LOCUS       NC_010426               2909 bp    DNA     circular CON 09-SEP-2023
DEFINITION  Staphylococcus aureus plasmid pKH13, complete sequence.
ACCESSION   NC_010426
VERSION     NC_010426.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN14225739
KEYWORDS    RefSeq.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus.
REFERENCE   1  (bases 1 to 2909)
  AUTHORS   Park,J.H., Lee,J.Y. and Moon,K.H.
  TITLE     Characterization of plasmids of chloramphenicol resistant
            Staphylococcus aureus
  JOURNAL   Yakhakhoe Chi 52 (1), 33-36 (2008)
REFERENCE   2  (bases 1 to 2909)
  AUTHORS   Moon,K.H., Park,J.H. and Lee,J.Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (24-SEP-2007) Pharmacy, Kyungsung University, 110-1,
            Daeyun-dong, Nam-gu, Busan 608-736, Korea
COMMENT     ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Date                   :: 09/09/2023 03:51:28
            Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline
            (PGAP)
            Annotation Method :: Best-placed reference protein set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2
            CDSs (total)                      :: 2
            Genes (coding)                    :: 1
            CDSs (with protein)               :: 1
            Genes (RNA)                       :: 0
            tRNAs                             :: 0
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 1
            CDSs (without protein)            :: 1
            Pseudo Genes (ambiguous residues) :: 0 of 1
            Pseudo Genes (frameshifted)       :: 1 of 1
            Pseudo Genes (incomplete)         :: 0 of 1
            Pseudo Genes (internal stop)      :: 0 of 1
            ##Genome-Annotation-Data-END##
            REFSEQ INFORMATION: The reference sequence is identical to
            EU170347.1.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2909
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /strain="KH13"
                     /db_xref="taxon:1280"
                     /plasmid="pKH13"
     gene            complement(341..1264)
                     /locus_tag="HS500_RS00005"
                     /old_locus_tag="pKH13_01"
     CDS             complement(341..1264)
                     /locus_tag="HS500_RS00005"
                     /old_locus_tag="pKH13_01"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002499696.1"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_process="GO:0006260 - DNA replication [Evidence IEA]"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein rep"
                     /protein_id="WP_000417606.1"
                     /translation="MEKYTEKKQRNQVFQKFIKRHIGENQMDLVEDCNTFLSFVADKTL
                     EKQKLYKANSCKNRFCPVCAWRKARKDALGLSLMMQYIKQQEKKEFIFLTLTTPNVMSD
                     ELENEIKRYNNSFRKLIKRKKVGSVIKGYVRKLEITYNKKRDDYNPHFHVLIAVNKSYF
                     TDKRYYISQQEWLDLWRDVTGISEITQVQVQKIRQNNNKELYEMAKYSGKDSDYLINQK
                     VFDAFYKSLKGKQVLVYSGLFKEAKKKLKNGDLDYLKEIDPTEYIYQIFYIWKQKEYLA
                     SELYDLTEQEKREINHKMIDEIEEEQ"
                     /name="protein rep"
     gene            1735..2454
                     /gene="catA"
                     /locus_tag="HS500_RS00010"
                     /old_locus_tag="pKH13_02"
                     /pseudo=""
     ARG             1736..2382
                     /name="catA"
                     /gene="catA"
                     /gene_name="type A-9 chloramphenicol O-acetyltransferase"
                     /tool="amrfinderplus"
                     /drug_class="PHENICOL"
                     /identity="100.0"
                     /coverage="100.0"
     ARG             1736..2385
                     /name="Streptococcus suis chloramphenicol
                     acetyltransferase"
                     /gene="Streptococcus suis chloramphenicol
                     acetyltransferase"
                     /gene_name="chloramphenicol acetyltransferase (CAT)"
                     /tool="rgi"
                     /drug_class="phenicol antibiotic"
                     /identity="94.91"
                     /coverage="100.0"
     Typing          complement(342..1276)
                     /name="rep_cluster_1230"
                     /typing="replicon"
                     /tool="MOB-suite"
                     /identity="100.0"
                     /coverage="100.0"
                     /evalue="0.0"
ORIGIN
        1 aagcttttaa aaagcaaata tgagccaaat aaatatattc taattctaca aacaaaaatt
       61 tgagcaaatt cagtgtcgat tttttaagac actgcccagt tacatgcaaa ttaaaatttt
      121 catgattttt tatagttcct aacagggtta aaatttgtat aacgaaagta taatgtttat
      181 ataacgttag tataataaag cattttaaca ttatactttt gataatcgtt tatcgtcgtc
      241 atcacaataa cttttaaaat actcgtgcat aattcaacag ctgacctccc aataactaca
      301 tggtgttatc gggaggtcag ctgttagcac ttatattttg ttattgttct tcctcgattt
      361 cgtctatcat tttgtgatta atttctcttt tttcttgttc tgttaagtca taaagttcac
      421 tagctaaata ctctttttgt ttccaaatat aaaaaatttg atagatatat tcggttggat
      481 caatttcttt taagtaatct aaatccccat tttttaattt ctttttagcc tctttaaata
      541 atcctgaata aactaatacc tgtttacctt taagtgattt ataaaatgca tcaaagactt
      601 tttgatttat taaataatca ctatctttac cagaatactt agccatttca tataattctt
      661 tattattatt ttgtcttatt ttttgaactt gaacttgtgt tatttctgaa atgcccgtta
      721 catcacgcca taaatctaac cattcttgtt ggctaatata atatctttta tctgtgaaat
      781 acgatttatt tactgcaatt aacacatgaa aatgaggatt ataatcatct ctttttttat
      841 tatatgtaat ctctaactta cgaacatatc cctttataac actacctact ttttttctct
      901 ttataagttt tctaaaagaa ttattataac gttttatttc attttctaat tcatcactca
      961 ttacattagg tgtagtcaaa gttaaaaaga taaactcctt tttctcttgc tgcttaatat
     1021 attgcatcat caaagataaa cccaatgcat cttttctagc ttttctccaa gcacagacag
     1081 gacaaaatcg atttttacaa gaattagctt tatataattt ctgtttttct aaagttttat
     1141 cagctacaaa agacagaaat gtattgcaat cttcaactaa atccatttga ttctctccaa
     1201 tatgacgttt aataaatttc tgaaatactt gatttctttg ttttttctca gtatactttt
     1261 ccatgttata acacataaaa acaacttagt tttcacaaac tatgacaata aaaaaagttg
     1321 ctttttcccc tttctatgta tgttttttac tagtcattta aaacgataca ttaataggta
     1381 cgaaaaagca actttttttg cgcttaaaac cagtcatacc aataacttaa gggtaactag
     1441 cctcgccggc aatagttacc cttattatca agataagaaa gaaaaggatt tttcgctacg
     1501 ctcaaatcct ttaaaaaaac acaaaagacc acatttttta atgtggtctt ttattcttca
     1561 actaaagcac ccattagttc aacaaacgaa aattggataa agtgggatat ttttaaaagt
     1621 caatatttat gttacagtaa tattgacttt taaaaaagga ttgattctaa tgaagaaagc
     1681 agacaagtaa gcctcctaaa ttcactttag ataaaaattt aggaggcata tcaaatgaac
     1741 tttaataaaa ttgatttaga caattggaag agaaaagaga tatttaatca ttatttgaac
     1801 caacaaacga cttttagtat aaccacagaa attgatatta gtgttttata ccgaaacata
     1861 aaacaagaag gatataaatt ttaccctgca tttattttct tagtgacaag ggtgataaac
     1921 tcaaatacag cttttagaac tggttacaat agcgacggag agttaggtta ttgggataag
     1981 ttagagccac tttatacaat ttttgatggt gtatctaaaa cattctctgg tatttggact
     2041 cctgtaaaga atgacttcaa agagttttat gatttatacc tttctgatgt agagaaatat
     2101 aatggttcgg ggaaattgtt tcccaaaaca cctatacctg aaaatgcttt ttctctttct
     2161 attattccat ggacttcatt tactgggttt aacttaaata tcaataataa tagtaattac
     2221 cttctaccca ttattacagc aggaaaattc attaataaag gtaattcaat atatttaccg
     2281 ctatctttac aggtacatca ttctgtttgt gatggttatc atgcaggatt gtttatgaac
     2341 tctattcagg aattgtcaga taggcctaat gactggcttt tataatatga gataatgccg
     2401 actgtacttt ttacagtcgg ttttctaatg tcactaacct gccccgttag ttgaagaagg
     2461 tttttatatt acagctccag atccatatcc ttctttttct gaaccgactt ctcctttttc
     2521 gcttctttat tccaattgct ttattgacgt tgagcctcgg aacccttaac aatcccaaaa
     2581 cttgtcgaat ggtcggctta atagctcacg ctatgccgac attcgtctgc aagtttagtt
     2641 aagggttctt ctcaacgcac aataaatttt ctcggcataa atgcgtggtc taatttttat
     2701 ttttaataac cttgatagca aaaaatgcca ttccaataca aaaccacata cctataatcg
     2761 ataaccacat aacagtcata aaaccactcc tttttaacaa actttatcac aagaaatatt
     2821 taaattttaa atgcctttat tttgaatttt aaggggcatt ttaaagattt aggggtaaat
     2881 catatagttt tatgcctaaa aacctacag
//
