LOCUS       NC_023901               2683 bp    DNA     circular CON 06-JUN-2024
DEFINITION  Morganella morganii plasmid pM60, complete sequence.
ACCESSION   NC_023901
VERSION     NC_023901.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN14226032
KEYWORDS    RefSeq.
SOURCE      Morganella morganii (Proteus morganii)
  ORGANISM  Morganella morganii
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Morganellaceae; Morganella.
REFERENCE   1  (bases 1 to 2683)
  AUTHORS   Zhang,X., Zhou,T., Wu,Q., Zhang,Y. and Ye,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-NOV-2013) School of Medical Lab Science, School of
            Laboratory Medicine and Life Science, Wenzhou Medical University,
            Chashan Town, Ouhai District, Wenzhou, Zhejiang 325005, China
COMMENT     ##Genome-Annotation-Data-START##
            Annotation Provider          :: NCBI RefSeq
            Annotation Name              :: GCF_009962195.2-RS_2024_06_06
            Annotation Date              :: 06/06/2024 01:02:03
            Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline
            (PGAP)
            Annotation Method :: Best-placed reference protein set; GeneMarkS-2+
            Annotation Software revision :: 6.7
            Features Annotated           :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                :: 2
            CDSs (total)                 :: 2
            Genes (coding)               :: 2
            CDSs (with protein)          :: 2
            Genes (RNA)                  :: 0
            tRNAs                        :: 0
            ncRNAs                       :: 0
            Pseudo Genes (total)         :: 0
            CDSs (without protein)       :: 0
            ##Genome-Annotation-Data-END##
            REFSEQ INFORMATION: The reference sequence is identical to
            KF813021.1.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2683
                     /organism="Morganella morganii"
                     /mol_type="genomic DNA"
                     /strain="M60"
                     /isolation_source="urine"
                     /db_xref="taxon:582"
                     /plasmid="pM60"
                     /geo_loc_name="China: Wenzhou"
                     /collected_by="Qing Wu"
     gene            complement(join(2583..2683,1..544))
                     /locus_tag="HTB90_RS00005"
                     /old_locus_tag="ST582_p1001"
     CDS             complement(join(2583..2683,1..544))
                     /locus_tag="HTB90_RS00005"
                     /old_locus_tag="ST582_p1001"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_032495680.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="quinolone resistance pentapeptide repeat protein
                     QnrD1"
                     /protein_id="WP_012634451.1"
                     /translation="MEKHFINEKFSRDQFTGNRVKNIAFSNCDFSGVDLTDTEFVDCSF
                     YDRNSLEGCDFNRAKLKNASFKSCDLSMSNFKNISALGLEISECLAQGADFRGANFMNM
                     ITTRSWFCSAYITKTNLSYANFSRVILEKCELWENRWNGTVITGAVFRGSDLSCGEFSS
                     FDWSLADFTGCDLTGGALGELDARRINLDGVKLDGEQALQLVESLGVIVHR"
                     /name="quinolone resistance pentapeptide repeat protein
                     QnrD1"
     gene            complement(1505..1945)
                     /locus_tag="HTB90_RS00010"
     CDS             complement(1505..1945)
                     /locus_tag="HTB90_RS00010"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="WP_015063446.1"
                     /translation="MSQLFRLASPEDYEYIEELNLWELSFDKRPVQGVRCEDPVIGAEK
                     YNQGREKFKALASRHKKHWKPNGLTFSELIRWAIECGTPEQCQLVLALYHCTNDDDYQA
                     MGIQLSRSIDNANVSPIIFFTGKNQRLLGDISMLKQLEEKVR"
                     /name="hypothetical protein"
     ARG             complement(2584..2681)
                     /name="QnrD1"
                     /gene="QnrD1"
                     /gene_name="quinolone resistance protein (qnr)"
                     /tool="rgi"
                     /drug_class="fluoroquinolone antibiotic"
                     /identity="100.0"
                     /coverage="14.95"
     ARG             complement(3..544)
                     /name="QnrD1"
                     /gene="QnrD1"
                     /gene_name="quinolone resistance protein (qnr)"
                     /tool="rgi"
                     /drug_class="fluoroquinolone antibiotic"
                     /identity="100.0"
                     /coverage="84.58"
     Typing          complement(639..794)
                     /name="Col3M"
                     /typing="replicon"
                     /tool="MOB-suite"
                     /identity="98.089"
                     /coverage="100.0"
                     /evalue="2.29e-71"
ORIGIN
        1 caagcgcccc acccgttaaa tcacaaccag taaaatcagc caaagaccaa tcaaacgatg
       61 aaaactcccc acaagaaaga tcggagccac gaaacacggc gccagttatc acagtgccat
      121 tccagcgatt ttcccacagt tcgcactttt ctaatatgac tctagaaaaa ttagcgtaac
      181 taagatttgt cttggttata taagcactac aaaaccatga ccttgtagtt atcatattca
      241 taaaattagc ccctcgaaaa tcagctcctt gagctaaaca ctcactaatt tcaagaccta
      301 aggcgctaat gtttttaaaa ttactcattg ataaatcgca gcttttaaag ctagcgtttt
      361 ttagtttggc tctattaaaa tcacaccctt ccaagctatt cctgtcgtaa aaactacaat
      421 caacaaattc agtatcagtt aaatcaaccc ctgaaaaatc acaatttgaa aaggcaatat
      481 ttttaactct attccccgta aattgatctc gtgaaaactt ttcattgata aagtgctttt
      541 ccatacatgc tacacctagt tatttataca gtgcaatcat tgtacattaa tttgaacaac
      601 cttaaactct agctaaaatt gattcataca atccctttta tgttaaacgg gcgagttagt
      661 tagcaaaaac ctcccgttca tccccattaa agcccctcga aacgatttta agacacgatc
      721 accctataaa acacccaaat ctacgctgaa agtttagaac ggttttgcgg gcttctgagt
      781 gcgtttttaa catcgtgcaa actgacaagt aaaacgatgc gaaatcgctg aaagtcacaa
      841 acttgttttg tggcaagaag cgatttgacc aaccgagtaa aacgagggcg gtaggctttt
      901 tgtttttatc ctgatgagcg tccagcgaag aaagggaaaa acagggggag ccgaaacgaa
      961 atgacacgcc ccagcgatgg caagtgaacc ccagtgaacg tgtttcgttt tgggggcaaa
     1021 gccccccgtc aagcgaagcg tctgaccacc acatttttga gcgaccaaat acaggggcga
     1081 aaaaaggggg tggtcagacg aacgcagtga gtttgacggg cttgggtgaa tggttttttt
     1141 cgcaggcgtc cagccgaaga aaatagccag agggcggagc cttatgtcat tcattttcgt
     1201 ccagaaaatg agtggcattg atactgaaag tatcatgggg tgcaagttag taaaactatg
     1261 attctaccca ttatttcacc cgttattctg cccgttatac ctaaattggg tgcaataacg
     1321 ggtaaagtaa taggtagaat aacaggtgga ttaatgggta agaaataaca caacgtcatc
     1381 ttgtgtctat ctattattct gtatcttatt ctatgtatta ttctacctat tacagacgaa
     1441 atagataaaa taagagatag aataatagat aggataatac ataaaataat aggtaaacct
     1501 aacgtcagcg caccttttct tcgagctgtt ttagcatcga aatatcacct aataaccgtt
     1561 gatttttacc tgtgaaaaag atgatcggac tgacatttgc attatcaata cttcggctta
     1621 actgaattcc catcgcctga taatcatcat cgtttgtgca atggtataac gctaaaacaa
     1681 gctgacattg ttctggagtt ccgcattcta ttgcccagcg gatcaactcc gaaaaggtca
     1741 atccgttcgg tttccagtgt tttttatgcc gtgacgctaa cgccttaaat ttttcacgcc
     1801 cttgattata tttttctgcc ccgatcaccg gatcttcaca acgaacccct tgaaccggtc
     1861 gcttatcaaa tgacaattcc cataaattta attcttcgat gtattcgtaa tcttctggcg
     1921 atgccaaacg aaataattga gacatagaga caccctccga tcatgtgtga acggagacag
     1981 tataaggctt tcgagaaatt ccgcttcctc gacgtgaaac aagttcacgc cttgcggcga
     2041 gcgttgcgaa ttgaatttat gaggtttacc aagctccaga tgtaacaaag ccccgtgaca
     2101 gcatcacagg gctctggtac tctaaatctt gtgcattcgt tgctcagatt agacgtcgca
     2161 atccaatctt agcaacgtga gaggcgcttg tcacgttctc attaaatacc agccaacgac
     2221 attaacccaa atgcaccact tgattgactc ggacttagcc cggtctccga aaggataaac
     2281 aggcaaattg tggtagtaaa acgtaccgga aaacgaaatt ccggctctac ctccgaatca
     2341 cgctgcggta tcgaaagatt acagtgcgta cctgataaga gcaccaatca acggactagg
     2401 gatttcttgg attgcgaagt gtcgaaagaa gcccaaccta accaaactta gccagattaa
     2461 cgagctaaga gaccatgacc caataactga tcatggagaa aagcaaagac aagatgaaga
     2521 tgtcgcttcg ctccgttttg attagtacca cattggggca ttaggcgttt tttacctaga
     2581 ttttatcggt gaacaataac acctaaactc tcaacaagct gaagcgcctg ctctccatcc
     2641 aacttcactc catctaaatt aattcgcctt gcatcaagct cgc
//
