LOCUS       LR792420                2562 bp    DNA     linear   BCT 10-APR-2020
DEFINITION  Salmonella enterica subsp. enterica serovar Typhimurium isolate
            SV68221 genome assembly, plasmid: 30.
ACCESSION   LR792420
VERSION     LR792420.1
DBLINK      BioProject: PRJEB37272
            BioSample: SAMEA6624038
KEYWORDS    .
SOURCE      Salmonella enterica subsp. enterica serovar Typhimurium (Salmonella
            typhimurium)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhimurium
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Salmonella.
REFERENCE   1
  AUTHORS   Gutierrez,G.
  TITLE     Direct Submission
  JOURNAL   Submitted (06-APR-2020) UNIVERSITY OF SEVILLA, Genetics, U. of
            Seville, PO BOX 1095, 41080, Spain
FEATURES             Location/Qualifiers
     source          1..2562
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhimurium"
                     /mol_type="genomic DNA"
                     /serovar="Typhimurium"
                     /isolate="SV68221"
                     /isolation_source="poultry litter"
                     /sub_species="enterica"
                     /db_xref="taxon:90371"
                     /plasmid="30"
     gene            complement(178..278)
                     /locus_tag="SVZ_N_04574"
     misc_RNA        complement(178..278)
                     /locus_tag="SVZ_N_04574"
                     /product="RNAI"
                     /inference="COORDINATES: profile:Infernal:001001"
                     /note="ID:N_04574; RNAI; source:Infernal:001001"
     gene            complement(1760..1948)
                     /gene="rop"
                     /locus_tag="SVZ_N_04575"
     CDS             complement(1760..1948)
                     /gene="rop"
                     /locus_tag="SVZ_N_04575"
                     /standard_name="rop"
                     /inference="ab initio prediction:Prodigal:002006"
                     /inference="similar to AA sequence:UniProtKB:P03051"
                     /note="ID:N_04575; source:Prodigal:002006"
                     /codon_start=1
                     /transl_table=11
                     /product="Regulatory protein rop"
                     /protein_id="CAB3275927.1"
                     /translation="MNRQESAVLNMAKFIRAQTLLLLERIDLLDFDDEATDCEQLHEQA
                     EALYRKLSARLESDITA"
                     /name="rop"
     gene            complement(2200..2517)
                     /locus_tag="SVZ_N_04576"
     CDS             complement(2200..2517)
                     /locus_tag="SVZ_N_04576"
                     /inference="ab initio prediction:Prodigal:002006"
                     /note="ID:N_04576; source:Prodigal:002006"
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="CAB3275928.1"
                     /translation="MKKIFILSAALIMAGCATKQYPQAANVTGPESSAMDCKAVALEIA
                     KTRSVQQEIEATGEFDGRTVLGFLGDFGIGNGMAKGEARKKAANRLNQLEALKAAKCAD
                     Q"
                     /name="hypothetical protein"
     Typing          831..1004
                     /name="MOBP"
                     /typing="oriT"
                     /tool="MOB-suite"
                     /identity="93.143"
                     /coverage="100.0"
                     /evalue="2.63e-66"
     Typing          complement(362..907)
                     /name="rep_cluster_2335"
                     /typing="replicon"
                     /tool="MOB-suite"
                     /identity="91.091"
                     /coverage="90.0"
                     /evalue="0.0"
ORIGIN
        1 atcggcagga aatgagggtt ttttagttga attttgggag gggcaaggtt ccatattggt
       61 cgaggattct ggagctgacc ggcaacggcc agcgcggcta tgggccatgc ggtggttgag
      121 catagaaagg atcttcttga gttccttttt ttctacgcgt aatctcttgc tctgaaaacg
      181 aaaaaaccac ctggggaggt ggtttttcga aggttaagtc agttggggaa ctgcttaacc
      241 tggtaactgg cttcagcaga gcgcagatac caaatactgt ccttccagtg tagccgtagt
      301 taggccacca cttcaagaac tctatagcac catctacatt aactcgctct gctaatcctg
      361 ttaccagtgg ctgctgccag tggcgctttg tcgtgtcttt ccgggttgga ctcaagacga
      421 tagttaccgg ataaggcgca gcagtcggac tgaacggggg gttcgtgcat acagtccagc
      481 ttggagcgaa ctgccttccc ggaaccgagt gtcaggcgtg gaatgagaaa ccgcggccat
      541 aacagcggaa tgacaccggt acaccgaaag gcaggaacag gagagcgcac gagggagcca
      601 ccagggggaa acgcctggta tctttaagtc ctgtcgggtt tcgccaccac tgatttgagc
      661 gtcagatttc gtgatgcttg tcaggggggc ggagcctatg gaaaaacggc aacgccgtgg
      721 ccttgcttct tctttgctaa gtattgccct ggcatcctct aggaaatttc cgcccagttt
      781 gtaagcccac accgctcgcc gcagccgaac gaccgagcgc agcgagtcag tgagcgagga
      841 agcggaatat ctcctgtctc gtatattctg ctgacgcgcc ggtgccgcct ttttcctcct
      901 tccacatgaa gcacttcact gacctccgca tccgtgtcga catattaagc cagtatacac
      961 tccgctagcg ctgcgtgact ggttcagggc tgcgccccga aacccgtcaa cagcctgacg
     1021 cgcctgcggc ttgtccaacc ccgcgccgac cgggaaagct tttcccgccc gtcacggcgt
     1081 tatcaggaga ctggtttgtc cgagaaacgg aacaagatgc tcaccatgtg ggggacggag
     1141 gatgagcacc ggctactgct ggaacgctgc gggggtacac agctttctgc atgggtgcgc
     1201 ccgtctgcta tgtctgttcc tcctagtttt ggtgggtgct tatatctcta ctaaatggca
     1261 taacatgtca ctactaaccg cgatgctaaa gcgggctgtt tttcaaagta ttaccggccc
     1321 ccgtgccggt tttttttctt accggaaggg gcttcgtgtt tattgatgtt ctgattttcg
     1381 gagggtgtac tgatcgcctt gccaggcgac gcgaggaagg acatatttac gacgaggtac
     1441 tttctgtact ttagggaagg tgtggcagat gagctgaccc agatacattt ctggcgtgtc
     1501 gttagtgcat tatatcccga ggcatttaac cgtattgatt acctccctga ttctcgtaaa
     1561 taccgtctct ggttatcctg atttttaatc tcgtcactgc ttgcttaccg ttccagtctg
     1621 tattgtctgc atttttcttt catactgagt gcctcacgac ccgtaataaa ttccgtgtcc
     1681 gttcatcctt gagcgacgac tggaggatga agatctctca aaagatgatg tggatgccat
     1741 gatgcaggcg acggaaaggc taagccgtta tgtctgattc cagtcgggcg ctgagcttcc
     1801 ggtaaagcgc ttcggcctgc tcatgcagct gttcgcagtc tgtcgcttcg tcatcgaagt
     1861 cgagcaggtc aattctttcc agcaggagga gtgtctgggc gcggataaat ttagccatgt
     1921 tgagaacggc ggattcctgg cggttcatgt gtgtttttcc gtgtcttgtg atgattttga
     1981 tgtgaaaaca ggatgccgtc attctggtgc atagtcatgc atggcgttaa aatttaccta
     2041 gcacgtttct ggcggctttt cgggtggttt gttacctgtt ttaccgtaca gccgtcagaa
     2101 acgcgctgaa gggttctcag gaggtgcaga caacggatgt tatggtaaat ccagctgatt
     2161 ggcaggtata aaaaaagccc cgcagggctt ttttgtacct tattgatctg cacactttgc
     2221 agccttcagg gcttccagct gatttagccg gttagctgct tttttgcggg cttcgccttt
     2281 tgccatgcca tttcctatcc caaaatcacc caggaaacct aatacggtgc gcccgtcaaa
     2341 ttcgccggtt gcctcaattt cttgttgtac actgcgcgtt tttgcgattt ccagagctac
     2401 cgctttgcaa tccattgcgg aagattctgg accggtgacg ttcgcggcct gtggatattg
     2461 ctttgttgcg catcctgcca tgatcagcgc tgccgatagg atgaatattt ttttcaaaat
     2521 tatccttatt ttatttaggc atagttaaga gatacccatt tt
//
