LOCUS       CP132213                1934 bp    DNA     circular BCT 14-AUG-2023
DEFINITION  Enterobacter hormaechei strain 2022CK-00285 plasmid unnamed4,
            complete sequence.
ACCESSION   CP132213
VERSION     CP132213.1
DBLINK      BioProject: PRJNA288601
            BioSample: SAMN27992995
KEYWORDS    .
SOURCE      Enterobacter hormaechei
  ORGANISM  Enterobacter hormaechei
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Enterobacter; Enterobacter cloacae complex.
REFERENCE   1  (bases 1 to 1934)
  AUTHORS   Hergert,J., Casey,R., Wagner,J., Young,E.L. and Oakeson,K.F.
  TITLE     Pathogen: clinical or host-associated sample
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 1934)
  AUTHORS   Hergert,J., Casey,R., Wagner,J., Young,E.L. and Oakeson,K.F.
  TITLE     Direct Submission
  JOURNAL   Submitted (07-AUG-2023) Utah Public Health Laboratory, Utah Public
            Health Laboratory Infectious Disease submission group, 4431 S 2700
            W, Salt Lake City, UT 84129, USA
COMMENT     ##Genome-Assembly-Data-START##
            Assembly Method                   :: Unicycler v. 0.5.0
            Genome Representation             :: Full
            Expected Final Version            :: Yes
            Genome Coverage                   :: 20.0x
            Sequencing Technology :: Illumina MiSeq; Oxford Nanopore GridION
            ##Genome-Assembly-Data-END##
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 08/08/2023 15:50:17
            Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline
            (PGAP)
            Annotation Method :: Best-placed reference protein set; GeneMarkS-2+
            Annotation Software revision      :: 6.5
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,042
            CDSs (total)                      :: 4,923
            Genes (coding)                    :: 4,807
            CDSs (with protein)               :: 4,807
            Genes (RNA)                       :: 119
            rRNAs                             :: 9, 8, 8 (5S, 16S, 23S)
            complete rRNAs                    :: 9, 8, 8 (5S, 16S, 23S)
            tRNAs                             :: 86
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 116
            CDSs (without protein)            :: 116
            Pseudo Genes (ambiguous residues) :: 0 of 116
            Pseudo Genes (frameshifted)       :: 29 of 116
            Pseudo Genes (incomplete)         :: 87 of 116
            Pseudo Genes (internal stop)      :: 14 of 116
            Pseudo Genes (multiple problems)  :: 15 of 116
            Pseudo Genes (short protein)      :: 2 of 116
            ##Genome-Annotation-Data-END##
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
FEATURES             Location/Qualifiers
     source          1..1934
                     /organism="Enterobacter hormaechei"
                     /mol_type="genomic DNA"
                     /strain="2022CK-00285"
                     /isolation_source="Rectal Swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:158836"
                     /plasmid="unnamed4"
                     /geo_loc_name="USA"
                     /collection_date="2022-04-19"
     gene            complement(join(1729..1934,1..97))
                     /locus_tag="M2O51_25205"
     CDS             complement(join(1729..1934,1..97))
                     /locus_tag="M2O51_25205"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="WLQ00831.1"
                     /translation="MAGSIRARSLYLYLRDNSGDKKWHQALRTKASGLICVVEGFGSIL
                     LGVVALKATPATTAIVRGCDHLQKFDSKRQPTGDTAMITRQMSHRPAWDGVHAKP"
                     /name="hypothetical protein"
     gene            complement(756..1742)
                     /locus_tag="M2O51_25210"
     CDS             complement(756..1742)
                     /locus_tag="M2O51_25210"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001529700.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein rep"
                     /protein_id="WLQ00832.1"
                     /translation="MQNPKLQNLTDYSPSDAPWDAHKSVSDDVGGIYLLAAEYERYGAR
                     MASCGGLLRFGWSTLKETGETRLRLREAHFCRVRHCPVCQWRRSLMWQARFYQSLPRIV
                     ADYPDARWMFLTLTVRNCAIGELGETLNRMNMAFQRLKDRKEFRPVQGWIRTTEVTRGS
                     DGSAHPHFHTLMMVPPSMFTRDYVKHDRWVELWRECLRVNYDPNVDVRAVKPRKPKDGE
                     SLASATAELVRGAVAETLKYSTKPADMVADPEWFLELTKQTHKRRFVATGGALKDILKL
                     DQETDADMVIGDDIPEGDDDGSRIAFEWKTESKKYRRSPSKDKAESD"
                     /name="protein rep"
     Typing          839..1030
                     /name="ColpVC"
                     /typing="replicon"
                     /tool="MOB-suite"
                     /identity="88.601"
                     /coverage="100.0"
                     /evalue="1.39e-59"
ORIGIN
        1 ccgaagcctt ggtacgcaag gcttgatgcc attttttatc gccagagtta tcccttaagt
       61 ataaatacaa ggatcgcgcg cggatcgaac cagccattca acgcccaccc gccaccaaaa
      121 actgccacaa cgccaggagc gaaacagcaa cgctcaacgc actatcaaca tgattaagaa
      181 cctcaaaaaa cataacaacc tcactcgaat ggaattgggt aaatctattt agtctgtgat
      241 ttgcgaaccc atactttttc gcatcacgac agaaccaact ccattcgttc tggttgtatc
      301 cggtaccaga caattaaaaa ccgtcttcca ggtggttggc ctcacttcgt gaatccaacc
      361 acctcagcca atttttcaat cagcaatgtc gtcaatcact aaatcggaac ccactggcaa
      421 gccagcggga ccccacgatt tagagtttga cgatttcgga aacggcgagc gctggcagat
      481 tttaatctga ctgcgtgagg tgttggcagg gtgtcggggc gcagccctga cgaatcattt
      541 ttggcaccga catcgtgatg gcggtgtacc aaaaacacat cttgtcccaa ctgagttcgg
      601 aaaccgaact cagtaattga gtgacgtcac tttgcggcgt tagccctatc ctgcatcgga
      661 gtagaaccaa taggacaaga tgtgtttttg gagtaccgcc gacaagcggc gccctctcaa
      721 aaacgtcgtg gtcagggctg cgccccgaca ccctgtcagt ctgattcagc tttatctttt
      781 gacggtgagc gacggtactt tttggattcg gttttccact caaaagcaat gcgtgaacca
      841 tcatcatcgc cttcgggaat atcatccccg attaccatat cggcatcagt ttcctgatcg
      901 agtttcagta tgtctttgag tgcgccaccg gtagccacaa atcggcgctt atgtgtctgc
      961 ttagtcaatt cgaggaacca ttcaggatca gcaaccatgt cagccggctt cgtggaatat
     1021 ttcagggttt cagccactgc gccccgtaca agttccgcag ttgcagaagc caatgattct
     1081 ccgtccttag gcttgcgggg ttttactgct cgaacatcaa cattcggatc gtaattcaca
     1141 cgcaaacact ctcgccaaag ctctacccag cggtcatgtt taacgtaatc tcgcgtgaac
     1201 attgagggag gaaccatcat cagagtgtga aagtgcgggt gcgcactacc gtcacttcca
     1261 cgtgtaactt ccgtggtgcg gatccagccc tgaacaggtc gaaactcttt gcgatcctta
     1321 agtcgctgga aggccatgtt cattcggtta agtgtctcac ccaattcccc gatcgcgcag
     1381 tttcgcactg tgagggtcag gaacatccag cgtgcatctg gataatccgc aacaatacgc
     1441 ggcagggact gataaaaacg ggcttgccac atcagggatc gcctccactg gcagacagga
     1501 cagtgccgga cacggcagaa atgcgcctca cgtagcctaa ggcgagtttc tccagtttct
     1561 ttgagggtag accaaccaaa cctcagtaaa ccgccacagg aagccatacg cgccccgtag
     1621 cgctcatatt cggctgcgag aaggtaaatc ccacctacgt cgtcagaaac gcttttgtga
     1681 gcgtcccagg gcgcgtctga gggggagtaa tccgtgaggt tctggagttt agggttttgc
     1741 atgcacaccg tcccatgctg ggcgatggct catttgacgt gttatcattg ccgtatcacc
     1801 tgttggttgt cgcttcgaat cgaatttctg caggtggtca cacccccgaa cgatggccgt
     1861 cgttgcgggg gtcgctttta aggcgaccac tcccaacaga atacttccaa aaccttctac
     1921 aacgcaaata agcc
//
