LOCUS       LC784003                2473 bp    DNA     circular BCT 20-MAR-2024
DEFINITION  Staphylococcus aureus C013F09Bc plasmid pTDC06 DNA, complete genome.
ACCESSION   LC784003
VERSION     LC784003.1
DBLINK      BioProject: PRJDB10537
            BioSample: SAMD00249030
            Sequence Read Archive: DRR250796
KEYWORDS    .
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus.
REFERENCE   1
  AUTHORS   Katahira,K., Gotoh,Y. and Hayashi,T.
  TITLE     Draft genome sequence of commensal S. aureus strains
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 2473)
  AUTHORS   Katahira,K., Gotoh,Y., Hayashi,T. and Katsura,K.
  TITLE     Direct Submission
  JOURNAL   Submitted (03-OCT-2023) Contact:Katsuyuki Katahira NHO Omuta
            Hospital, Department of Respiratory Medicine; 1044-1 Oaza,
            Tachibana, Omuta, Fukuoka 837-0911, Japan
COMMENT     ##Genome-Assembly-Data-START##
            Assembly Method       :: platanus v. 1.2.4
            Genome Coverage       :: 97x
            Sequencing Technology :: Illumina Miseq
            ##Genome-Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..2473
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /strain="C013F09Bc"
                     /isolation_source="outpatient"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /plasmid="pTDC06"
                     /geo_loc_name="Japan:Miyazaki"
                     /collection_date="2002"
     CDS             1..477
                     /inference="COORDINATES: ab initio
                     prediction:MetaGeneAnnotator"
                     /note="SAC013F09Bc_p10"
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="BET78966.1"
                     /translation="MKERYGTVYKGSQRLIDEESGEVIEVDKLYRKQTSGNFVKAYIVQ
                     LISMLDMIGGKKLKIVNYILDNVHLSNNTMIATTREIAKATGTSLQTVITTLKILEEGN
                     IIKRKTGVLMLNPELLMRGDDQKQKYLLLEFGNFEQEANEKQENALSDYYSFKD"
                     /name="hypothetical protein"
     gene            1292..2026
                     /gene="ermC"
     ARG             1293..2026
                     /name="ErmC"
                     /gene="ErmC"
                     /gene_name="Erm 23S ribosomal RNA methyltransferase"
                     /tool="rgi"
                     /drug_class="macrolide antibiotic; lincosamide antibiotic;
                     streptogramin antibiotic; streptogramin A antibiotic;
                     streptogramin B antibiotic"
                     /identity="99.59"
                     /coverage="100.0"
     ARG             1293..2023
                     /name="erm(C)"
                     /gene="erm(C)"
                     /gene_name="23S rRNA (adenine(2058)-N(6))-methyltransferase
                     Erm(C)"
                     /tool="amrfinderplus"
                     /drug_class="LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN"
                     /identity="100.0"
                     /coverage="100.0"
     Typing          2..487
                     /name="rep_cluster_1947"
                     /typing="replicon"
                     /tool="MOB-suite"
                     /identity="99.591"
                     /coverage="100.0"
                     /evalue="0.0"
ORIGIN
        1 atgaaagaaa gatatggaac agtctataaa ggctctcaga ggctcataga cgaagaaagt
       61 ggagaagtca tagaggtaga caagttatac cgtaaacaaa cgtctggtaa cttcgtaaag
      121 gcatatatag tgcaattaat aagtatgtta gatatgattg gcggaaaaaa acttaaaatc
      181 gttaactata tcctagataa tgtccactta agtaacaata caatgatagc tacaacaaga
      241 gaaatagcaa aagctacagg aacaagtcta caaacagtaa taacaacact taaaatctta
      301 gaagaaggaa atattataaa aagaaaaact ggagtattaa tgttaaaccc tgaactacta
      361 atgagaggcg acgaccaaaa acaaaaatac ctcttactcg aatttgggaa ctttgagcaa
      421 gaggcaaatg aaaaacaaga aaatgcatta tctgattatt attctttcaa ggactagtat
      481 aacataaaat cgtctacaaa tagacaaaaa acctgcacgc ttaatgtaga tcaaaagctt
      541 aacgcaaatg aaatagattg acctcccaat aacaccacgt agttattggg aggtcaatct
      601 atgaaatgcg attaagcttt ttctaattca cataagcgtg caggtttaaa gtacataaaa
      661 aatataatga aaaaaagcat cattatacta acgttatacc aacattatac tctcattata
      721 ctaattgctt attccaattt cctattggtt ggaaccaaca ggcgttagtg tgttgttgag
      781 ttggtacttt catgggatta atcccatgaa acccccaacc aactcgccaa agctttggct
      841 aacacacacg ccattccaac caatagtttt ctcggcataa agccatgctc tgacgcttaa
      901 atgcactaat gccttaaaaa aacattaaag tctaacacac tagacttatt tacttcgtaa
      961 ttaagtcgtt aaaccgtgtg ctctacgacc aaaagtataa aacctttaag aactttcttt
     1021 tttcttgtaa aaaaagaaac tagataaatc tctcatatct tttattcaat aatcgcatca
     1081 gattgcagta taaatttaac gatcactcat catgttcata tttatcagag ctcgtgctat
     1141 aattatacta attttataag gaggaaaaaa tatgggcatt tttagtattt ttgtaatcag
     1201 cacagttcat tatcaaccaa acaaaaaata agtggttata atgaatcgtt aataagcaaa
     1261 attcattata accaaattaa agagggttat aatgaacgag aaaaatataa aacacagtca
     1321 aaactttatt acttcaaaac ataatataga taaaataatg acaaatataa gattaaatga
     1381 acatgataat atctttgaaa tcggctcagg aaaagggcat tttacccttg aattagtaca
     1441 gaggtgtaat ttcgtaactg ccattgaaat agaccataaa ttatgcaaaa ctacagaaaa
     1501 taaacttgtt gatcacgata atttccaagt tttaaacaag gatatattgc agtttaaatt
     1561 tcctaaaaac caatcctata aaatatttgg taatatacct tataacataa gtacggatat
     1621 aatacgcaaa attgtttttg atagtatagc tgatgagatt tatttaatcg tggaatacgg
     1681 gtttgctaaa agattattaa atacaaaacg ctcattggca ttatttttaa tggcagaagt
     1741 tgatatttct atattaagta tggttccaag agaatatttt catcctaaac ctaaagtgaa
     1801 tagctcactt atcagattaa atagaaaaaa atcaagaata tcacacaaag ataaacagaa
     1861 gtataattat ttcgttatga aatgggttaa caaagaatac aagaaaatat ttacaaaaaa
     1921 tcaatttaac aattccttaa aacatgcagg aattgacgat ttaaacaata ttagctttga
     1981 acaattctta tctcttttca atagctataa attatttaat aagtaagtta agggatgcat
     2041 aaactgcatc ccttaacttg tttttcgtgt acctattttt tgtgaatcga ttatgtcttt
     2101 tgcgcattca cttcttttct atataaatat gagcgaagcg aataagcgtc ggaaaagcag
     2161 caaaaagttt cctttttgct gttggagcat gggggttcag ggggtgcagt atctgacgtc
     2221 aatgccgagc gaaagcgagc cgaagggtag catttacgtt agataacccc ctgatatgct
     2281 ccgacgcttt atatagaaaa gaagattcaa ctaggtaaaa tcttaatata ggttgagatg
     2341 ataaggttta taaggaattt gtttgttcta atttttcact cattttgttc taatttcttt
     2401 taacaaatgt tctttttttt ttagaacagt tatgatatag ttagaatagt ttaaaataag
     2461 gagtgagaaa aag
//
