LOCUS       NC_018885               2062 bp    DNA     circular CON 14-DEC-2023
DEFINITION  Bacillus thuringiensis Bt407 plasmid BTB_2p, complete sequence.
ACCESSION   NC_018885
VERSION     NC_018885.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN02603279
            Assembly: GCF_000306745.1
KEYWORDS    RefSeq.
SOURCE      Bacillus thuringiensis Bt407
  ORGANISM  Bacillus thuringiensis Bt407
            Bacteria; Bacillota; Bacilli; Bacillales; Bacillaceae; Bacillus;
            Bacillus cereus group.
REFERENCE   1  (bases 1 to 2062)
  AUTHORS   Sheppard,A.E., Poehlein,A., Rosenstiel,P., Liesegang,H. and
            Schulenburg,H.
  TITLE     Complete Genome Sequence of Bacillus thuringiensis Strain 407 Cry-
  JOURNAL   Genome Announc 1 (1) (2013)
   PUBMED   23405326
REFERENCE   2  (bases 1 to 2062)
  AUTHORS   Sheppard,A.E., Poehlein,A., Liesegang,H., Rosenstiel,P. and
            Schulenburg,H.
  TITLE     Direct Submission
  JOURNAL   Submitted (09-OCT-2012) Department of Genomic and Applied
            Microbiology, Goettingen Genomics Laboratory,
            Georg-August-University-Goettingen, Grisebachstr. 8, Goettingen,
            Lower Saxony 37079, Germany
COMMENT     ##Assembly-Data-START##
            Assembly Method                   :: Newbler v. v2.6
            Sequencing Technology             :: Sanger dideoxy sequencing; 454
            ##Assembly-Data-END##
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Date                   :: 12/14/2023 02:22:29
            Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline
            (PGAP)
            Annotation Method :: Best-placed reference protein set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,598
            CDSs (total)                      :: 6,409
            Genes (coding)                    :: 6,240
            CDSs (with protein)               :: 6,240
            Genes (RNA)                       :: 189
            rRNAs                             :: 14, 14, 14 (5S, 16S, 23S)
            complete rRNAs                    :: 14, 14, 14 (5S, 16S, 23S)
            tRNAs                             :: 142
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 169
            CDSs (without protein)            :: 169
            Pseudo Genes (ambiguous residues) :: 0 of 169
            Pseudo Genes (frameshifted)       :: 95 of 169
            Pseudo Genes (incomplete)         :: 72 of 169
            Pseudo Genes (internal stop)      :: 33 of 169
            Pseudo Genes (multiple problems)  :: 26 of 169
            ##Genome-Annotation-Data-END##
            REFSEQ INFORMATION: The reference sequence is identical to
            CP003897.1.
            Source DNA available from Hinrich Schulenburg, Evolutionary Ecology
            Genetics Zoological Institute, CAU Kiel, Am Botanischen Garten 1-9
            24118 Kiel, Germany.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2062
                     /organism="Bacillus thuringiensis Bt407"
                     /mol_type="genomic DNA"
                     /strain="407"
                     /db_xref="taxon:527021"
                     /plasmid="BTB_2p"
     gene            101..970
                     /locus_tag="BTB_RS32220"
                     /old_locus_tag="BTB_2p00010"
     CDS             101..970
                     /locus_tag="BTB_RS32220"
                     /old_locus_tag="BTB_2p00010"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001198524.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="WP_001198524.1"
                     /translation="MQVYLDRLMIKYKDVTEKQFSDVLTKISSKQIFLPNTPIRSEHGT
                     SVRDYHRVIHIGYGEGAVYIGWKHNSEKEKDSYDMKVDFNPSKFENNELQKDSYEKVFE
                     TVFHTLNAVLKSNKRVVYGMDIAFDIERHMSDIVSYSKTGKQQDRHKGTVYYGNRNKDG
                     YLKIYDKKKELYNHFKRMIEEENLTRIEYSWRDSDGVVVDEIRKSPPFSIDESYTFSIF
                     NLNNVKGALKACLICYSNGTMDMKEFPRRTKESIKKALEEMDHLAVDPILQDCWLSILE
                     NIKNYTRL"
                     /name="hypothetical protein"
     gene            1158..1400
                     /locus_tag="BTB_RS32225"
                     /old_locus_tag="BTB_2p00020"
     CDS             1158..1400
                     /locus_tag="BTB_RS32225"
                     /old_locus_tag="BTB_2p00020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001293418.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="WP_001293418.1"
                     /translation="MSEMVRVNTRISKKLNDWLDEYSKESGVPKSTLVHLALENYVNQK
                     VMLEQMPKMQQMLSMMFENVTQQQLNQKGNMFELK"
                     /name="hypothetical protein"
     gene            1835..2062
                     /locus_tag="BTB_RS32230"
                     /old_locus_tag="BTB_2p00030"
     CDS             1835..2062
                     /locus_tag="BTB_RS32230"
                     /old_locus_tag="BTB_2p00030"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002100596.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="WP_000572905.1"
                     /translation="MIESEGNNLKLTERQLNDLKRISELRVKLFGVPGESVVDPENVEF
                     LLDNAISSYLGQLEIFEVTIEIEQYNSMCG"
                     /name="hypothetical protein"
     Typing          102..970
                     /name="rep_cluster_1434"
                     /typing="replicon"
                     /tool="MOB-suite"
                     /identity="100.0"
                     /coverage="100.0"
                     /evalue="0.0"
ORIGIN
        1 attgtagaaa tgtggcgaag acattttcgg acattctaat agccgaaaat cgtgtacaaa
       61 atgacatgtt taataaaaaa taaggagcgg gatagatttt atgcaagttt atttggatag
      121 gctaatgatt aagtataaag atgtaacaga gaaacaattt agtgatgttt taactaaaat
      181 atcgtcaaag cagatttttt taccgaatac acctattagg tcagaacatg ggacgtctgt
      241 tagagattat catagagtta tacatattgg atatggtgaa ggtgcagttt atatagggtg
      301 gaaacataat tcggaaaagg aaaaagatag ctatgatatg aaagttgatt ttaacccttc
      361 taaatttgaa aataacgagt tgcaaaaaga tagttatgaa aaagtgtttg aaaccgtttt
      421 tcatacgtta aatgcagttt tgaagtctaa taagcgagtg gtttatggta tggatattgc
      481 ttttgatata gagcgtcata tgagtgatat tgtgtcttat agtaaaacag gaaagcaaca
      541 ggatagacat aaaggaactg tttattatgg aaatagaaat aaagatggat atttgaagat
      601 atatgataag aaaaaggagt tatataatca ttttaaaaga atgatagaag aagagaattt
      661 gactcgtatt gagtatagtt ggagagactc tgacggtgta gtggtagacg aaataaggaa
      721 gagtcctccg tttagtattg atgaatctta tacattctcg atttttaatt tgaataatgt
      781 taaaggggca ttaaaagctt gtttgatttg ttattctaat ggaactatgg atatgaaaga
      841 gttccctcgt agaactaaag agagtataaa aaaagccctt gaagaaatgg atcacttggc
      901 ggtggacccc attctacagg actgttggtt atctatatta gaaaatatta agaactatac
      961 tcgtttatga tattagcgtg tgcttctctg tgtgtcaaga gggtgtcaat atgatgctct
     1021 ctttttgttt ttcttaactt gtttatatta atagcggata gagtcccact tttacattgt
     1081 tctggtgtat cttagtgttg atattgtgtt taaactgatg ttatatttat gtagtacgat
     1141 atacaagagg tgattagatg agtgaaatgg ttcgtgttaa tacacgtatc agtaaaaagt
     1201 taaatgattg gttggacgag tatagcaaag aaagtggtgt accgaaaagc actttagttc
     1261 atttagcttt agagaattat gtgaatcaaa aggttatgtt ggaacaaatg ccaaagatgc
     1321 aacaaatgtt gagtatgatg tttgaaaatg taacgcagca acaattgaat caaaaaggga
     1381 atatgtttga gttgaagtaa cggttatgtt tcgaaaatgt agtcttattg attaggagat
     1441 gcacatcgat aaactaaatg cgtagttggt gtggctgaag tttgcccgcc acctactcat
     1501 ttagaatatc cgtgcatggg tccctgaaca attaggaaac ggcttttgta atcgtatgag
     1561 ttgtaattat tattcacttg ggtgaacgtt gtatgactga aaggaaaccc atggcagtta
     1621 actgtgtaaa tgggcactta tttattaagt gtattcgacg gagccggaag tagacgactt
     1681 aagggagcga catgaatgaa gtgaagtgca gacagaaggt aaggtgacgg agtggactct
     1741 caaaggacac gacggcgcgt gaactgatgg caaacgaaat ggaatgagtg agaagagcgt
     1801 acggtcggcg aggtaacgga ggtgtaggag cagattgata gaaagtgagg gtaacaattt
     1861 gaaactgaca gaaagacaat tgaatgattt gaaaagaatt agcgaattac gtgtaaagtt
     1921 gtttggagtt cctggtgaaa gtgtagttga tccagagaat gttgagtttt tattggataa
     1981 tgctattagt tcttatttag ggcaattaga aatttttgaa gtcacgatag agattgaaca
     2041 gtataattca atgtgtgggt aa
//
