LOCUS       CP123605                2626 bp    DNA     circular BCT 26-APR-2023
DEFINITION  Enterobacter hormaechei strain RMCH-M19-N plasmid unnamed4, complete
            sequence.
ACCESSION   CP123605
VERSION     CP123605.1
DBLINK      BioProject: PRJNA956928
            BioSample: SAMN34233930
KEYWORDS    .
SOURCE      Enterobacter hormaechei
  ORGANISM  Enterobacter hormaechei
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Enterobacter; Enterobacter cloacae complex.
REFERENCE   1  (bases 1 to 2626)
  AUTHORS   Workman,S.D., Islam,S., Akter,S., Haque,F., Nasrin,T., Mohanta,M.K.
            and Yost,C.K.
  TITLE     Complete Genome Sequences of Multidrug Resistant Bacteria Isolated
            from Cockroaches Collected in a Bangladeshi Hospital
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 2626)
  AUTHORS   Workman,S.D., Mohanta,M.K. and Yost,C.K.
  TITLE     Direct Submission
  JOURNAL   Submitted (18-APR-2023) Biology, University of Regina, 3737 Wascana
            Parkway, Regina, SK S4S 0A2, Canada
COMMENT     ##Genome-Assembly-Data-START##
            Assembly Method                   :: Flye v. 2.9.1-b1780
            Genome Representation             :: Full
            Expected Final Version            :: Yes
            Genome Coverage                   :: 118x
            Sequencing Technology             :: Oxford Nanopore MinION
            ##Genome-Assembly-Data-END##
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 04/20/2023 09:20:06
            Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline
            (PGAP)
            Annotation Method :: Best-placed reference protein set; GeneMarkS-2+
            Annotation Software revision      :: 6.5
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,919
            CDSs (total)                      :: 4,801
            Genes (coding)                    :: 4,257
            CDSs (with protein)               :: 4,257
            Genes (RNA)                       :: 118
            rRNAs                             :: 9, 8, 8 (5S, 16S, 23S)
            complete rRNAs                    :: 9, 8, 8 (5S, 16S, 23S)
            tRNAs                             :: 88
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 544
            CDSs (without protein)            :: 544
            Pseudo Genes (ambiguous residues) :: 0 of 544
            Pseudo Genes (frameshifted)       :: 451 of 544
            Pseudo Genes (incomplete)         :: 81 of 544
            Pseudo Genes (internal stop)      :: 35 of 544
            Pseudo Genes (multiple problems)  :: 21 of 544
            Pseudo Genes (short protein)      :: 1 of 544
            ##Genome-Annotation-Data-END##
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
FEATURES             Location/Qualifiers
     source          1..2626
                     /organism="Enterobacter hormaechei"
                     /mol_type="genomic DNA"
                     /strain="RMCH-M19-N"
                     /isolation_source="Blattella germanica"
                     /db_xref="taxon:158836"
                     /plasmid="unnamed4"
                     /geo_loc_name="Bangladesh: Rajshahi"
                     /collection_date="2019-12-01/2020-03-17"
                     /collected_by="University of Rajshahi"
     gene            306..491
                     /locus_tag="QFB84_24580"
     CDS             306..491
                     /locus_tag="QFB84_24580"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000165998.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Rop family plasmid primer RNA-binding protein"
                     /protein_id="WGL89157.1"
                     /translation="MTRQESAALNMAKFIRAQTLLLLERLEQMDLDEAAGCCEHLHDQA
                     EALYAMLNAQIGEENA"
                     /name="Rop family plasmid primer RNA-binding protein"
     gene            complement(782..1000)
                     /locus_tag="QFB84_24585"
     CDS             complement(782..1000)
                     /locus_tag="QFB84_24585"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001046776.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="WGL89158.1"
                     /translation="MFGFSSGALMTLSDDERHLLVSVVSVWLRRAGGDAGAMMLDAYRQ
                     ILSETEPAVRTVMLEFLESVRIHYISS"
                     /name="hypothetical protein"
     gene            2206..2433
                     /locus_tag="QFB84_24590"
     CDS             2206..2433
                     /locus_tag="QFB84_24590"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010615788.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology. GO_component:
                     GO:0005886 - plasma membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YgdI/YgdR family lipoprotein"
                     /protein_id="WGL89156.1"
                     /translation="MKKIFVSVFAAAVALSALTGCTRTSYAIHTNDGRTIVSDGKPKES
                     DSGLLGYTDANGVKQQINKTDVKEVSEIPH"
                     /name="YgdI/YgdR family lipoprotein"
     Typing          complement(539..626)
                     /name="MOB_unknown"
                     /typing="oriT"
                     /tool="MOB-suite"
                     /identity="100.0"
                     /coverage="100.0"
                     /evalue="6.86e-39"
     Typing          1263..1791
                     /name="rep_cluster_2335"
                     /typing="replicon"
                     /tool="MOB-suite"
                     /identity="88.785"
                     /coverage="88.0"
                     /evalue="0.0"
ORIGIN
        1 aaatcccagc aaattgcatc accaaagcta aaagctttca gggttgtcta aaaagcacaa
       61 gacataagag gaagtgcggt attttataat caagccccca agaatttacc ataacatccg
      121 ttgcccgcac cgcctgagac gcgttcagcg cgttcctgac gaaaccatga caaaaaccac
      181 aacaaaccac cccggaaccc gtcagaaacg cgcctgttaa attttaacgg catgcatgac
      241 tatgcaccag aatgacgcca tgctcttttc acgcaaaaat catcaccaga cggggaaaat
      301 caccagtgac cagacaggaa tccgccgccc tcaatatggc caaatttatc cgcgcacaga
      361 cacttctcct ccttgagcgg ctcgagcaga tggatctgga tgaggctgcc ggctgctgtg
      421 agcacctgca cgatcaggcc gaagcgcttt acgccatgct gaacgcacag ataggcgagg
      481 aaaatgcgtg aaaatcggtg aacgggtgcg caattcagtg cgcggccgtg aggcgatggc
      541 ggggtgtcgg ggcgcagccc tgaccagggt atttgtgatg ccggcgcgtg cgcggtatta
      601 caaatgcaca tcctgtcccg gaacggacac cgggaaacag caaaaaaaac cgggcggcac
      661 gcccggaact caatcaagtt agattagatt actctcactc gtccataaca gcatcatgga
      721 acgacgacca ccgtccgtga cggccgcctc gtttaagtat ggacagaaat acagaaaatg
      781 ctcaggacga aatgtaatga atgcgaacgg attcaagaaa ttcgagcatg acagtcctta
      841 cggccggttc ggtttcagac aaaatctgcc ggtatgcatc cagcatcatg gctccggcat
      901 cccctccggc acgccgtagc cagaccgaaa caacggacac aagcaggtgt cgctcatcat
      961 cactaagagt catcagggct ccggaagaaa aaccaaacat ggcttaccta ctgttaacgg
     1021 caacgcagaa gaaaggttta cagggtagcg ggcagggatg aaaaaaaaaa ttgcagtcag
     1081 gccggaacgg ctgctgaacc ggtacaggcg ggttccgggc gcagcgccgg accagtcacg
     1141 gagcactagc ggagtgtata ctggcttaag atgtagcatg gcagtaacac atagcattaa
     1201 tgccacataa gacaggcgca gaaagtgaaa gaaaacgcgt caggagaaaa tgtgatacag
     1261 aatatattcc gcttcctcgc tcactgactc gctccgctcg gtcgttcggc tgcggcgagc
     1321 gggacgggct tacggatgga gcagaaattt cctgggggat gccaggaaga tacttaacga
     1381 agaaagcata aggccgcgcc aaagccgttt ttccataggc tccgcccccc tgacaagcat
     1441 cacagaatct gacgctcaaa tcagtggtgg cgaaacccga tgcggcttaa agataccagg
     1501 cgtttccccc tggtggctcc ctcgtgctcc cccgcattcc tgcctttcgg tttaccggtg
     1561 tcactccgct gttatggccg cggtttctca ttccacgcct gacactcagt tccgggaagg
     1621 cagttcgctc caggatggac tgtatgcacg aaccccccgt tcagtccgac cgctgcgcct
     1681 tatccggtaa ctatcaactt gagtccaacc cggaaagaca cgactaatcg ccattggcaa
     1741 cggccattgg caaacaggat gtgcgagaga tgtctcaaga gttcttgaag tggcggcctt
     1801 agtgaggcta cactgaaagg acaaatttgg tgacatgtct cgcacaagac tgttaccacg
     1861 gttaggggat ctgccaggat tacctaacct tcgaaaaacc acctgccagg gtggtttttt
     1921 cgtttacagg gcaagagatt acgcgcgaaa aaaaaggatc tcaagaagat cctttataaa
     1981 ttagacatcc aacctcacaa agaggaatac ttaaatcatc ttggtatatg tatcggccgg
     2041 attacatctc atataagcct cctccccgcc tgacaccaca ctttgaccat agcacctcgc
     2101 gcctaactcg atatacagcc caccatcaag cctcttttca cataaaaaat gacctatagt
     2161 tagatggtta gtgaccaaaa ctgatatgga taaaaggagc tggctttgaa aaagattttt
     2221 gtttcagtgt tcgcagcggc agttgcgctt tcagccctca ccggctgcac gcgcacaagc
     2281 tatgccatac acaccaatga cggtcgcact attgtcagcg acggcaaacc taaagaatca
     2341 gactcaggcc tgcttggcta tacagacgcg aatggtgtca aacagcagat caataaaacc
     2401 gacgttaaag aagtctccga aattccgcac tgagcatctt ctccgaaaaa ggccgctaat
     2461 gtggcctttt tctttacctg tggttctccg ccaaaatccc agcaaattgc atcaccaaag
     2521 ctaaaagctt tcagggttgt ctaaaaagca caagacataa gaggaagtgc ggtattttat
     2581 aatcaagccc ccaagaattt accataacat ccgttgcccg caccgc
//
