LOCUS       NC_019989               3692 bp    DNA     circular CON 09-JAN-2024
DEFINITION  Klebsiella pneumoniae plasmid pB1021, complete sequence.
ACCESSION   NC_019989
VERSION     NC_019989.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN14226183
KEYWORDS    RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Klebsiella/Raoultella group; Klebsiella.
REFERENCE   1  (bases 1 to 3692)
  AUTHORS   San Millan,A., Santos-Lopez,A. and Gonzalez-Zorn,B.
  TITLE     ColE1 plasmids and antibiotic resistance
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 3692)
  AUTHORS   San Millan,A., Santos-Lopez,A. and Gonzalez-Zorn,B.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-DEC-2011) Sanidad Animal, Universidad Complutense de
            Madrid, Avda. Puerta de Hierro s/n, Madrid, Madrid 28040, Spain
COMMENT     ##Genome-Annotation-Data-START##
            Annotation Provider          :: NCBI RefSeq
            Annotation Date              :: 01/09/2024 01:49:42
            Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline
            (PGAP)
            Annotation Method :: Best-placed reference protein set; GeneMarkS-2+
            Annotation Software revision :: 6.6
            Features Annotated           :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                :: 7
            CDSs (total)                 :: 7
            Genes (coding)               :: 7
            CDSs (with protein)          :: 7
            Genes (RNA)                  :: 0
            tRNAs                        :: 0
            ncRNAs                       :: 0
            Pseudo Genes (total)         :: 0
            CDSs (without protein)       :: 0
            ##Genome-Annotation-Data-END##
            REFSEQ INFORMATION: The reference sequence is identical to
            JQ319767.1.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..3692
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /strain="BB1090"
                     /db_xref="taxon:573"
                     /plasmid="pB1021"
     gene            complement(249..377)
                     /locus_tag="HS878_RS00035"
     CDS             complement(249..377)
                     /locus_tag="HS878_RS00035"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000523570.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="WP_000523570.1"
                     /translation="MGLKPGPKRIADSTGEPDKRQRDNKKTPGNTDKLKPSKSSKK"
                     /name="hypothetical protein"
     gene            540..764
                     /locus_tag="HS878_RS00005"
                     /old_locus_tag="D647_p18001"
     CDS             540..764
                     /locus_tag="HS878_RS00005"
                     /old_locus_tag="D647_p18001"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000879771.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6290 family protein"
                     /protein_id="WP_015328243.1"
                     /translation="MLAIRLSDEIESRLDSLAKQTGRTKTFYAREAILAHLEDLEDYYL
                     SAETAARVRRGDEAVHSSEDVRKSLGLDY"
                     /name="DUF6290 family protein"
     gene            748..1014
                     /locus_tag="HS878_RS00010"
                     /old_locus_tag="D647_p18002"
     CDS             748..1014
                     /locus_tag="HS878_RS00010"
                     /old_locus_tag="D647_p18002"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000262326.1"
                     /GO_function="GO:0008657 - DNA topoisomerase type II
                     (double strand cut, ATP-hydrolyzing) inhibitor activity
                     [Evidence IEA]; GO:0042803 - protein homodimerization
                     activity [Evidence IEA]"
                     /GO_process="GO:0030541 - plasmid partitioning [Evidence
                     IEA]; GO:0051290 - protein heterotetramerization [Evidence
                     IEA]"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system RelE/ParE family
                     toxin"
                     /protein_id="WP_000262326.1"
                     /translation="MVWTINYSDRALKSLRKMDKQNARRIVDFMDLRIAVAADPRQSGK
                     PLKGELGEFWRYRVGDYRILCEIRDDELVILAATIGHRREVYD"
                     /name="type II toxin-antitoxin system RelE/ParE family
                     toxin"
     gene            complement(1076..1555)
                     /locus_tag="HS878_RS00015"
     CDS             complement(1076..1555)
                     /locus_tag="HS878_RS00015"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017896843.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="WP_227525340.1"
                     /translation="MRKTLLLCVPLFLLAGCAQQKQQMPDANYEKFAKVEVASDACLKS
                     NFITAQEAGQAHSNISLFLSSWAYDYVRYSNLLAQGHEEVKKIKITQEGCNLLRAKIYQ
                     DNIEAQRYQKQMEMAAQQKALADQQALQSIQNMQNTLPKTTYCNQIGTQTICNSY"
                     /name="hypothetical protein"
     gene            complement(1647..2078)
                     /locus_tag="HS878_RS00020"
     CDS             complement(1647..2078)
                     /locus_tag="HS878_RS00020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003511628.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6530 family protein"
                     /protein_id="WP_053274236.1"
                     /translation="MNIPTHLKHKPIIAVENYDRIDGPYADDTDAMGLSVGIAQWNTPG
                     YTELSAKVWRNTGEKWSRQSEELPLHRVIDLATLICIAMDYSKHGRLSSSDDFPVSRSG
                     GNPELSRHIDLMKNELKENHEYLDESLKRLAAELKRLGY"
                     /name="DUF6530 family protein"
     gene            3223..3450
                     /locus_tag="HS878_RS00025"
     CDS             3223..3450
                     /locus_tag="HS878_RS00025"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001046776.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="WP_224019247.1"
                     /translation="MFGFSPGELMNLCPDERLLFVRMISAMLRRSGGDAGAVMFEAYRH
                     IVSDTNQARRSYMLDLLESVRHDYVHGGYT"
                     /name="hypothetical protein"
     gene            complement(3498..3686)
                     /locus_tag="HS878_RS00030"
                     /old_locus_tag="D647_p18003"
     CDS             complement(3498..3686)
                     /locus_tag="HS878_RS00030"
                     /old_locus_tag="D647_p18003"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000165998.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Rop family plasmid primer RNA-binding protein"
                     /protein_id="WP_000165998.1"
                     /translation="MTKQESAALNMAKFIRAQSLLLLEKLDVLDLDDEAADCERMHEQA
                     EALYQKLSARFGIQDGE"
                     /name="Rop family plasmid primer RNA-binding protein"
     Typing          complement(2365..2884)
                     /name="rep_cluster_2335"
                     /typing="replicon"
                     /tool="MOB-suite"
                     /identity="84.686"
                     /coverage="89.0"
                     /evalue="4.31e-144"
ORIGIN
        1 ttttcccggt tttatggtga tcgcagactg aaatcttact tcattcactt gagtgcatag
       61 ccatgcaggt acgcagaaat catcaggggc gttttttctc gatatgggca cagaaaggtg
      121 tatgtttcag gccggagtcc tcagaaacgc cctgagggcg cctgaggtgg tgcgggcaac
      181 agatgttatg ttcaatcaga ctgatctgcg ggtacaaaaa aagccccgga gggcttttaa
      241 ctactgactt atttttttga ggatttgctg ggtttcaatt tgtcagtatt ccccggcgtt
      301 tttttattgt cacgctggcg tttatcaggt tcccctgttg aatcggcaat tcgtttcgga
      361 cccggcttaa gacccataat cgttatcctt tcaatagtta agaggaaagc cctcaagctg
      421 gatatattga cagcgttacg gattatcaag aggggccagc aagattattt tttgttcttt
      481 taggttgatt gcgatactat tgctatacat gtatatcaaa tggtgttcag gaggtttata
      541 tgcttgctat ccggttatct gatgagattg agtcccgtct ggactcgctg gcgaagcaaa
      601 ccggcagaac aaagacgttc tatgcgcggg aagcaatact ggcgcatctg gaagacctgg
      661 aagattatta tctttcagca gaaactgccg cacgcgttcg ccgtggtgat gaagccgtgc
      721 attcgtctga agacgtgagg aagtcacttg gtctggacta ttaactattc cgaccgggcg
      781 ctcaaatcgt tacgcaagat ggacaaacag aacgcacgac ggattgtgga ttttatggat
      841 ttacgcattg cagttgctgc cgatcctcgc cagtcaggga agccgctcaa aggtgagctg
      901 ggcgagttct ggcgctatcg ggtgggagat tatcgcattc tgtgtgagat ccgggatgac
      961 gagctggtta tccttgccgc caccattggc catcgccgcg aagtttacga ctgaagcccg
     1021 ctatgcgggc tttttttgat gttgacaacg gatgttatgg taaatcaatt tatgatcagt
     1081 agctgttaca gattgtctgt gtgccaatct ggttacagta agttgtttta ggtaaggtgt
     1141 tttgcatatt ttgaattgat tgtaacgcct gctgatctgc taaggctttt tgttgtgcag
     1201 ccatctccat ctgtttttga tatctctgtg cctcgatgtt gtcttgatag atttttgcgc
     1261 gcaaaaggtt gcagccttcc tgtgttatct tgattttttt tacttcttca tgtccttgcg
     1321 ccaagaggtt tgagtaacga acgtagtcat acgcccatga acttaaaaat aaggatatgt
     1381 tggaatgtgc ctgacctgct tcctgtgctg taatgaagtt ggattttaag caggcatcag
     1441 aggcaacctc gacctttgcg aacttttcgt aattagcatc tggcatttgt tgtttttgtt
     1501 gggcgcaacc agcaagtaaa aacaacggaa cgcaaagtaa taacgttttt ctcatttagt
     1561 gttttatcct tttttgacaa gaaaaaccta atgccccgtg gtgggtatat aaaaaatcac
     1621 gggggagcgt agcgaccttc gtctacttaa taacctaaac gttttagttc tgctgctaaa
     1681 cgcttaagac tttcatctaa atactcgtga ttctctttta attcgttttt catcaaatca
     1741 atatgacgag ataactcagg attacctcct gaacgactga ccggaaagtc gtcgctggaa
     1801 gataagcgac catgtttgct gtaatccatc gctatgcaga taagcgttgc taagtcgatg
     1861 acacggtgaa gaggtaactc ttcagattgc cgtgaccact tttctccggt gttgcgccag
     1921 acttttgctg atagctcggt atatccgggg gtgttccatt gagcaattcc aacggaaagc
     1981 cccatagcat cagtgtcatc agcatagggg ccatcaattc gatcatagtt ttctacagcg
     2041 ataatcggtt tgtgtttcag atgagtaggg atgttcatat cattctctgc agtgtgaatt
     2101 tggcttctta atcagtaaac aagaaaacaa ataaatttac taattagtaa atgtaacatt
     2161 ttatgaattg ttggatttga atttgttgga gtggatcttc ttgagatcat ttatggctga
     2221 gcgtaatctc ttgctctgaa aacgaaaaaa ccacctgggg aggtggtttt tcgaaggtta
     2281 ggtcagttgg ggaactgctt aaccaggtaa ctgtcttgtg cgagacgagt cacctaaact
     2341 gtccttccag tgtagccgga ctcaggctcc cacttcaaga actccagata aatctctcgc
     2401 acatctcagt taccaatggc taccgccact ggcgattttt cgtgtctgtt ccgggttgga
     2461 ctcaagtgat agttaccggg acgacgtggt agtcgggctg aacggggggt tcttgcatac
     2521 agcccagctt ggagcgaact gtctaaacgg aacggggcgt ggtgatttag gtaaagcttc
     2581 caccacaaca cggacgccgc atgacgggaa caggagagcg caagagggag ccatcaggtg
     2641 gaaacgcctg gtatctttat agtcctgtcg ggtttcgcca ccactgattt gagcgtcaga
     2701 tttcgtgatg cttgtcaggg gggcggagcc tatggaaaaa cggcttcgcc gtggccttct
     2761 tgcttccctg ttaagcttct tcctggaaga tgccaggaaa tttccgcccc gccagtaagc
     2821 cggtaccgct cgccgcagcc gaacgaccga gcggagcgag tcagtgagcg aggaagcgga
     2881 atatctccgg gcttatcttt ggcaccgtac gcgccatagc tgcatttttt aatacgatgc
     2941 aggatagggc agacgccgca aaatgacgtc atccgacatc attccgccgc gttcgcccag
     3001 tgacctacag tcggctctgg ggtgtcgggg ctgtgccctg acacccgcta aaagcactga
     3061 cgcgcctgcg gcttgcccaa ccccgcgccg tccgggaaag aatttcccga tcgacccgac
     3121 gtttctgttt acctgtgatg ttaacgtttg gatctttttc ccgggtttac ctattttctt
     3181 ctaatgaagc gttcacagct gacgttaata gatgggtgct tcatgtttgg tttttcacca
     3241 ggagaactta tgaacctttg ccccgatgaa cgtctgctct ttgtgcggat gatttccgct
     3301 atgcttcgcc gttcgggcgg tgatgcgggt gctgttatgt ttgaggcgta tcgccatatt
     3361 gtgtccgata ccaatcaagc tcgtcgttcc tacatgctcg acctgctcga aagcgtcagg
     3421 catgactatg tacacggtgg atatacatag ttgccatgga tacgcttttc gtctaagtga
     3481 gcgttatttt cgtctcttta ttcgccgtcc tgtataccga agcgtgcgct cagcttctga
     3541 taaagcgctt ctgcctgttc gtgcattcgc tcacagtcgg ctgcctcgtc atcaagatcg
     3601 agcacgtcga gtttttcgag cagcagcagc gactgcgccc ggataaattt tgccatgttc
     3661 agtgcggctg attcctgttt tgtcatacgg ct
//
