LOCUS       LR792482                5310 bp    DNA     linear   BCT 10-APR-2020
DEFINITION  Salmonella enterica subsp. enterica serovar Typhimurium isolate
            SV68791 genome assembly, plasmid: 46.
ACCESSION   LR792482
VERSION     LR792482.1
DBLINK      BioProject: PRJEB37273
            BioSample: SAMEA6624039
KEYWORDS    .
SOURCE      Salmonella enterica subsp. enterica serovar Typhimurium (Salmonella
            typhimurium)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhimurium
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1
  AUTHORS   Gutierrez,G.
  TITLE     Direct Submission
  JOURNAL   Submitted (06-APR-2020) UNIVERSITY OF SEVILLA, Genetics, U. of
            Seville, PO BOX 1095, 41080, Spain
FEATURES             Location/Qualifiers
     source          1..5310
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhimurium"
                     /mol_type="genomic DNA"
                     /serovar="Typhimurium"
                     /isolate="SV68791"
                     /isolation_source="poultry litter"
                     /sub_species="enterica"
                     /db_xref="taxon:90371"
                     /plasmid="46"
     gene            complement(101..916)
                     /locus_tag="SVL_LOCUS3910"
     CDS             complement(101..916)
                     /locus_tag="SVL_LOCUS3910"
                     /note="unnamed protein product; source:Prodigal:002006"
                     /codon_start=1
                     /transl_table=11
                     /protein_id="CAB3272720.1"
                     /translation="MSHIQRETSCSRQRLNSNLDADLYGYKWARDNVGQSGATIYRLYG
                     KPDAPELFLKHGKGSVANDVTDEMVRLNWLTEFMPLPTIKHFIRTPDDAWLLTTAIPGK
                     TAFQVLEEYPDSGENIVDALAAFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDA
                     SDFDDERNGWPVEQVWKEMHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVGI
                     ADRYQDLAILWNCLGEFSPSLQKRLFQKYGIDNPDMNKLQFHLMLDEFF"
                     /name="SVL_LOCUS3910"
     gene            complement(955..1059)
                     /locus_tag="SVL_LOCUS3911"
     CDS             complement(955..1059)
                     /locus_tag="SVL_LOCUS3911"
                     /note="unnamed protein product; source:Prodigal:002006"
                     /codon_start=1
                     /transl_table=11
                     /protein_id="CAB3272721.1"
                     /translation="MMLVWPDFHMAGTTLCLKISDVTLHKIKIYHHEQ"
                     /name="SVL_LOCUS3911"
     gene            complement(1056..1436)
                     /locus_tag="SVL_LOCUS3912"
     CDS             complement(1056..1436)
                     /locus_tag="SVL_LOCUS3912"
                     /note="unnamed protein product; source:Prodigal:002006"
                     /codon_start=1
                     /transl_table=11
                     /protein_id="CAB3272722.1"
                     /translation="MNLQQRINKLPQLSSSFSFGKDIDNIHSFIFNETSKDKIEDLLRK
                     WVSGNQPCVFGKLASKKIKGLDFHLSIVNSPQLYNDDGHLFDFLRNERVHAMFLDYEAA
                     KDYATRSRLVTAANIPSFGAPE"
                     /name="SVL_LOCUS3912"
     gene            complement(1917..2150)
                     /locus_tag="SVL_LOCUS3913"
     CDS             complement(1917..2150)
                     /locus_tag="SVL_LOCUS3913"
                     /note="unnamed protein product; source:Prodigal:002006"
                     /codon_start=1
                     /transl_table=11
                     /protein_id="CAB3272723.1"
                     /translation="MTELERHLLNALEQLQQDYMQRLNEWENAFVELQKMFSLTQRDNA
                     MLNGRVMQLSQQVQHLSERTERLSQLYSENRR"
                     /name="SVL_LOCUS3913"
     gene            complement(2157..2687)
                     /locus_tag="SVL_LOCUS3914"
     CDS             complement(2157..2687)
                     /locus_tag="SVL_LOCUS3914"
                     /note="unnamed protein product; source:Prodigal:002006"
                     /codon_start=1
                     /transl_table=11
                     /protein_id="CAB3272724.1"
                     /translation="MSNLLQTGAEFEKKLKERAESTEKMLNDEFRKLEESVNRELTSNE
                     SLIRNAINDHTTALKELLERYQKTTVDTMDAHWKTVLKMSVKRWLWLIIVSVLMFATTG
                     SLLWYQGMKINANMNILREQKESLEKLNAKTWGVRYHEDSNGRFLVLPKGMKAETNWTK
                     DNGKLNAVRLVQE"
                     /name="SVL_LOCUS3914"
     gene            complement(3365..3721)
                     /locus_tag="SVL_LOCUS3915"
     CDS             complement(3365..3721)
                     /locus_tag="SVL_LOCUS3915"
                     /note="unnamed protein product; source:Prodigal:002006"
                     /codon_start=1
                     /transl_table=11
                     /protein_id="CAB3272725.1"
                     /translation="MGVMIPMKRERMLTIRVTDDEHARLLERCEGKQLAVWMRRVCLGE
                     PVARSGKLPTLAPPLLRQLAAIGNNLNQTARKVNSGQWSSGDRVQVVAALMAIGDELRR
                     LRLAVREQGARDDS"
                     /name="SVL_LOCUS3915"
     gene            3753..3944
                     /locus_tag="SVL_LOCUS3916"
     CDS             3753..3944
                     /locus_tag="SVL_LOCUS3916"
                     /note="unnamed protein product; source:Prodigal:002006"
                     /codon_start=1
                     /transl_table=11
                     /protein_id="CAB3272726.1"
                     /translation="MTKQEKTALNMARFIRGQTLTLLEKLNELDADEQADICESLHDHA
                     DELYRSCLARFGDDGENR"
                     /name="SVL_LOCUS3916"
     gene            4837..4937
                     /locus_tag="SVL_LOCUS3917"
     misc_RNA        4837..4937
                     /locus_tag="SVL_LOCUS3917"
                     /note="source:Infernal:001001"
     ARG             complement(105..916)
                     /name="aph(3')-Ia"
                     /gene="aph(3')-Ia"
                     /gene_name="aminoglycoside O-phosphotransferase APH(3')-Ia"
                     /tool="amrfinderplus"
                     /drug_class="AMINOGLYCOSIDE"
                     /identity="100.0"
                     /coverage="100.0"
     Typing          complement(4039..4120)
                     /name="MOBP"
                     /typing="oriT"
                     /tool="MOB-suite"
                     /identity="100.0"
                     /coverage="100.0"
                     /evalue="1.3400000000000002e-35"
     Typing          complement(4577..4764)
                     /name="rep_cluster_2401"
                     /typing="replicon"
                     /tool="MOB-suite"
                     /identity="100.0"
                     /coverage="100.0"
                     /evalue="4.63e-94"
     Typing          complement(1814..3375)
                     /name="MOBP"
                     /typing="relaxase"
                     /tool="MOB-suite"
                     /identity="100.0"
                     /coverage="100.0"
                     /evalue="0.0"
ORIGIN
        1 gggtgtgctc gatgccatcg acatgctgcg cggcatgaac agcgacagcg cgcgcaaggt
       61 gcccgccgat gcgccaaccg cattcattaa agactaacta tcagaaaaac tcatcgagca
      121 tcaaatgaaa ctgcaattta ttcatatcag gattatcaat accatatttt tgaaaaagcc
      181 gtttctgtaa tgaaggagaa aattcaccga ggcagttcca tagaatggca agatcctggt
      241 atcggtctgc gattccgact cgtccaacat caatacaacc tattaatttc ccctcgtcaa
      301 aaataagatt atcaagtgag aaatcaccat gagtgacgac tgaatccggt gagaatggca
      361 aaagcttatg catttctttc cagacttgtt caacaggcca gccattacgc tcatcatcaa
      421 aatcactcgc atcaaccaaa ccgttattca ttcgtgattg cgcctgagcg agacgaaata
      481 cgcgatcgct gttaaaagga caattacaaa caggaatcga atgcaaccgg cgcaggaacg
      541 ctgccagcgc atcaacaata ttttcacctg aatcaggata ttcttctaat acctggaatg
      601 ctgttttccc ggggatcgca gtggtgagta accatgcatc atcaggagta cggataaaat
      661 gcttgatggt cggaagaggc ataaattccg tcagccagtt tagtctgacc atctcatctg
      721 taacatcatt ggcaacgcta cctttgccat gtttcagaaa caactctggc gcatcgggct
      781 tcccatacaa tcgatagatt gtcgcacctg attgcccgac attatcgcga gcccatttat
      841 acccatataa atcagcatcc aggttggaat ttaatcgctg cctcgagcaa gacgtttccc
      901 gttgaatatg gctcataaca ccccttgtat tactgtttat gtaagcagac agttttattg
      961 ttcatgatga tatattttta tcttgtgcaa tgtaacatca gagattttga gacacaacgt
     1021 ggttcccgcc atatgaaaat ccggccagac caacatcatt ctggcgctcc gaaagaaggg
     1081 atattcgccg ccgtgaccag cctggagcgg gtcgcataat ctttggccgc ttcgtagtcg
     1141 aggaacatgg catgaactct ttcattacgc aaaaaatcaa acaaatgacc atcatcatta
     1201 tatagttggg ggctatttac aatagataaa tggaaatcaa gccctttaat tttcttgctt
     1261 gccaatttac caaatacaca gggctgattg cctgacaccc attttcttag taaatcttca
     1321 attttatctt tagaagtttc gttaaagata aatgaatgaa tattatcaat atcttttcca
     1381 aatgaaaaac tggatgataa ttgtggtagt ttatttatac gttgttgaag attcatgaaa
     1441 gctcccacaa gacacctcat atattttttt atatactgaa actacattat atttattacc
     1501 ggcgtaaaac gaaataattt attatcgtta ccgatatttt aaaaaaatca ttatttgcac
     1561 agtgttcgag ttgttagtat cactccttcc tgaaaatccg ctccatttac cataacgtcg
     1621 cattgtacgc accgccaaaa cgcgttcggt gcgatcacgg cagcagacag gtaaaaatgg
     1681 caacaaacca cccgaaaaac tgccgcgatc gcacctgata aattttaacc gcatgaatac
     1741 ctatgcaacc agatgctaca ggccacatta gcccgcctta atccactgaa cacgtcattt
     1801 ttcatggttt caccatccca gcgaagggcc atccagtgtc cgctcctgga tttccggctg
     1861 acgctcccgc tccagagata actcatgttc gcgttcctgc atcagccgtt catcccttat
     1921 ctcctgttct cgctgtataa ctggctcaag cgttctgtcc gctcgctcaa gtgctgcacc
     1981 tgctgactca actgcatgac tcgcccgttc agcatcgcgt tgtcccgttg cgtaagcgaa
     2041 aacattttct gcaattccac gaaggcgttc tcccattcgt tcagccgctg catatagtcc
     2101 tgttgcagtt gctctaatgc gttcagcaaa tgtctttcca gctccgtcat gctctgtcac
     2161 tcctgcacca gtctcactgc gttcagtttg ccgttgtcct tcgtccagtt cgtttcggct
     2221 ttcatcccct tcggcaacac cagaaaacgt ccgttgctgt cctcgtgata acgcacgccc
     2281 catgtcttcg cgttcagctt ctccagactc tctttctgct cgcggagaat attcatattc
     2341 gcgtttatct tcatgccctg gtaccacagc agactcccgg tcgtggcaaa catcagtact
     2401 gagacgataa tcagccacag ccagcgtttc acgctcattt tcagtacggt tttccagtgc
     2461 gcgtccatcg tatcgacggt cgttttctga tacctctcca gcagttcttt cagggctgtt
     2521 gtatggtcgt tgatagcgtt cctgattaaa gattcgtttg aggtcagttc cctgtttaca
     2581 gattcttcga gcttcctgaa ctcgtcgttc agcattttct ctgtagattc ggctctctct
     2641 ttcagctttt tctcgaactc cgcgcccgtc tgtaaaagat tgctcataaa acgctccttt
     2701 cagtctgata ttcctcccgc cgttcgggtc tgcaatgctg atactgcttc gcgtcaccct
     2761 gaccacttca agccccgcct ctgtgagcgc ctgaatcaca tcctgacggc cttttatctc
     2821 tccggcatgg taaagcgcgt ctatcccgcg tgtgacgccc tcagcaagcg cctgtttcgt
     2881 ttccggcagg ttatcaggaa gggtcagcgt ccggcggttc tccggggcgt tggggtcatg
     2941 cagaccgtaa tggtgattca ccagcgtctg ccaggcatca attctcggcc tgtctgcccg
     3001 gtcgtagtac ggctggaggc gttttccggt ctgtagctcc atgttcggaa tgacaaaatt
     3061 cagctcaagc cgtcccttgt cctggtgctc cacccacagg atgctgtact gatttttctc
     3121 gagaccgggc atcagtacac gctcaaagct cgccatcact ttttcacgcc ctccaggcgg
     3181 cagctccttc tccgcgaacg acagaacacc tgacgtgtat ttcttcgcaa atggcgtggc
     3241 atcgatgagt tcccggacct cttccggatt cccctgaagc accgttgccc cttcccggtt
     3301 acgctccctt cccagcaggt aatcaaccgg accactgcca ccaccttttc ccctggcatg
     3361 aaacttaact atcatcccgc gccccctgtt ccctgaccgc cagacgcagc cggcgcagct
     3421 catccccgat ggccatcagt gcggccacca cctgaacccg gtcaccggaa gaccactgcc
     3481 cgctgttcac cttcctcgct gtctggttaa ggttattccc gatggcggcc agctgacgca
     3541 gtaacggcgg tgccagtgtc ggcagcttcc cggaacgggc aaccggctca cccaggcaga
     3601 cccgccgcat ccataccgcc agttgtttac cctcacagcg ttccagtaac cgggcatgtt
     3661 catcatcagt aacccgtatc gtgagcatcc tctcgcgttt catcggtatc attaccccca
     3721 tgaacagaac ccccccttac acggaggcat cagtgaccaa acaggaaaaa accgccctta
     3781 acatggcccg cttcatcaga ggccagacat taacgctgct ggagaagctc aacgaactgg
     3841 acgcggatga acaggcagac atctgtgaat cgcttcacga ccacgccgat gagctttacc
     3901 gcagttgcct cgcacgcttc ggggatgacg gtgaaaaccg ctgacacatg cagctcccgg
     3961 agacggtcac agcttgtctg tgagcggatg ccgggagcag acaagcccgc cagggcgcgt
     4021 caggccgttg acctttgggg tgtcggggcg aagccctgac ccagtcacgt agcgatagcg
     4081 gagtgtatac tggcttaacc attcggcatc agtgcggatt gtatgaaaag tgcgccatgt
     4141 ccggtgtgaa atgccgcaca gatgcgtaag gagaaaatgc cagttcaggc gctcttccgc
     4201 ttcctcgctc actgactcgc tacgctcggt cgttcggctg cggcgagcgg actctccttt
     4261 ctcaaaaacg ctaaccctgt tatccacaga acccggggat aaaccaggaa agaacatgtg
     4321 cgcaaaaaac gaaaccccgg gaaaggccgc gccggaggcg ctttttccat aggctccgcc
     4381 cccctgacgg acttcacaaa acagacactt tttcggtgca tctgtgggag ccttgcggct
     4441 caaccatgaa atccgccagc ggtggcgaaa cccgacgtgg cttaaagatc atcaccgttt
     4501 ccggtgaatc gctccctcct gcgcccccac gttcccgcca tatcgattac cggatacctt
     4561 ttccgccttt ctcccttacg ggacacgtgg cgctttctca tagctcacgt cttctggtat
     4621 ctcggggcga cttaggcagt tcgctccggg ctgggctgta tgcaggaacc ccccgttcag
     4681 cccgactgct gcgccttctc cggtaactgt tctcttgggt ccaacccgga aaagacacca
     4741 caaagcgcca ctggcagcag ccattggtaa aagtcatgtg cgagatattt agagagtact
     4801 tgaagtggct gccggagtgc ggctacacta gaagaacaat tttggtgact cgtctcgcat
     4861 aagacagtta cctggttaag cagtctgcaa gctgacttaa ccttcgatca aaccgccctg
     4921 caaggcggtt ttttcgttta caggcagcag attacgcgca gaaaaaaagg atctcaagag
     4981 gatcctttga tctttttgtt acaaacgtct ctatttgact cccctgagag cgttttagcg
     5041 cgcctctgac ccccttggtt acattccgac accagaaacg ctcccgtttt ttacgtgcat
     5101 ttggcacggt atcgatggag gctggggggc aatcctcgag gccgttatgc cctgggacac
     5161 cttcgccgcc agcgtcaccg aagcgcaaac attggcgcgg cctgccgact ttgatttcct
     5221 gcaccacatc ggtgaaagct atgccacgct acgccgctac gcgccgcagt tcctgggcgt
     5281 gctcaaattg cgggctgcgc ccgccgccaa
//
