LOCUS       CP114148                2459 bp    DNA     circular BCT 06-JAN-2023
DEFINITION  Enterobacter hormaechei strain 2022CK-00493 plasmid unnamed4,
            complete sequence.
ACCESSION   CP114148
VERSION     CP114148.1
DBLINK      BioProject: PRJNA288601
            BioSample: SAMN31152634
KEYWORDS    .
SOURCE      Enterobacter hormaechei
  ORGANISM  Enterobacter hormaechei
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Enterobacter; Enterobacter cloacae complex.
REFERENCE   1  (bases 1 to 2459)
  AUTHORS   Hergert,J., Casey,R., Wagner,J., Young,E.L. and Oakeson,K.F.
  TITLE     2022CK-00493
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 2459)
  AUTHORS   Hergert,J., Casey,R., Wagner,J., Young,E.L. and Oakeson,K.F.
  TITLE     Direct Submission
  JOURNAL   Submitted (08-DEC-2022) Utah Public Health Laboratory, Utah Public
            Health Laboratory Infectious Disease submission group, 4431 S 2700
            W, Salt Lake City, UT 84129, USA
COMMENT     ##Genome-Assembly-Data-START##
            Assembly Method                   :: Unicycler v. 0.5.0
            Genome Representation             :: Full
            Expected Final Version            :: Yes
            Genome Coverage                   :: 43.0x
            Sequencing Technology :: Oxford Nanopore GridION; Illumina MiSeq
            ##Genome-Assembly-Data-END##
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/12/2022 10:41:47
            Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline
            (PGAP)
            Annotation Method :: Best-placed reference protein set; GeneMarkS-2+
            Annotation Software revision      :: 6.3
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,930
            CDSs (total)                      :: 4,815
            Genes (coding)                    :: 4,737
            CDSs (with protein)               :: 4,737
            Genes (RNA)                       :: 115
            rRNAs                             :: 9, 8, 8 (5S, 16S, 23S)
            complete rRNAs                    :: 9, 8, 8 (5S, 16S, 23S)
            tRNAs                             :: 85
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 78
            CDSs (without protein)            :: 78
            Pseudo Genes (ambiguous residues) :: 0 of 78
            Pseudo Genes (frameshifted)       :: 35 of 78
            Pseudo Genes (incomplete)         :: 44 of 78
            Pseudo Genes (internal stop)      :: 17 of 78
            Pseudo Genes (multiple problems)  :: 16 of 78
            ##Genome-Annotation-Data-END##
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
FEATURES             Location/Qualifiers
     source          1..2459
                     /organism="Enterobacter hormaechei"
                     /mol_type="genomic DNA"
                     /strain="2022CK-00493"
                     /isolation_source="blood"
                     /host="Homo sapiens"
                     /db_xref="taxon:158836"
                     /plasmid="unnamed4"
                     /geo_loc_name="USA"
                     /collection_date="2022-08-03"
     gene            complement(join(1446..2459,1..51))
                     /locus_tag="OEE80_24640"
     CDS             complement(join(1446..2459,1..51))
                     /locus_tag="OEE80_24640"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+. GO_process:
                     GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phage/plasmid replication protein, II/X family"
                     /protein_id="WBK49975.1"
                     /translation="MMIDWLTLRIPCDHSREIAGGAMVSYKDAWDFDAGADWCFTKPLA
                     VVGSHDANVRLKTSGFSNEGQSGTELHIDGNLVKFFQGHNLFGSCDIVGLVCDFMDHIC
                     SMESLGLHPTDFQKQAWRRGLFKLSRVDVTSMYRLNNRNDVLSWISSAEYSSTMAHRGR
                     GQLTKGSTLYFGKHSRRWSLKFYSKGQEVNCKGHRLPLELPSRDKLLAYAEPALRSELT
                     LRSMTLKETDLQLAANWPRNAEGITRIFEKYLAGLNMSDTRTIPAEQLAELPSGARLAY
                     QSWLEGHDLKNMLPHNTFYRHRRALLTLGVDIATVLPREKSNVVPLVRVLEAIPMGIPD
                     WAYGTPLYHQPVGF"
                     /name="phage/plasmid replication protein, II/X family"
     gene            complement(107..397)
                     /locus_tag="OEE80_24645"
     CDS             complement(107..397)
                     /locus_tag="OEE80_24645"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008054160.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="WBK49976.1"
                     /translation="MLSMTGQLLNVFENPRGVTKEGREYGGNYKIQVLGAVTLQNGETK
                     NDLVDLTCHDIAAFRPLLGQRISFPIGVMSMGKNQTVFFIPKGGMPEPVGG"
                     /name="hypothetical protein"
     gene            complement(397..846)
                     /locus_tag="OEE80_24650"
     CDS             complement(397..846)
                     /locus_tag="OEE80_24650"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="WBK49977.1"
                     /translation="MKTKSAGNKLATYLQSHSIIRDSSEGVSGKNISFSVSMPIERYYL
                     FKEISNRYNISMSQIVNVALHAFDSELLLSLDRESSFEIARAADDGITSDVGGEPVSYW
                     YSKVHQKAEQEEFARFCELNPDIPEEHLDDAYQSYFAQSAREEIF"
                     /name="hypothetical protein"
ORIGIN
        1 ctctctggag tggtcacagg ggatacgtaa cgtcagccaa tctatcatca tagttttagt
       61 cttccgtacc attttggtac aaaagtgcag tatcactata ctgcacttaa cccccaaccg
      121 gctccggcat cccacccttg ggaataaaga aaacagtctg attcttaccc atcgacataa
      181 ccccaatcgg gaaagaaatt cgctgtccca aaagcggcct gaacgccgca atatcgtgac
      241 aggttaagtc aacgaggtca ttttttgttt caccgttctg gagggtgaca gcccccagaa
      301 cctgaatttt ataattccca ccatactcac gaccctcttt agtcacgccg cggggatttt
      361 cgaagacgtt caaaagctgt ccggtcatag aaagcatcaa aaaatctcct ctctggcaga
      421 ctgtgcaaaa taagactgat aagcatcatc aaggtgctct tctggaatat cagggttcaa
      481 ctcgcagaaa cgcgcaaatt cttcctgctc tgctttctga tgaacctttg aataccagta
      541 agaaactggc tcaccgccaa catctgacgt aatcccatca tccgcagccc gggcaatttc
      601 aaaagatgac tctctatcaa gggaaagtag caattcagaa tcgaaagcat gcaaagctac
      661 attaacaatt tgagacatgg agatgttgta acggtttgat atttctttga aaaggtaata
      721 acgctcaata ggcatcgaaa cggaaaaaga aatattttta ccgctaactc cctctgaact
      781 gtcacgaata attgagtgac tctggagata cgtagccaat ttattacctg ctgatttagt
      841 tttcataaaa caccctacgt ttttggttaa ctgtgtaaat ttataccagt taacgacaaa
      901 catatcaacg cgagatacgg aatgccatag caaagttcag aacatcaccc cggataatca
      961 cggtaaagtt cgctgccttg cagggtgatg gcctcactac gtgaaccatc acccattgcc
     1021 agtttttttc ttacggagtg ccgtcaatca ctgaatcgga acccactggc tcaccagcgg
     1081 gaccccgcga ttcagcattt gacggaatca ggccacagag ttgcggatag aggcgctacg
     1141 gtgagatata agcaaatcaa gcatggtagg attagagtca ctcatggaga cccccttgaa
     1201 aggttttcgt gatagcagag gcaggaacgg cgaatttctg cctctgcgcc catcagatca
     1261 caatatccca catcaggcaa gcacccacgg catgtgtatg ctcctcgcag agctacgggg
     1321 catacacatg ccgtagccac ttgctgaaaa gagtcattaa gttccggtat gacgaaagca
     1381 aaaaaaatcc ccgttttagc ctggactggt acaggttaaa acagggattc gacaagcgga
     1441 gcgcgtcaga agccaacagg ctggtgatac aacggcgtac catacgccca atcaggaata
     1501 cccatcggga tagcctccag aacgcgaaca agaggaacca cgttcgattt ttcacgtgga
     1561 agcaccgtag caatatcaac acccaaagta agcagggcgc gacgatgacg atagaaggta
     1621 ttgtggggaa gcatgttttt caaatcatga ccctcaagcc atgactggta agccaagcga
     1681 gcgccagaag gcaactcggc aagctgttct gccggaatgg tgcgagtatc gctcatgttt
     1741 agccctgcca gatatttttc aaatatacgg gttataccct ccgcatttcg cggccagttc
     1801 gctgccaact ggagatcggt ttctttcaat gtcattgaac gcagcgttaa ttcagatctt
     1861 aatgcaggct ctgcatacgc gagaagttta tcacgggaag gtagttcaag cggcaaacga
     1921 tgccccttac agttaacttc ctgtcccttg gaatagaact tgagagacca ccggcgggaa
     1981 tgcttaccaa aatagagcgt tgaccctttg gtaagctgac cacgcccacg gtgcgccatc
     2041 gtcgaggaat attcagcgga tgaaatccag ctcagtacat cgttgcggtt attgagccga
     2101 tacatggacg tcacatcaac acgggatagc ttaaacagcc cccgacgcca tgcctgtttc
     2161 tgaaaatcag taggatgcag gccaagcgat tccatactgc agatgtgatc catgaaatca
     2221 caaacgagac ccacaatgtc acaactgcca aacaggttat gcccctgaaa gaacttcacc
     2281 agatttccgt cgatatgaag ctcagtaccg gactgacctt cgttgctgaa accagatgtt
     2341 tttaacctga cattggcatc atgtgacccc acaaccgcaa gcggttttgt gaagcaccaa
     2401 tccgctccag catcgaaatc ccaagcatcc ttataagaca ccatcgcccc gcctgcaat
//
