LOCUS       NZ_CP018439             1933 bp    DNA     circular CON 05-MAR-2024
DEFINITION  Klebsiella pneumoniae strain Kp_Goe_822917 plasmid pKp_Goe_917-8,
            complete sequence.
ACCESSION   NZ_CP018439
VERSION     NZ_CP018439.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN05412453
            Assembly: GCF_001902415.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Klebsiella/Raoultella group; Klebsiella.
REFERENCE   1  (bases 1 to 1933)
  AUTHORS   Bohne,W., Bunk,B., Overmann,J., Gross,U. and Zautner,A.E.
  TITLE     A nosocomial outbreak of oxa48-expressing Klebsialla pneumoniae in
            Lower Saxony
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 1933)
  AUTHORS   Bohne,W., Bunk,B., Overmann,J., Gross,U. and Zautner,A.E.
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2016) Department for Medical Microbiology,
            University Medical Center Goettingen, Kreuzbergring 57, Goettingen,
            Niedersachsen 37075, Germany
COMMENT     ##Genome-Assembly-Data-START##
            Assembly Date                     :: 2016
            Assembly Method                   :: SMRT Analysis Software v. 2.3.0
            Genome Coverage                   :: 117.0x
            Sequencing Technology             :: PacBio
            ##Genome-Assembly-Data-END##
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Date                   :: 03/04/2024 14:52:52
            Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline
            (PGAP)
            Annotation Method :: Best-placed reference protein set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,540
            CDSs (total)                      :: 5,416
            Genes (coding)                    :: 5,303
            CDSs (with protein)               :: 5,303
            Genes (RNA)                       :: 124
            rRNAs                             :: 9, 8, 8 (5S, 16S, 23S)
            complete rRNAs                    :: 9, 8, 8 (5S, 16S, 23S)
            tRNAs                             :: 87
            ncRNAs                            :: 12
            Pseudo Genes (total)              :: 113
            CDSs (without protein)            :: 113
            Pseudo Genes (ambiguous residues) :: 0 of 113
            Pseudo Genes (frameshifted)       :: 44 of 113
            Pseudo Genes (incomplete)         :: 69 of 113
            Pseudo Genes (internal stop)      :: 15 of 113
            Pseudo Genes (multiple problems)  :: 15 of 113
            ##Genome-Annotation-Data-END##
            REFSEQ INFORMATION: The reference sequence is identical to
            CP018439.1.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            This genome has a base modification file available.
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1933
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /strain="Kp_Goe_822917"
                     /isolation_source="skin swab"
                     /host="Homo sapiens"
                     /culture_collection="DSM:103702"
                     /db_xref="taxon:573"
                     /plasmid="pKp_Goe_917-8"
                     /geo_loc_name="Germany: Goettingen"
                     /lat_lon="51.53919016 N 9.91156249 E"
                     /collection_date="2013-03-12"
                     /collected_by="Andreas Erich Zautner"
                     /genotype="MLST ST11"
     gene            join(1903..1933,1..956)
                     /locus_tag="BB746_RS27700"
                     /old_locus_tag="BB746_27510"
     CDS             join(1903..1933,1..956)
                     /locus_tag="BB746_RS27700"
                     /old_locus_tag="BB746_27510"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001529700.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein rep"
                     /protein_id="WP_016245711.1"
                     /translation="MQNPKLQNLTDYSPSDAPWDAHKSVSDDVGGIYLLAAEYERYGAR
                     MASCGGLLRFGWSTLKETGETRLRLREAHFCRVRHCPVCQWRRSLMWQARFYQSLPRIV
                     ADYPDARWMFLTLTVRNCAIGELGETLNRMNMAFQRLKDRKEFRPVQGWIRTTEVTRGS
                     DGSAHPHFHTLMMVPPSMFTRDYVKHDRWVELWRECLRVNYDPNVDVRAVKPRKPKDGE
                     SLASATAELVRGAVAETLKYSTKPADMVADPEWFLELTKQTHKRRFVATGGALKDILKL
                     DQETDADMVIGDDIPEGDDDGSRIAFEWKTESKKYRRSPSKDKAESD"
                     /name="protein rep"
     Typing          complement(683..871)
                     /name="ColpVC"
                     /typing="replicon"
                     /tool="MOB-suite"
                     /identity="88.947"
                     /coverage="98.0"
                     /evalue="1.39e-59"
ORIGIN
        1 attactcccc ctcagacgcg ccctgggacg ctcacaaaag cgtttctgac gacgtaggtg
       61 ggatttacct tctcgcagcc gaatatgagc gctacggggc gcgtatggct tcctgtggcg
      121 gtttactgag gtttggttgg tctaccctca aagaaactgg agaaactcgc cttaggctac
      181 gtgaggcgca tttctgtcgt gtccggcact gtcctgtctg ccagtggagg cgatccctga
      241 tgtggcaagc ccgtttttat cagtccctgc cgcgtattgt tgcggattat ccagatgcac
      301 gctggatgtt cctgaccctc acagtgcgaa actgcgcgat cggggaattg ggtgagacac
      361 ttaaccgaat gaacatggcc ttccagcgac ttaaggatcg caaagagttt cgacctgttc
      421 agggctggat ccgcaccacg gaagttacac gtggaagtga cggtagtgcg cacccgcact
      481 ttcacactct gatgatggtt cctccctcaa tgttcacgcg agattacgtt aaacatgacc
      541 gctgggtaga gctttggcga gagtgtttgc gtgtgaatta cgatccgaat gttgatgttc
      601 gagcagtaaa accccgcaag cctaaggacg gagaatcatt ggcttctgca actgcggaac
      661 ttgtacgggg cgcagtggct gaaaccctga aatattccac gaagccggct gacatggttg
      721 ctgatcctga atggttcctc gaattgacta agcagacaca taagcgccga tttgtggcta
      781 ccggtggcgc actcaaagac atactgaaac tcgatcagga aactgatgcc gatatggtaa
      841 tcggggatga tattcccgaa ggcgatgatg atggttcacg cattgctttt gagtggaaaa
      901 ccgaatccaa aaagtaccgt cgctcaccgt caaaagataa agctgaatca gactgacagg
      961 gtgtcggggc gcagccctga ccacgacgtt tttgagagga cgccgcttgt cggcggtact
     1021 ccaaaaacac atcttgtcct attggttcta ctccgatgca ggatagggct aacgccgcaa
     1081 agtgacgtca ctcaattact gagttcggtt tccgaactca gttgggacaa gatgtgtttt
     1141 tggtacaccg ccatcacgat gtcggtgcca aaacgattcg tcagggctgc gccccgacac
     1201 cctgccaaca cctcacgcag tcagattaaa atctgccagc gctcgctgtt tccgaaatcg
     1261 tcaaactcta aatcgtgggg tcccgctggc ttgccagtgg gttccgattt agtgattgac
     1321 gacattgctg attgaaaaat tggctgaggt ggttggattc acgaagtgag gccaaccacc
     1381 tggaagacgg tttttaattg tctggtaccg gatacaacca gaacgaatgg agttggttct
     1441 gtcgtgatgc gaaaaagtat gggttcgcaa atcacagact aaatagattt acccaattcc
     1501 attcgagtga ggttgttatg ttttttgagg ttcttaatca tgttgatagt gcgttgagcg
     1561 ttgctgtttc gctcctggcg ttgtggcagt ttttggtggc gggtgggcgt tgaatggctg
     1621 gttcgatccg cgcgcgatcc ttgtatttat acttaaggga taactctggc gataaaaaat
     1681 ggcatcaagc cttgcgtacc aaggcttcgg ggcttatttg cgttgtagaa ggttttggaa
     1741 gtattctgtt gggagtggtc gccttaaaag cgacccccgc aacgacggcc atcgttcggg
     1801 ggtgtgacca cctgcagaaa ttcgattcga agcgacaacc aacaggtgat acggcaatga
     1861 taacacgtca aatgagccat cgcccagcat gggacggtgt gcatgcaaaa ccctaaactc
     1921 cagaacctca cgg
//
