LOCUS       NC_005002               1983 bp    DNA     circular CON 30-JAN-2024
DEFINITION  Salmonella enterica subsp. enterica serovar Enteritidis plasmid pB,
            complete sequence.
ACCESSION   NC_005002
VERSION     NC_005002.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN14224812
KEYWORDS    RefSeq.
SOURCE      Salmonella enterica subsp. enterica serovar Enteritidis (Salmonella
            enteritidis)
  ORGANISM  Salmonella enterica subsp. enterica serovar Enteritidis
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 1983)
  AUTHORS   Gregorova,D., Matiasovicova,J., Sebkova,A., Faldynova,M. and
            Rychlik,I.
  TITLE     Salmonella enterica subsp. enterica serovar Enteritidis harbours
            ColE1, ColE2, and rolling-circle-like replicating plasmids
  JOURNAL   Can J Microbiol 50 (2), 107-112 (2004)
   PUBMED   15052312
REFERENCE   2  (bases 1 to 1983)
  AUTHORS   Rychlik,I., Gregorova,D., Matiasovicova,J., Sebkova,A. and
            Faldynova,M.
  TITLE     Salmonella enterica serovar Enteritidis plasmid pB
  JOURNAL   Unpublished
REFERENCE   3  (bases 1 to 1983)
  AUTHORS   Rychlik,I., Gregorova,D., Matiasovicova,J., Sebkova,A. and
            Faldynova,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-NOV-2002) Department of Bacteriology, Veterinary
            Research Institute, Hudcova 70, Brno 621 32, Czech Republic
COMMENT     ##Genome-Annotation-Data-START##
            Annotation Provider          :: NCBI RefSeq
            Annotation Date              :: 01/30/2024 05:05:14
            Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline
            (PGAP)
            Annotation Method :: Best-placed reference protein set; GeneMarkS-2+
            Annotation Software revision :: 6.6
            Features Annotated           :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                :: 2
            CDSs (total)                 :: 2
            Genes (coding)               :: 2
            CDSs (with protein)          :: 2
            Genes (RNA)                  :: 0
            tRNAs                        :: 0
            ncRNAs                       :: 0
            Pseudo Genes (total)         :: 0
            CDSs (without protein)       :: 0
            ##Genome-Annotation-Data-END##
            REFSEQ INFORMATION: The reference sequence is identical to
            AY178821.1.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1983
                     /organism="Salmonella enterica subsp. enterica serovar
                     Enteritidis"
                     /mol_type="genomic DNA"
                     /serovar="Enteritidis"
                     /sub_species="enterica"
                     /db_xref="taxon:149539"
                     /plasmid="pB"
     gene            84..1073
                     /locus_tag="HS172_RS00005"
                     /old_locus_tag="pB_01"
     CDS             84..1073
                     /locus_tag="HS172_RS00005"
                     /old_locus_tag="pB_01"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001362017.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein rep"
                     /protein_id="WP_011117490.1"
                     /translation="MKNPKLQYLTDYSPSDAPWDAHRSVSDDVGGIYLLAAEYERYGAR
                     MASCGGLLRFGWSTLKETGETRLRLREAHFCRVRHCPVCQWRRSLMWQARFYQSLPRIV
                     ADYPDARWMFLTLTVRNCAIGELGEMLNRMNAAFQRMKVRKEFLPVQGWIRTTEVTRGS
                     DGSAHPHFHTLMMVPPSMLSGDGYVKHARWVELWRECLRVSYNPNVDVRAVKPRKPKDG
                     ESLACATAELVRGAVAETLKYSTKPADMVADPEWFLELTRQTHKRRFVATGGALKDVLK
                     LDQETDADMVIGDDISEGDDDGSRIAFEWKTEVRKYRRSPTKDKTESG"
                     /name="protein rep"
     gene            1422..1658
                     /locus_tag="HS172_RS00010"
     CDS             1422..1658
                     /locus_tag="HS172_RS00010"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="WP_000263637.1"
                     /translation="MWECRTAHARSDIPHLVRASPRHPANASRHAKKFRVPLTVLELVK
                     QKIAGPRASGVGSDFVIDDGTGKTLGMVVGVTE"
                     /name="hypothetical protein"
     Typing          complement(1072..1153)
                     /name="MOBP"
                     /typing="oriT"
                     /tool="MOB-suite"
                     /identity="95.181"
                     /coverage="83.0"
                     /evalue="8.21e-29"
     Typing          1416..1494
                     /name="MOBP"
                     /typing="oriT"
                     /tool="MOB-suite"
                     /identity="96.25"
                     /coverage="83.0"
                     /evalue="8.21e-29"
     Typing          complement(800..991)
                     /name="ColpVC"
                     /typing="replicon"
                     /tool="MOB-suite"
                     /identity="100.0"
                     /coverage="100.0"
                     /evalue="2.83e-96"
ORIGIN
        1 ttcgaattag tgacacgaca acacaggtga tatggcaatg ataacacgtc agatgagcca
       61 tcgcccacaa tcgggtggtg cgcatgaaaa accctaaact ccagtacctc actgattatt
      121 ccccctctga cgcgccctgg gacgcacaca gaagcgtttc tgacgacgtg ggagggattt
      181 acctgcttgc ggccgaatat gagcgctacg gggctcgtat ggcctcctgt ggcggtttac
      241 tgcgtttcgg gtggtctacc ctcaaggaaa ccggagaaac gcgtctgagg ctgcgtgagg
      301 cgcatttctg ccgtgtccgg cactgtcctg tctgccagtg gaggcgctcc ctgatgtggc
      361 aagcccgttt ctaccagtcc ctgccgcgta tcgtggcgga ttaccctgat gcccgctgga
      421 tgttcctgac cctgaccgtg cgcaactgtg cgattgggga actgggcgag atgctgaacc
      481 ggatgaatgc agcttttcag cgtatgaagg ttcgcaagga gttcctgcct gttcagggct
      541 ggatccgcac aacggaagtt acccgcggca gcgacggcag cgcgcatccc cacttccaca
      601 ccctgatgat ggtgccgccc tcaatgctat ctggtgacgg gtacgtaaaa catgctcgct
      661 gggttgaact ctggcgggag tgcctgcggg tcagttacaa cccgaatgtt gatgtccggg
      721 cagtaaaacc ccgtaagcca aaggatggcg agtccttagc ctgcgcgacc gctgaactgg
      781 tgcgcggcgc agtggccgaa accctgaaat attccacgaa gccggctgac atggtggccg
      841 atcctgaatg gttcctcgaa ctgacccgcc agacgcacaa gcgccgcttt gtggcgaccg
      901 gcggcgcact caaagacgtg ctgaaactcg atcaggaaac cgacgccgac atggtgatcg
      961 gggatgatat ttccgagggc gacgatgacg gttcacgcat cgcgttcgag tggaaaaccg
     1021 aggtcagaaa gtaccgtcgc tcaccgacga aagataaaac tgaatcaggc tagcggggtg
     1081 tcggggcgaa gccctgacca ggtggggaat gtctgagcga gcgtgcgcgg tccgacattc
     1141 ccacatcctg tcccgaaaat tcccgccgtt tctcggtttt ttgagcgtcg cagaccgcac
     1201 gacaaacgaa acgaagtgta gtttgtatga gtgcgcactt cgtgagattc cccgactgcc
     1261 agtttgtcga tcgcgcggaa cagctgtggc acgaaaacgg cagaatgatt tgctgtccgg
     1321 ttgccagaac tgcgcgctta cgtggagggc ggcgcggcgc aaaaaactgc cgacattgcg
     1381 ccagtgttcc ggtgacacaa acccgcagaa atcgggacag gatgtgggaa tgtcggaccg
     1441 cgcacgctcg ctcagacatt ccccacctgg tcagggcttc gccccgacac cccgccaacg
     1501 cctcacggca cgcgaaaaaa ttccgcgtac cgctcaccgt tcttgaactc gtcaaacaga
     1561 aaatcgcggg gccccgcgcc tccggcgtgg gttccgattt tgtgattgac gacggcacgg
     1621 ggaaaacgct gggtatggtg gttggtgtca cggagtgagg ccaaccacct gcaagacggt
     1681 tttttgttgt tcacaaaatt ggggtgaaag tctgtggatg agatgggtgt aagtgggtgg
     1741 ggttgggagg ttttgggtta ctgaaaatcc agctcaaaat tcaagcaaat ctcgcgcgcg
     1801 atccttgtat ttatacttaa gggataactc taggattcaa attggcctcc agcccttgtc
     1861 ccgcaaggct tgagggcaca tttgctccga aatgggttta gaagtattct gtcggaagtg
     1921 gtcgcgttaa aagcgacccc cgcaacgagg gcaatcgttc gggggcgtga ccacctgtag
     1981 aaa
//
