LOCUS       NC_009781               5146 bp    DNA     circular CON 02-JUL-2023
DEFINITION  Escherichia coli plasmid pIGJC156, complete sequence.
ACCESSION   NC_009781
VERSION     NC_009781.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN14225745
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5146)
  AUTHORS   Wolinowska,R., Chodnicka,J., Strzezek,K. and Plucienniczak,A.
  TITLE     pIGJC156, a new plasmid isolated from clinical strain of Escherichia
            coli
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5146)
  AUTHORS   Wolinowska,R., Chodnicka,J., Strzezek,K. and Plucienniczak,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2007) Bioengineering, Institute of Biotechnology
            and Antibiotics, Staroscinska 5, Warsaw 02-516, Poland
COMMENT     ##Genome-Annotation-Data-START##
            Annotation Provider          :: NCBI RefSeq
            Annotation Date              :: 07/02/2023 04:13:50
            Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline
            (PGAP)
            Annotation Method :: Best-placed reference protein set; GeneMarkS-2+
            Annotation Software revision :: 6.5
            Features Annotated           :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                :: 5
            CDSs (total)                 :: 5
            Genes (coding)               :: 5
            CDSs (with protein)          :: 5
            Genes (RNA)                  :: 0
            tRNAs                        :: 0
            ncRNAs                       :: 0
            Pseudo Genes (total)         :: 0
            CDSs (without protein)       :: 0
            ##Genome-Annotation-Data-END##
            REFSEQ INFORMATION: The reference sequence is identical to
            EU090225.1.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..5146
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /db_xref="taxon:562"
                     /plasmid="pIGJC156"
     gene            1042..1950
                     /locus_tag="HS461_RS00005"
                     /old_locus_tag="pIGJC156_01"
     CDS             1042..1950
                     /locus_tag="HS461_RS00005"
                     /old_locus_tag="pIGJC156_01"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009440807.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="replication initiation protein"
                     /protein_id="WP_011999031.1"
                     /translation="MSAALQYFEENLPHRPYHTDDLAFGLRISGKGRALLARYIQQNQP
                     HAQFWLVFDVDREGAAIDWSDRNAPAPNITVKNPVNGHAHLLYALNIAVRTAPDASVKA
                     LKYAAAVERSLCEKLCADVNYSGLICKNPFHLEWLVMEWREEAYTLDELADYLDLSASA
                     RRSIDKHYGMGRNCHLFEMTRKWAYRAIRQGWPEFSQWLDAVIQRVEMYNASLPVPLSP
                     AECRAIGRSIAKYTHRKFSPEGFSAVQAARGRKGGIAKGEAYEDKRFMALCMLENGYSQ
                     KAIAAMLNVHRNTIRNWAMHK"
                     /name="replication initiation protein"
     gene            complement(2143..2541)
                     /locus_tag="HS461_RS00010"
     CDS             complement(2143..2541)
                     /locus_tag="HS461_RS00010"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="WP_021526200.1"
                     /translation="MRISNIEWLKKRIEFIRKLGKQTARQRQIIDLLDNEDRLTEQERK
                     LLHVLATAEKNDLQAQESERKQAIQKRIEGKKQRRERNHRLFLAAGLLIEAGLVDTKTG
                     ELRYKKDMLLQRLKPIKYDLDTCPNPDA"
                     /name="hypothetical protein"
     gene            2718..3644
                     /locus_tag="HS461_RS00015"
                     /old_locus_tag="pIGJC156_02"
     CDS             2718..3644
                     /locus_tag="HS461_RS00015"
                     /old_locus_tag="pIGJC156_02"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005221102.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MobA/MobL family protein"
                     /protein_id="WP_002430978.1"
                     /translation="MATYHLSVKFGGKGQAANHADYIERKEKYRDRQDLEYSAHGNMPE
                     WARDNPSHFWQAADQFERANGSTYRELEIALPRELTPEQRLELVQDFVRQEAGERHAWS
                     FAIHNPKASIDGGEQPHAHIMMSQRVNDGIERTPEQYFRRYNARYPDRGGAKKDSGNLT
                     PTQQKEQLRELRKRWEVKHNEHMRKHGFERGFIDCRTLKEQGIERRPEVHLGFEAAGRL
                     DDAQRHDIMQKRSEPDYYRHLEQARMVGHDIREWLDTPVKQHELVRRLQHDIAREHGFD
                     MRDGVSRQNRTEPERVKSPSRGFSMGF"
                     /name="MobA/MobL family protein"
     gene            3647..4180
                     /locus_tag="HS461_RS00020"
                     /old_locus_tag="pIGJC156_03"
     CDS             3647..4180
                     /locus_tag="HS461_RS00020"
                     /old_locus_tag="pIGJC156_03"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005221103.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="WP_001590995.1"
                     /translation="MASTEEKLLTLLLSVEHLQHTAMEQQKAVADSLAVARETLRGYRD
                     ISDGVAKQVRDEVRNEVQKLDVAGLIGERISLDFQRLEESVANMKANADALNRDIATIH
                     SNIVQEYNTLKGYSWKWLGGVSVAFLVMFCVLGWGMKTMLDRNYNATAAVYQKVVTLED
                     KLAEKPVTGKSRKN"
                     /name="hypothetical protein"
     gene            complement(4246..4455)
                     /locus_tag="HS461_RS00025"
     CDS             complement(4246..4455)
                     /locus_tag="HS461_RS00025"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001618649.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="WP_001618649.1"
                     /translation="MAKLGENTPHIIDATVDFMASSQAFREYLRKLPPDHTIPPDLTDE
                     HVPLYIRRLEYYRLLYRPKQTESY"
                     /name="hypothetical protein"
     Typing          1043..1770
                     /name="Col156"
                     /typing="replicon"
                     /tool="MOB-suite"
                     /identity="95.61"
                     /coverage="88.0"
                     /evalue="0.0"
     Typing          2719..3641
                     /name="MOBQ"
                     /typing="relaxase"
                     /tool="MOB-suite"
                     /identity="98.052"
                     /coverage="100.0"
                     /evalue="0.0"
ORIGIN
        1 gagtggaggt tgttacagtc gcttttataa aacagcaacc agtttttttc aatagtctga
       61 tgatggttgt gacagttttg tgatattgtt caaaatgttt cttgttgaat gtttgttttt
      121 tggtctattg gtgtctggtt ttattttttc tgctattaca tatcaagaaa tgtgattggt
      181 gtagcaagag tggaatgcga tgtggataaa ctaattggtt gtcgaatcta atttacttag
      241 aaaactacac ttgtttttgt gtatgaattt agtgaatttg tctgtctatg tgttttcgtg
      301 catttataaa tccttcgtca ggatcttaaa tttagtgttg aatatgtagg gcctgtacgg
      361 taattattat ttagcgtagc tacttcatcg ttgttcgaac acaaccaaca acctgtaatt
      421 gttgtttctc ttggttcccc acttttgtgg ggttttttat ctcttccgtg catcgtaaag
      481 cgcggactcc ttctggaaag gttgttttag ggcatcactg aggcattttt tgcgtttgtg
      541 aatattgagc atccgataac taaaatattt cccatagact ctgattcttg ccaccgaccc
      601 caggtcggtt ttttttgtcc tggcgagatg tgaagtttgg aaacaggaaa ccccgtcaga
      661 gcgccacgca ccaggggaga aaacttgtcg ttttgagccg ttcggtgttc agaacgcacg
      721 aaaccgatcg cacatcgctt tcgtgcatag ttatgcaacg ccctgaaaac gattctgacg
      781 catttttctg gttcagcctg gtgtttcctt gtctttttgc gttttttgcg tcagaaagcg
      841 actgagggcg ttttatgggg tgcgtacaac gggagttatg gtaaatggat cggatttgcg
      901 ggaaggctcg acaggttttg tcgttggggg tagtgtaagc gactgaaaaa caaacgcccc
      961 tgaaattcgt gtctatccgc caagactttc acgaaaatac aggggcgatg tcggtcgata
     1021 acctggaagg aatcgtaaca catgagcgcc gcgcttcaat acttcgaaga aaatttaccc
     1081 caccgtccct atcacacgga tgatctcgct ttcggccttc gtatctccgg caaagggcgc
     1141 gcgcttcttg cacggtatat ccagcagaac cagcctcatg cacagttctg gctggttttt
     1201 gacgttgacc gcgagggggc tgcgattgac tggagcgacc ggaacgctcc cgcgccgaac
     1261 atcaccgtta aaaatcctgt gaacggacac gctcacctgc tctacgcact caacatcgcc
     1321 gtgagaaccg cgcctgatgc ctcggttaag gcgctgaaat atgccgcagc ggttgaacgt
     1381 tcgctgtgtg agaaactttg tgcggatgtg aactacagcg gcctgatttg caaaaatccg
     1441 ttccacctgg aatggctggt gatggagtgg cgcgaggaag cctataccct cgatgaactg
     1501 gctgattatc tcgatttgag cgcctcagcg cgccgtagca tcgataaaca ttacgggatg
     1561 gggcgaaact gccacctgtt cgaaatgacg cgcaaatggg cttacagggc gattcgtcag
     1621 ggctggcctg aattctcaca gtggcttgat gccgtgattc agcgtgtcga aatgtacaac
     1681 gcatcgcttc ctgttccgct ttcaccagct gaatgccggg ctattggcag gagcattgcg
     1741 aaatacacgc atagaaaatt ctcgccagaa gggttttccg ctgtacaggc cgcacgcggt
     1801 cgcaaggggg ggatcgctaa aggcgaagcc tacgaggaca agcgtttcat ggcgttatgt
     1861 atgctggaga atggatattc tcagaaagct attgcggcga tgctgaatgt acatcgtaat
     1921 acgatccgta attgggcaat gcacaaatag ccttatcaga taacagcgcc tttccggcgg
     1981 ttttttgagc agctattttt tgggtggttt ctgcttgtca gcccagcaat ggtgcggctt
     2041 ttcgcttgat tgaggtggta gtgctcgccg cagtctcatg accgagcgta gcgagcgaat
     2101 gagcgaggaa gcaccagggc accggaacgt gaacgggaac acttacgcgt ctgggtttgg
     2161 gcatgtgtct agatcgtact taatgggttt aagtctttgt aataacatgt cttttttata
     2221 gcgtagctcg cctgtttttg tgtccaccag tcctgcttcg atcagtagtc ctgccgcgag
     2281 aaagagccgg tgattgcgtt cccgtcgttg tttcttcccc tcgattcgtt tctggatcgc
     2341 ctgttttcgt tcgctctcct gtgcctgtaa gtcgtttttt tcggctgttg ctagtacgtg
     2401 gagaagtttg cgttcctgtt ctgtgagtct gtcctcgttg tcgagcaggt caatgatctg
     2461 tctctgtcgt gcggtctgtt ttccgagctt cctgatgaac tcgatccgtt tcttcagcca
     2521 ttcgatgttg ctgatgcgca tgttggtggt gctccctggt gtttttttgc ggtgtgttgt
     2581 ggtcgtgcag tatatcgctt gcggtcggtg ggtgcagggg ttaccttccg tactaattcg
     2641 aaaaattaga aggaagcgca cttatatgtt tctctccttc gttgagaaac agtgcgctcc
     2701 tgcggagggc tgaaaccgtg gcgacctatc acctcagcgt taaatttggt ggcaagggac
     2761 aggctgccaa ccatgccgat tacatcgagc gcaaagagaa ataccgcgac cgtcaagatt
     2821 tggaatattc cgcacacgga aacatgccgg aatgggccag ggataatcct tcccatttct
     2881 ggcaggcggc tgaccagttt gaacgtgcga acggttcgac ctatagggaa cttgaaattg
     2941 cattaccccg tgaactgaca ccggaacagc gccttgaact ggtgcaggat tttgtacgtc
     3001 aggaagctgg cgaacggcac gcctggagtt ttgccattca caatccgaaa gcgagcattg
     3061 acggcggcga acagcctcat gcacatatca tgatgagtca gcgtgtgaat gatggcattg
     3121 aacgtacacc ggaacagtat ttccggcgct ataacgccag gtatcccgac cggggaggtg
     3181 cgaaaaagga ttccggaaac ctgaccccca ctcagcaaaa agagcagttg cgggaattgc
     3241 gaaaacgctg ggaggtgaag cacaacgaac atatgagaaa gcatggcttt gaaaggggct
     3301 tcattgactg ccggacgctg aaagaacagg gcattgaacg acgtcccgaa gtgcatctgg
     3361 gttttgaagc tgccggacga cttgatgatg cccagcgtca tgacatcatg caaaaacggt
     3421 ctgaaccgga ctattaccgc catcttgaac aggcgcgaat ggtcgggcat gacatcaggg
     3481 aatggctgga tacaccggtt aagcaacatg aactggtcag aaggctgcaa catgatattg
     3541 cgcgggaaca tggctttgac atgagagacg gagtgagcag acagaaccga actgaacctg
     3601 aacgggttaa atcaccgtca cgtggatttt ctatgggatt ctgaacatgg ccagcacaga
     3661 agaaaaatta ctcacgctcc tgttatcggt ggagcatctg caacataccg caatggagca
     3721 acagaaagct gttgctgatt ctctggctgt ggcaagggaa acgcttcgcg gatatcggga
     3781 tatttctgac ggtgtggcaa aacaggtcag ggatgaagtc agaaatgagg tgcagaagct
     3841 ggacgtagca gggctgatag gtgagcgcat cagcctggat tttcagcggc tggaagagtc
     3901 agtcgcaaac atgaaggcaa acgcggatgc cctgaacagg gatattgcga caattcacag
     3961 caatatcgtg caggaataca acacccttaa agggtatagc tggaaatggc tgggtggtgt
     4021 gtcagtggct tttctggtta tgttctgtgt gctcggatgg ggaatgaaaa caatgctcga
     4081 caggaactac aacgccacag cggcggtgta tcagaaagtt gtgacactgg aagataaact
     4141 ggcggagaaa cctgtcacgg gtaagagccg gaaaaactga cgcgcttcgc ttgtccaacg
     4201 cctcacggag cgcgaaagga tttcgcgaac cgttcaccgt ttttttcaat atgattctgt
     4261 ctgctttggt cgataaagca gtcgatagta ttccagcctt cgtatatata acggtacgtg
     4321 ctcatcagta agatctggcg gtattgtgtg atcaggggga agttttctca gatactcacg
     4381 aaatgcctgg cttgatgcca taaaatctac agtagcatcg ataatatgtg gggtgttttc
     4441 acctaatttt gccatgatga taatccttat attatcacgg ttcgtgaatg atagggggtc
     4501 actattattt atgcgttagt aaaccagaaa aaatcccccg ttggcatagg gggatatgta
     4561 aggagaaata acttcgcagg tgttcttgtt tgtataacgt gaaaagactg cacgcaactt
     4621 aataagtctg ccgtacttac tttcagtttt caacataagg tttataacaa tgtatggaat
     4681 ggaagtgagc tttaaggttt cagctctaaa aaataaaata tttattagtt ggttggttgt
     4741 tgttcttgtt ctgtatgtat ataaacacta tcgacatatt atgaccggga acattcctta
     4801 ccccctctgc gctctcagag ggtttttttt tgtcattaat taataatgaa ctgaaatgca
     4861 gttccgatac ctccatttgc acattatccc tgacatatgg taccggaacc gcattaattt
     4921 tatgttataa gagtttattt ttaatgtcca gatggtttaa tggtatttat atgtaattag
     4981 ctgtatggat agtactgttt ttattgtata acttgttgtt ttttattgtt tttgtgtggt
     5041 gtgctaatct ttaagttata aaaaaacccc ttggaacaca ggggcaaaag taaggaaaac
     5101 aaatggatgc tcagtttgtg tgacacttta aactaatgga actata
//
