LOCUS       NC_010427               2907 bp    DNA     circular CON 09-SEP-2023
DEFINITION  Staphylococcus aureus plasmid pKH15, complete sequence.
ACCESSION   NC_010427
VERSION     NC_010427.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN14225738
KEYWORDS    RefSeq.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus.
REFERENCE   1  (bases 1 to 2907)
  AUTHORS   Park,J.H., Lee,J.Y. and Moon,K.H.
  TITLE     Characterization of plasmids of chloramphenicol resistant
            Staphylococcus aureus
  JOURNAL   Yakhakhoe Chi 52 (1), 33-36 (2008)
REFERENCE   2  (bases 1 to 2907)
  AUTHORS   Moon,K.H., Park,J.H. and Lee,J.Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (24-SEP-2007) Pharmacy, Kyungsung University, 110-1,
            Daeyun-dong, Nam-gu, Busan 608-736, Korea
COMMENT     ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Date                   :: 09/09/2023 03:52:15
            Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline
            (PGAP)
            Annotation Method :: Best-placed reference protein set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2
            CDSs (total)                      :: 2
            Genes (coding)                    :: 1
            CDSs (with protein)               :: 1
            Genes (RNA)                       :: 0
            tRNAs                             :: 0
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 1 of 1
            Pseudo Genes (incomplete)         :: 0 of 1
            Pseudo Genes (internal stop)      :: 0 of 1
            ##Genome-Annotation-Data-END##
            REFSEQ INFORMATION: The reference sequence is identical to
            EU170348.1.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2907
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /strain="KH28"
                     /db_xref="taxon:1280"
                     /plasmid="pKH15"
     gene            complement(341..1264)
                     /locus_tag="HS548_RS00005"
                     /old_locus_tag="pKH15_01"
     CDS             complement(341..1264)
                     /locus_tag="HS548_RS00005"
                     /old_locus_tag="pKH15_01"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002499696.1"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_process="GO:0006260 - DNA replication [Evidence IEA]"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein rep"
                     /protein_id="WP_000417606.1"
                     /translation="MEKYTEKKQRNQVFQKFIKRHIGENQMDLVEDCNTFLSFVADKTL
                     EKQKLYKANSCKNRFCPVCAWRKARKDALGLSLMMQYIKQQEKKEFIFLTLTTPNVMSD
                     ELENEIKRYNNSFRKLIKRKKVGSVIKGYVRKLEITYNKKRDDYNPHFHVLIAVNKSYF
                     TDKRYYISQQEWLDLWRDVTGISEITQVQVQKIRQNNNKELYEMAKYSGKDSDYLINQK
                     VFDAFYKSLKGKQVLVYSGLFKEAKKKLKNGDLDYLKEIDPTEYIYQIFYIWKQKEYLA
                     SELYDLTEQEKREINHKMIDEIEEEQ"
                     /name="protein rep"
     gene            1733..2452
                     /gene="catA"
                     /locus_tag="HS548_RS00010"
                     /old_locus_tag="pKH15_02"
                     /pseudo=""
     ARG             1734..2380
                     /name="catA"
                     /gene="catA"
                     /gene_name="type A-9 chloramphenicol O-acetyltransferase"
                     /tool="amrfinderplus"
                     /drug_class="PHENICOL"
                     /identity="100.0"
                     /coverage="100.0"
     ARG             1734..2383
                     /name="Streptococcus suis chloramphenicol
                     acetyltransferase"
                     /gene="Streptococcus suis chloramphenicol
                     acetyltransferase"
                     /gene_name="chloramphenicol acetyltransferase (CAT)"
                     /tool="rgi"
                     /drug_class="phenicol antibiotic"
                     /identity="94.91"
                     /coverage="100.0"
     Typing          complement(342..1276)
                     /name="rep_cluster_1230"
                     /typing="replicon"
                     /tool="MOB-suite"
                     /identity="100.0"
                     /coverage="100.0"
                     /evalue="0.0"
ORIGIN
        1 aagcttttaa aaagcaaata tgagccaaat aaatatattc taattctaca aacaaaaatt
       61 tgagcaaatt cagtgtcgat tttttaagac actgcccagt tacatgcaaa ttaaaatttt
      121 catgattttt tatagttcct aacagggtta aaatttgtat aacgaaagta taatgtttat
      181 ataacgttag tataataaag cattttaaca ttatactttt gataatcgtt tatcgtcgtc
      241 atcacaataa cttttaaaat actcgtgcat aattcaacag ctgacctccc aataactaca
      301 tggtgttatc gggaggtcag ctgttagcac ttatattttg ttattgttct tcctcgattt
      361 cgtctatcat tttgtgatta atttctcttt tttcttgttc tgttaagtca taaagttcac
      421 tagctaaata ctctttttgt ttccaaatat aaaaaatttg atagatatat tcggttggat
      481 caatttcttt taagtaatct aaatccccat tttttaattt ctttttagcc tctttaaata
      541 atcctgaata aactaatacc tgtttacctt taagtgattt ataaaatgca tcaaagactt
      601 tttgatttat taaataatca ctatctttac cagaatactt agccatttca tataattctt
      661 tattattatt ttgtcttatt ttttgaactt gaacttgtgt tatttctgaa atgcccgtta
      721 catcacgcca taaatctaac cattcttgtt ggctaatata atatctttta tctgtgaaat
      781 acgatttatt tactgcaatt aacacatgaa aatgaggatt ataatcatct ctttttttat
      841 tatatgtaat ctctaactta cgaacatatc cctttataac actacctact ttttttctct
      901 ttataagttt tctaaaagaa ttattataac gttttatttc attttctaat tcatcactca
      961 ttacattagg tgtagtcaaa gttaaaaaga taaactcctt tttctcttgc tgcttaatat
     1021 attgcatcat caaagataaa cccaatgcat cttttctagc ttttctccaa gcacagacag
     1081 gacaaaatcg atttttacaa gaattagctt tatataattt ctgtttttct aaagttttat
     1141 cagctacaaa agacagaaat gtattgcaat cttcaactaa atccatttga ttctctccaa
     1201 tatgacgttt aataaatttc tgaaatactt gatttctttg ttttttctca gtatactttt
     1261 ccatgttata acacataaaa acaacttagt tttcacaaac tatgacaata aaaaaagttg
     1321 cttttcccct ttctatgtat gttttttact agtcatttaa aacgatacat taataggtac
     1381 gaaaaagcaa ctttttttgc gcttaaaacc agtcatacca ataacttaag ggtaactagc
     1441 ctcgccggca atagttaccc ttattatcaa gataagaaag aaaaggattt ttcgctacgc
     1501 tcaaatcctt taaaaaaaca caaaagacca cattttttaa tgtggtcttt tattcttcaa
     1561 ctaaagcacc cattagttca acaaacgaaa attggataaa gtgggatatt tttaaaatat
     1621 atatttatgt tacagtaata ttgactttta aaaaaggatt gattctaatg aagaaagcag
     1681 acaagtaagc ctcctaaatt cactttagat aaaaatttag gaggcatatc aaatgaactt
     1741 taataaaatt gatttagaca attggaagag aaaagagata tttaatcatt atttgaacca
     1801 acaaacgact tttagtataa ccacagaaat tgatattagt gttttatacc gaaacataaa
     1861 acaagaagga tataaatttt accctgcatt tattttctta gtgacaaggg tgataaactc
     1921 aaatacagct tttagaactg gttacaatag cgacggagag ttaggttatt gggataagtt
     1981 agagccactt tatacaattt ttgatggtgt atctaaaaca ttctctggta tttggactcc
     2041 tgtaaagaat gacttcaaag agttttatga tttatacctt tctgatgtag agaaatataa
     2101 tggttcgggg aaattgtttc ccaaaacacc tatacctgaa aatgcttttt ctctttctat
     2161 tattccatgg acttcattta ctgggtttaa cttaaatatc aataataata gtaattacct
     2221 tctacccatt attacagcag gaaaattcat taataaaggt aattcaatat atttaccgct
     2281 atctttacag gtacatcatt ctgtttgtga tggttatcat gcaggattgt ttatgaactc
     2341 tattcaggaa ttgtcagata ggcctaatga ctggctttta taatatgaga taatgccgac
     2401 tgtacttttt acagtcggtt ttctaatgtc actaacctgc cccgttagtt gaagaaggtt
     2461 tttatattac agctccagat ccatatcctt ctttttctga accgacttct cctttttcgc
     2521 ttctttattc caattgcttt attgacgttg agcctcggaa cccttaacaa tcccaaaact
     2581 tgtcgaatgg tcggcttaat agctcacgct atgccgacat tcgtctgcaa gtttagttaa
     2641 gggttcttct caacgcacaa taaattttct cggcataaat gcgtggtcta atttttattt
     2701 ttaataacct tgatagcaaa aaatgccatt ccaatacaaa accacatacc tataatcgat
     2761 aaccacataa cagtcataaa accactcctt tttaacaaac tttatcacaa gaaatattta
     2821 aattttaaat gcctttattt tgaattttaa ggggcatttt aaagatttag gggtaaatca
     2881 tatagtttta tgcctaaaaa cctacag
//
