LOCUS       CP124773                8134 bp    DNA     linear   BCT 11-MAY-2023
DEFINITION  Klebsiella michiganensis strain 2022CK-00495 plasmid unnamed11.
ACCESSION   CP124773
VERSION     CP124773.1
DBLINK      BioProject: PRJNA288601
            BioSample: SAMN31152636
KEYWORDS    .
SOURCE      Klebsiella michiganensis
  ORGANISM  Klebsiella michiganensis
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Klebsiella/Raoultella group; Klebsiella.
REFERENCE   1  (bases 1 to 8134)
  AUTHORS   Hergert,J., Casey,R., Wagner,J., Young,E.L. and Oakeson,K.F.
  TITLE     2022CK-00495
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 8134)
  AUTHORS   Hergert,J., Casey,R., Wagner,J., Young,E.L. and Oakeson,K.F.
  TITLE     Direct Submission
  JOURNAL   Submitted (28-APR-2023) Utah Public Health Laboratory, Utah Public
            Health Laboratory Infectious Disease submission group, 4431 S 2700
            W, Salt Lake City, UT 84129, USA
COMMENT     ##Genome-Assembly-Data-START##
            Assembly Method                   :: Flye v. 2.9.1
            Genome Representation             :: Full
            Expected Final Version            :: Yes
            Genome Coverage                   :: 126.0x
            Sequencing Technology :: Oxford Nanopore GridION; Oxford Nanopore
            MinION
            ##Genome-Assembly-Data-END##
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 05/01/2023 13:40:56
            Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline
            (PGAP)
            Annotation Method :: Best-placed reference protein set; GeneMarkS-2+
            Annotation Software revision      :: 6.5
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,393
            CDSs (total)                      :: 7,273
            Genes (coding)                    :: 7,098
            CDSs (with protein)               :: 7,098
            Genes (RNA)                       :: 120
            rRNAs                             :: 9, 8, 8 (5S, 16S, 23S)
            complete rRNAs                    :: 9, 8, 8 (5S, 16S, 23S)
            tRNAs                             :: 86
            ncRNAs                            :: 9
            Pseudo Genes (total)              :: 175
            CDSs (without protein)            :: 175
            Pseudo Genes (ambiguous residues) :: 0 of 175
            Pseudo Genes (frameshifted)       :: 59 of 175
            Pseudo Genes (incomplete)         :: 121 of 175
            Pseudo Genes (internal stop)      :: 30 of 175
            Pseudo Genes (multiple problems)  :: 29 of 175
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
FEATURES             Location/Qualifiers
     source          1..8134
                     /organism="Klebsiella michiganensis"
                     /mol_type="genomic DNA"
                     /strain="2022CK-00495"
                     /isolation_source="Rectal Swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:1134687"
                     /plasmid="unnamed11"
                     /geo_loc_name="USA"
                     /collection_date="2022-02-25"
     gene            2665..2961
                     /locus_tag="QJQ59_05925"
     CDS             2665..2961
                     /locus_tag="QJQ59_05925"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="WGZ97657.1"
                     /translation="MIKENICVLMAALGHKMTHENQDTYRNLLVFERDQTGYTVNKEQR
                     SWAFPLQVGIINTQSSQWTGATFDRTTEIRTDTSLQEWTYYVTQKPMEDYGMS"
                     /name="hypothetical protein"
     gene            4336..4611
                     /locus_tag="QJQ59_05930"
     CDS             4336..4611
                     /locus_tag="QJQ59_05930"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="WGZ97658.1"
                     /translation="MIVDDFETEAWLLVPGNLVHTAFRSKLDGLFLKKPVYSYGPRGGT
                     FSSHYSFVTGGFWFLHATSAHTGIINTLNFGSTMAVHPCANRDRIS"
                     /name="hypothetical protein"
     gene            4970..5098
                     /locus_tag="QJQ59_05935"
     CDS             4970..5098
                     /locus_tag="QJQ59_05935"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="WGZ97659.1"
                     /translation="MTNGLVVFPLLVFNSYSKRRFHQLQKAVVPLVPERLKVIWQF"
                     /name="hypothetical protein"
     gene            5317..5505
                     /locus_tag="QJQ59_05940"
     CDS             5317..5505
                     /locus_tag="QJQ59_05940"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="WGZ97660.1"
                     /translation="MDQLDGQELIAAGRLITPWRLLASFDFVDEHQWTVAGYAVRLVLF
                     VGVGTLLGGYLGSLVIW"
                     /name="hypothetical protein"
     gene            complement(7342..7485)
                     /locus_tag="QJQ59_05945"
     CDS             complement(7342..7485)
                     /locus_tag="QJQ59_05945"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="WGZ97661.1"
                     /translation="MFEVTEIIDLSSEKNQARSGFTYQLQAQTGIDAAKPKDQFSKTAV
                     IA"
                     /name="hypothetical protein"
     gene            complement(7791..>8134)
                     /locus_tag="QJQ59_05950"
     CDS             complement(7791..>8134)
                     /locus_tag="QJQ59_05950"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="WGZ97662.1"
                     /translation="TSADVKTPTEFPPIQEKFIGKFKCWSRIKFAKRVDQDIEKSIRQV
                     GMFAGPINATTNAEKVPAEPNQAAMSSEHRSAKRHRRQADHKYSNTSCRKRIRVREFHH
                     TTELCSSFS"
                     /name="hypothetical protein"
ORIGIN
        1 ttgcttacac aaaacccacc ataactctca atttgggatt gttgtttccc tccacgtttt
       61 ctacttgtga cagtacacac gatttctgtg cttcttctcg ctgctactga catgctgccg
      121 caatagaaca acaatctctc tctgctatta ctgtttctgg gtgtagaatt taaatatgac
      181 tgagttttaa gggctgtttg tcaatcgttt ttatcagacg tgtttccttt atgtgatgaa
      241 tacatttaat tacattcgac tcttgtaacc aattactcca tttcagaaga tgataatatg
      301 attccttatt tatcatttat tcgaatctcc ttttgtcaaa agagaaaaga aatttctggt
      361 tatattcatt tgaacaggca ttaggattat agttcatttt ccatctgaag caacatcgtt
      421 tcatttgaat gacattcagg ctgttgcgtt tgaaatttcg ttggaaactt aagcggtttt
      481 taaatgacat tcggatgtat agtttgttat ttgttttttt gtctcgaaga ctggctgctt
      541 ttgctgactt ctttgtagat cgcttacctc tgatgggcgt catagtgcca cggactcttc
      601 aaaactgctg gcaggcacaa aactgctgag caaggaacca ctggtcaagt ttgggcgtgt
      661 agttttaaat caaagatgaa agggctgtta caggctcgaa aaaggggact aagcagtccg
      721 gtttggatat ccgtttggct gctgcatgaa aataaccagc aggcaactta atcatttggt
      781 atctgacatc gatttagctc tgcccttact actgcggaat tccagagaag cgaacgttac
      841 taaaaaagtg atgatgaatt gaaggattac gaggactcgg tgaaaaatgt gaccgtcgac
      901 gacaagtcca tcgcgaactt catggaagtg cacgccggtg aaacaagcac gccgacctcg
      961 ctgactaatt gattaaatac agatgacgtg acgacatcgt cgatcatgat ttaccggact
     1021 tccaagatcg caaaccagtt gaagacgtca agctttgccg tgttcaccgg cacacacgcc
     1081 gaagtgccga cgaatttccc gtttgccgtg aaaatttgac ggacaactgc gggaatttgg
     1141 caagtcgctg tttgaattgt tcataatcga gaaggctgat ctggagagca gatggccgtt
     1201 gatttatgtc cttcttttgg tccccgtctg gggtgttact tttcgtggtt gctaacgttc
     1261 tccttctggg gacagaggct gagttcgtgt tctcaagtgg aagccgttgt catcgtggtg
     1321 gtcgtcttgt cgatggtttg gaggaggact caggaggctg atatcgggtg gccgtttcga
     1381 cattgttgat gggcttttca ccttcaactg gtttgccagt acgggggtca gctcggtgat
     1441 gcgtcccgga ttatccggat gattatttgg gctcggccat ccgtgtttgg tcacgttatc
     1501 atttcttggt ggtgtggtgc taacaacaat tgatcgatta agttgataaa gaagacatcg
     1561 atgcaattcg gggtcggcat tttagcgggc aagcagtcga ctactggcct ctgggattga
     1621 aggaagcaat gtctttgctg atgtgttggt tgaccagttg ataacaagtg cgtgtgatgg
     1681 tatggatgat ggctataccc tgactgggtc aatggaagcc gcaattgacg aagacgcttt
     1741 gtgatgctga tcgctcggcg ttagccacaa cggccgccgc tgtctggtac ttggacgact
     1801 aacctcgggg cgccgatctc gctaaagaag tttccgactg ctgaacggcc atcgtgatgt
     1861 tattgtcgat cgccgccgcc aagacgttcg tttttaatgg cggtgaagat gggaggaacg
     1921 gacggggttg acggtcattg acatcgtcgg tctagtgatt caacggcggg tggccacggt
     1981 aatgtggtcc atcgatggga tcaaagtacg gggtgctgga aaactcgggg tggcggtcaa
     2041 cagggctgta gatgttcaca acggaaaaaa ctgaagtcgt cttgctgatg atgacctttg
     2101 aaagcggcgc ctttgagttc aagttcgagt ttattgaaca attcaacaag gtgtacttgt
     2161 aatctgtgtg gtccacaggg gttactgttg atgatctacc tacgaaggcg aagctctcgt
     2221 cgtctttaac ggacgcttct ggaggaaaca cctgttgttt aaggtgaggt atgatcttcg
     2281 acacttattt taatgccatt gatttcaaca tgaatatggc aaaaggctga tggtatggct
     2341 gaacagattt tcgatgctgg gcacttaaca aacataacga acactcctcc acaggaacca
     2401 tgattgcaaa aactgttgct taccacatga tatggttgat tatttcaggt tatactaggg
     2461 tagatggacc tataactgaa aaacagaaca ctacagttct caggctcttg ctcagaagat
     2521 ttgttcaagg ttgtttgcta ctataaaaca acttgaacga catcgaacaa caacagaact
     2581 gctcttgccg ttgactacaa aaatttattg aaactctgat gtgctatgac agacacgcct
     2641 gcctcctttg aggaaagttg accaatgatc aaagaaaata tttgcgtttt gatggctgcg
     2701 cttggacata aaatgactca tgaaaaccag gacacataca gaaatttact ggtttttgag
     2761 agggatcaaa ctggatatac cgtgaacaaa gaacaaagga gctgggcttt tccattgcag
     2821 gttgggataa ttaacaccca atcttcccaa tggacaggag caacgtttga cagaactaca
     2881 gagatacgaa cagacacaag tttgcaggaa tggacttact atgttaccca gaagccgatg
     2941 gaggactatg gcatgagcta aagcaaacgg actggggact cgaactggtt tcctcaaaga
     3001 ccaaagcctg aacgccagga aatggatgcg atggggaacc atcagacttt gacaaaaaag
     3061 ggggaagtca gtgacaaact ggagctgcag aactcccatt gctatcagca aaccatggca
     3121 agaaaagaac aaacgggctg cgtgcttctc agtacccatt tgacccggcc atctcagcaa
     3181 attcatacta acatgaggct ggcataatta accaacaaaa agaaacgact cacagatgca
     3241 gatattgagc ttgggtttcg aaaaaccgat tattttcgtc cccttgattt tccaaacgtc
     3301 gaaccgacgc ctcacgctgg aaatgagcca agaaaaggat gtggtcgcgg caggtgaata
     3361 cttggcttcg cactgctgcc gatacggcaa gatggaattg agctggcata acttcatgac
     3421 ctgctacaca atttcgcaaa gactgggaac gaatgaacat ccggatcgtc acagcatgtg
     3481 gtcgttttag gagcacaccg ctggggctgg aatggggact gatgtgacaa ttaagctggt
     3541 tactgtttta gaagcggttt gtggatttgg agcagaggat taaagatggc cggtatgtaa
     3601 ctacgagccg cgagcgctat ctcaccatat gaagtttgga caaacacaaa tgtcagattt
     3661 tgtgacaata attctgataa ggtaacgtct tgatccggtg gagatggcct cctttgtgat
     3721 tcttggcttt gtgacagaca ctgatgcggc tatgctgatt ggtggaaata gtattccccc
     3781 ttttcgcgga cgttctccct ccatcttgca gtatgcaggc gatgttccag ttgttacggt
     3841 gatagaatgt gacataatga accgatgaag tacagaatcc ccgactcttg agactcggtc
     3901 atggtggaac taaagatgag atcaggtgtc tctgaaatgg ttctactgac attcctcctt
     3961 tattttattt ttaccggcat ttgcctccct aattcatgtc cctttgtcga cttgtttgga
     4021 ttcaattctc agaacaggtt gtttcaacaa tttgctctgc ctccatttga gagcatttaa
     4081 caggcccaaa ctaagtcagc aggaactctg aaaaacataa cgacaggttt tgcttttttg
     4141 attttccttt gaggtaatta tccttcaccc cagctaattt cggcgctggc tatcggcggc
     4201 ggcgctggcg attggtgact tgctggcgct cgaaactgcc tttctgaccg tcgatgttcg
     4261 tcgccgcctc ggtgatggtg ctggcgacaa tacggcctgg atgaatccag gctttcggga
     4321 tgctcaggga ctacgatgat cgttgacgac tttgaaaccg aggcctggtt actggttccg
     4381 ggaaacctgg ttcacaccgc gtttcgctcg aagctggacg gcttattttt gaaaaagccg
     4441 gtttattcgt atggcccgcg tggcgggact ttttcttctc attactcgtt tgtaactggg
     4501 ggtttctggt tcctgcatgc cacctcggca catacgggca ttattaacac gctcaatttt
     4561 ggctcgacaa tggccgtaca tccctgtgcc aaccgggatc gcatatcgtg acagacggct
     4621 gattctgact gggccctgac aattatcatt cggatcggta cgaatttaaa ggtcggatgg
     4681 tgatttctcg gtgggttcaa tttattgttc ggtttttgat taatttttgg tttggatttt
     4741 cttgttggtc gtggactgcc tgcagacatt gaattacggt tgcgattctg gcggcgtgct
     4801 gggcatatgc tgcgcatttg gagcttggtt cgggcaccat tatcgatgat ttgtcgcttt
     4861 gaacaacgcc gacttaattc atcatggcgg tttgattgat tggcgaatat ttaggcgatt
     4921 tgatcgaaac cgcgggcgcc ttgactgaac ccggcgatac gagtcgccga tgaccaacgg
     4981 actggtggtg ttccccctgc tggtctttaa cagctactcc aagcggcgtt ttcaccagct
     5041 tcaaaaagct gttgtcccct tggttccgga gcgcctcaag gtcatttggc aattttgatc
     5101 attctgggca gcttcgtgac cggcgatgtt ctacctatca ggcttgctgc aacagaaccc
     5161 gttgaatcaa agtcaaaccg gtattacgag ctttgtgatg gcatcagagg cattacttgt
     5221 gagattcaag gttcctatca aggatccttt accttcaatc cgacctgatt tcgatttcat
     5281 cggctaaact tggtgacctt tgacgacatt tcggtgatgg atcagcttga tgggcaggag
     5341 ctgattgcag caggtcgact tatcacaccc tggcggttgc tggctagctt tgattttgtt
     5401 gatgaacatc agtggacagt tgctggttat gcagttcggc tagttctgtt tgtgggtgtt
     5461 ggcacgttgc ttggcggcta ccttggcagt cttgtcatat ggtgaccccg ggaaggacag
     5521 ggagcttctt ttcgtggtcc cttttcggtg attggtgtcc tctttgttgc tgttgatggg
     5581 gtagggtaaa gtcttggttc catggctagc tgccttctgg ctgaagccac tgatacccac
     5641 tgacttgtgt tggagcgctg gactccattc tgacccgttc tcagacattg gtgaggtgtc
     5701 aaatgaactc ctcctttgtc cctgggttcc agtatttttc tgctttcgac tgagtgacga
     5761 tgtcttccag atgggatgga ctttgaaggt gtctttgaca catttcattt tgttatcaat
     5821 gattgcataa gtggaatggg gattagactg aaaatcaagt taaaaaagaa ctggaatgat
     5881 tctgacgaca tttgatgctg gcactcaagg aatgtcatgg ccatggatca ggatgaacta
     5941 caaatggact gctgttattt gcctgtcatt catcagagct gtttcagtgc ctaacaagct
     6001 tttgcactat ccatgcaggt tcttgtttaa agtctttatt ttaaatgcat ctgatgggcc
     6061 agttgagctt gcatcagtgt tctccgtttg atttttgact cccagctggt gactggatac
     6121 attgatggag gtttggaaac catctacata gcatctggaa taaactattc gagtccatta
     6181 gatgattcca agcctgtctt ccattacaga acatattcca gcaggcttca ttccaggctt
     6241 ccctttcgtg ttcttgtggt catttcgctt gtgctttatt gcatttctct tcaaagggta
     6301 cattttattc ggttgattct tctcctgctt cattccaaaa ccaagattca cataatccaa
     6361 ggttggtgtt gcagggacat gacaaaaata tccttgacaa aattgatgaa attgatagaa
     6421 ctgaaacagt gtgaactggt agactatgtg aacagaggaa gtcgattatg acttctgatc
     6481 aacagttctg aaggtgggct ggacttttca tttgttcttc gaaccttctg tcgtactgat
     6541 tggtttcgaa gtctgtcgct gttgagcctg aagtcccctt taccttcttt gaacggtgtt
     6601 tgttgatccc gttgctggta cggccgtgta tctacagaac ttgttgattg gtcctgttgc
     6661 tgggacctgg agtagttgct tgtgtgaatg tcactacttc gaactcgttg ctggctagtc
     6721 aaagaggtgt tgatccttgc tggagtcaat ttgggttcaa ggtccttgat ccagctcgct
     6781 cgctgcatcc tgtcccacac ggctgggaag cctacagagg agcgtgttca aggcttccat
     6841 tgtctttgac aactggatgg attcgggtta gattttagac ctctgcctcg acatgattgc
     6901 aaggacctag aaagctgatt cagctcgaag ttgaggaatc atccctgaat gggtgacagg
     6961 atcaaatcaa accacaactc tggaagaatt tactctggat gattcatggc tcaagctagc
     7021 atgttaagct gaaaagacca gcaaggctaa ctaggacaga acgttggcgc gatgaggatt
     7081 ctcatgggat gtgatggtgt ccacgatggt atggatggct cgttggtggc aacaatgggg
     7141 acaaaaagct ggggtttgtt cgttgattgg tggagatact agcagatgtt tctcaccatt
     7201 tttcggctgc gtatttctcg atgggtcatg ggagggataa tataacggtc ttggattttt
     7261 tggttgggtt accgtgttgc agtacaactt cctccttcaa attatttgga tgggtaatgc
     7321 ggaggaaaaa cccaaagcag atcacgcaat gactgcggtt ttggaaaatt gatctttggg
     7381 tttggcggca tctatccccg tctgtgcctg cagttgatat gtaaaaccgc ttcgagcttg
     7441 gtttttctcg cttgataaat cgattatttc cgttacttcg aacatttgat cccttcacag
     7501 aacatgaata tattatgacg gctgctccgc atttttgcga ccctgaactg taaccactat
     7561 tcggaattcg tgggtcattc gcgcttggcg ttcaaagtgg actcacggct acagcagcta
     7621 ttttgtattc tttgtgtccc accaaccttg gagcaatcgg attgctgacc tgttttctcg
     7681 accatgatta ttttgctcgc attttcacga gctatcggat gctgatacca gctttgcaaa
     7741 aaatagaatt ctgcaggaac atgaagacgt ggcttcgttg ccgttgtcgt tcagctgaat
     7801 gaactgcaca actcggttgt gtgatggaat tcgcggacac gtattcgttt tcggcaagat
     7861 gtgttggagt atttatgatc cgcttgtcga cgatgtcgtt tggctgatcg gtgttccgag
     7921 ctcatcgctg cctggtttgg ctctgctggt accttctcgg catttgtcgt cgcattgatt
     7981 ggacccgcga acattccgac ttgccggatc gatttctcga tgtcttgatc gacgcgtttg
     8041 gcgaatttga ttcgggacca gcatttgaat ttcccgatga atttctcctg gatgggcggg
     8101 aattcggttg gagtctttac atctgctgat gtta
//
