LOCUS       NZ_CP011585             1919 bp    DNA     circular CON 01-FEB-2024
DEFINITION  Enterobacter asburiae strain CAV1043 plasmid pCAV1043-1919, complete
            sequence.
ACCESSION   NZ_CP011585
VERSION     NZ_CP011585.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN03733641
            Assembly: GCF_001022095.1
KEYWORDS    RefSeq.
SOURCE      Enterobacter asburiae
  ORGANISM  Enterobacter asburiae
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Enterobacter; Enterobacter cloacae complex.
REFERENCE   1  (bases 1 to 1919)
  AUTHORS   Sheppard,A.E., Stoesser,N., Wilson,D., Sebra,R., Kasarskis,A.,
            Anson,L., Giess,A., Pankhurst,L., Vaughan,A., Grim,C.J., Cox,H.,
            Yeh,A., Sifri,C.D., Walker,S., Peto,T.E., Crook,D.W. and
            Mathers,A.J.
  TITLE     Rapid spread of a carbapenem resistance gene driven by multiple
            levels of genetic mobility
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 1919)
  AUTHORS   Sheppard,A.E., Stoesser,N., Wilson,D., Sebra,R., Kasarskis,A.,
            Anson,L., Giess,A., Pankhurst,L., Vaughan,A., Grim,C.J., Cox,H.,
            Yeh,A., Sifri,C.D., Walker,S., Peto,T.E., Crook,D.W. and
            Mathers,A.J.
  TITLE     Direct Submission
  JOURNAL   Submitted (02-JUN-2015) University of Oxford, John Radcliffe
            Hospital, Oxford OX39DU, United Kingdom
COMMENT     ##Genome-Assembly-Data-START##
            Assembly Method                   :: HGAP3 v. 2.2.0
            Genome Coverage                   :: 101X
            Sequencing Technology             :: PacBio
            ##Genome-Assembly-Data-END##
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Date                   :: 02/01/2024 03:07:14
            Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline
            (PGAP)
            Annotation Method :: Best-placed reference protein set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,932
            CDSs (total)                      :: 4,817
            Genes (coding)                    :: 4,660
            CDSs (with protein)               :: 4,660
            Genes (RNA)                       :: 115
            rRNAs                             :: 9, 8, 8 (5S, 16S, 23S)
            complete rRNAs                    :: 9, 8, 8 (5S, 16S, 23S)
            tRNAs                             :: 83
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 157
            CDSs (without protein)            :: 157
            Pseudo Genes (ambiguous residues) :: 0 of 157
            Pseudo Genes (frameshifted)       :: 31 of 157
            Pseudo Genes (incomplete)         :: 121 of 157
            Pseudo Genes (internal stop)      :: 17 of 157
            Pseudo Genes (multiple problems)  :: 12 of 157
            Pseudo Genes (short protein)      :: 1 of 157
            ##Genome-Annotation-Data-END##
            REFSEQ INFORMATION: The reference sequence is identical to
            CP011585.1.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1919
                     /organism="Enterobacter asburiae"
                     /mol_type="genomic DNA"
                     /strain="CAV1043"
                     /host="Homo sapiens"
                     /db_xref="taxon:61645"
                     /plasmid="pCAV1043-1919"
                     /geo_loc_name="USA:Virginia"
                     /lat_lon="38.14 N 78.45 W"
                     /collection_date="2008-03"
                     /collected_by="Clinical Microbiology University of Virginia
                     Health System"
     gene            complement(74..310)
                     /locus_tag="AB190_RS00005"
                     /old_locus_tag="AB190_00005"
     CDS             complement(74..310)
                     /locus_tag="AB190_RS00005"
                     /old_locus_tag="AB190_00005"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001676031.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="WP_001676031.1"
                     /translation="MNRLTNLTPAEKKFLDDAIAAAERASGKKLNQPNRHIVLNRARAQ
                     IESQRYADRQRALREDERQQSEFAWSRPRAPRR"
                     /name="hypothetical protein"
     gene            complement(1585..1767)
                     /locus_tag="AB190_RS00010"
                     /old_locus_tag="AB190_00010"
     CDS             complement(1585..1767)
                     /locus_tag="AB190_RS00010"
                     /old_locus_tag="AB190_00010"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="WP_016265984.1"
                     /translation="MLTFIGVVVVAVIAFKLFMLFFSSSESAVERATRKYMENPTSANY
                     KIMVATRMRNEKKRG"
                     /name="hypothetical protein"
     Typing          complement(475..648)
                     /name="MOBP"
                     /typing="oriT"
                     /tool="MOB-suite"
                     /identity="98.857"
                     /coverage="100.0"
                     /evalue="5.54e-83"
     Typing          615..1136
                     /name="rep_cluster_2335"
                     /typing="replicon"
                     /tool="MOB-suite"
                     /identity="93.308"
                     /coverage="99.0"
                     /evalue="0.0"
ORIGIN
        1 gcatggctat gcacgcgggt gaatggcaga cgatttcgga gtgtcagcac cactaaaccg
       61 ccaaaaggcg caatcagcgg cgcggcgcgc gcggacgtga ccaggcaaac tcggactgct
      121 gccgctcatc ctcacgtaat gcacgctggc ggtcggcgta acgctgcgac tcaatctgcg
      181 cacgcgctct gttcaggacg atatgccggt tcggctgatt tagctttttg cctgacgctc
      241 tctcagctgc ggcaatagca tcatcaagaa attttttctc tgcaggtgtc aggtttgtca
      301 gtctgttcat agcattctcc cgtcagaata actccgcaca gtctgccaga cacagcagaa
      361 ccgatgaagc gctggcggtg ctgaaagaca gccagaaacg gtgaacggga gcggatttta
      421 atccggtgac gtgagacgtt gggcaagccg caggcgcggc agtggtttta gcgggtttcg
      481 gggcgcagcc ctgaaccagt cacgcagcgc tagcggagtg tatactggct tactatgttg
      541 gcacggatga gggtgtcagt gaagtgcttc atgtggcagg agaaaaaagg cggcaccggc
      601 gcgtcagcag aatatgtgat acaggatata ttccgcttcc tcgctcactg actcgctacg
      661 ctcggtcgtt cgactgcggc gagcggaaat ggcttacgaa cggggcggag atttcctgga
      721 ggatgccagg aagagactta acagggaagc gatagggccg cggcgaagcc gtttttccat
      781 aggctccgcc cccctgacaa gcatcacgaa acctgacgct caaatcagtg gtggcgaaac
      841 ccgacaggac tataaagata ccaggcgttt ccccctggcg gctccctcgt gcgctctcct
      901 gttcctgcct ttcggtttac cggtgtcatt ccgctgttat ggccgcgttt atctcattcc
      961 acgcctgaca ctcagttccg ggtaggcagt tcgctccaag ctggactgta tgcacaaacc
     1021 ccccgttcag tccgactgct gcgccttacc cggtaactat catcttgagt ccaacccgag
     1081 aaagcacgac aaagcgccac tggcagcagc cactggtaac tgggatatac gagagagaga
     1141 ttcagaggtc ttgaagtatg ggcctgactg cggctacact gaaagaacag tttcggtatc
     1201 tgcggtctcg tatacccagt tacctggtta agcagttccc caactgactt aaccttcgat
     1261 caaaccacct ccccaggtgg ttttttcgtt ttcagagcaa gagattacga ctgaaacgac
     1321 aggatcacaa gaagatcatt aactccgaga gtagtaaccc ccaccatgtt tgcctatcaa
     1381 cacacttagg aaacattact tgcgtttagt tatacgactt ctagctctcc ataacagatc
     1441 ctcattttct gctgatggat ttcgacggta tcgttcctcc gctttccgta ctccatattc
     1501 aggaaacacc ctgacagcaa ccatttgtat aaagacataa cacaccaaaa gcaaaaataa
     1561 aaaaccaata aactcaaaca tatatcaccc tcttttcttc tcatttctca tgcgtgtagc
     1621 caccattatt ttatagttag cactcgtagg gttctccata tatttacggg tagcacgttc
     1681 gacggcagat tcggatgaac taaaaaaaag cataaataat ttaaatgcaa taacggcgac
     1741 taccactaca ccaataaatg taagcatcac tcttactcct gttatcaaca ttaaacataa
     1801 catccgttgg ccgcaccgcc tcaaacgccc tcagcgcgtt tctgaggcct ccggcctgaa
     1861 acatacacct ttctgtgccc atatcgagaa aaaacgcccc tgatgatttc tgcgtacct
//
