcttc
     2281 gatgtactct tgttctagtt tgtatagttg acctttcagt ccaaaattat ctttattcca
     2341 gatagctaat agctcggttt cacttagttt tgataaatca gtcattagta atactcccat
     2401 ttaaccttta aaatctgttt ctgttcgcaa tgccttgaat atgcgttttg ccgtttcttc
     2461 tcgcacactg gacgggtcac gtaaaatatt ggcaatccat attgcaaatg cttgatagtc
     2521 cttattccct gctaggtcgc tgatactgtg gactttagac aatactgagc tataagtatt
     2581 tatctgactg tctgacaagt tgcagaacat atcaaccgtg cttggatctc gttcatggtt
     2641 gattgtttta ggcttggatt tctgtttaaa gctgaatgaa aacccaatga ttgaacgtcc
     2701 tcgcttatgt tgctcgtatt ctgccttaat gtcggtatgg tcgttaattt gttgaatagc
     2761 aggctctaat actcgtcttt taaacgattc catccgttga tgctctgtgt ccaatacacc
     2821 aagtcttgac ctcaattcct tagtttcaag cattgatact ttcccagtgc tacgccatgc
     2881 aattagtagt tcatataaac gtatggcata ggcactcgtt aggctactta cctgctccag
     2941 ttcataactg gtgaaatgct tctctaggtt ggtgatcagt ggcacaacat catctgaaaa
     3001 cctgatacgg acaagggctt cattttcaac ataggacaca cgctgtaccc atcggctcat
     3061 aacattctca agattgcctt tagccgttaa tttttggtaa ctaaagcgac gctcaaacaa
     3121 gtttttgcaa gcatccttta agactttgta ggcggtgttt ctatggacat tgaaatggtt
     3181 aatgtagctt tctgcatgga tagttaaatc acggtcacta gggatattag actccctcgc
     3241 ctccagtatt gctaaaagga ttaggcgttg ttctgcaagg tctaaattat aactggcatt
     3301 gatcagcgca ttatccttaa cgactaggtc ttttttcata catagcaact tattcgaatt
     3361 ttgttgttat agcaacatta tataacaatg ttgtaatatg caagataaac gttgctatat
     3421 tgcaagataa acgttgctat attgcaagat aaacgttgct atattgcaag ataaacgttg
     3481 ctatataaag tctgaaacca ttgctatata aggatttcag tcaccctaaa aattaaaaaa
     3541 aataaaaaaa ttaaaaaaga ggggaggggt caaaattgcc ctatgtactc gctaaagctc
     3601 gtactttatt gaagctcgca agctcgcttc gaggggcaat ttttcggtta atcctgtttg
     3661 tgaaatctaa aagcaaaagc aactatgaat tcgcttcgct cataaggctt tatgctcgct
     3721 tcgctcggtc taggtgcaga tttcaacatg aaaatataga ttttctaggg ttcaagtcat
     3781 ttaaaagcgg tttttcagag ggtcgagggt cgaatattgc tagttcgctc gtagacactc
     3841 gctctgtaaa accatgtatt gtttagataa ttttaataaa caccaaaaag aataggtata
     3901 tctatggtgc aaaatcatat attttgcacc atagatatac ctatcttgaa cgtggtctat
     3961 tccgcttttc ggcttcaagc atcttgttgg cttcttcatg cttaccttgt tcacgcaagg
     4021 ctttacgtgc aaaaaatgcc tgtttttctt gttcttgtat ggctttggct tcttgttttc
     4081 gtttttcctg ttcggctaac ttccgttgtt gttctcgctc aagataattt cttgctcggt
     4141 catatttagc ttttaggttt ggattagcct tgtttacagt cagttttgcc cgatctgtat
     4201 agcgttcagg ctcaaatcga ggggagttat tcctcaattc tcgttcttgt tcttccagct
     4261 ggttcaactg cttctgaatt tcagcatttg ctgtatccca ttttccgcca aaaaacaggg
     4321 gtctttttcc tagttcttct ttttggtgtt taatatcgct tttagatagc tctatttgct
     4381 ccaaaacagc gtttatttgc tcgatttctg ttttttggat agatgacgct atgtttttcg
     4441 cttctgtggc tatagcgtcg ttatattgcg aaataacgct atatgcaatt ttggttaatt
     4501 cttcagggga acgttgttcc tggtcttttt ctttttggcg ttgttcctgg tctaaatttt
     4561 ccctggtctg ttccaagtca tgaacaaggc gttctgtggc taaaatttct tgctcaagtc
     4621 ctttaattaa ttggcgttct gtatttctag ccttaatcgc atcgttactt aaactgattt
     4681 cagtgtcctt gccctgtctg cgaagttggg taattgtaga accctcatgc tgtgtggctt
     4741 ctaaatctaa accttgctct ttgtagctgc ggtgatcgac acgctcatgg ctgccaacct
     4801 gttcaagaaa ttgattgcag agttccgcaa actgttgtct ccagtgttcg acttcttgtt
     4861 tgccgttgtc gttaaattct ctcgtttttt tatcaaggtc gccttgttgg ttaatgctgc
     4921 gtgtagtgag catgatgtgg gcgtgatagt tgcggtcatc acttccgcct gcggtatgtg
     4981 gggcatgaat gactgcatca acaacgacct tatgacgttc tacaattttt ccgcatagct
     5041 cattgagcat cttctctcgt tgttcttggt ttaattcaca aggaaatgca acttcaaatt
     5101 ctcttgataa ttgagagttt tttctagttt caatggtttc gaccgtattc caaagcgttt
     5161 cccgatctaa taattctttt ttggtgtttt caggcgcata gatattttta aattctatgc
     5221 ctgttttctt cgtgtaatcc tgctcttttc catagcgttc atctttcaat ttttcccctg
     5281 atctatatgc agcacacgca acagcacttc gaccatctga tcgactaata ttttttactg
     5341 aaaagtgaaa aatagccacg atgtaaagtc ccattgacaa gtgtttttaa aaaaaaattg
     5401 aaaatttttt ttcggggtta aggggtgtcc cct
//
