LOCUS       CP110743                2743 bp    DNA     linear   BCT 14-NOV-2022
DEFINITION  Klebsiella pneumoniae strain INF192 plasmid pINF192.2, complete
            sequence.
ACCESSION   CP110743
VERSION     CP110743.1
DBLINK      BioProject: PRJNA646837
            BioSample: SAMEA3357130
KEYWORDS    .
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Klebsiella/Raoultella group; Klebsiella.
REFERENCE   1  (bases 1 to 2743)
  AUTHORS   Foster-Nyarko,E., Cottingham,H., Wick,R., Judd,L.M., Lam,M.C.,
            Wyres,K.L., Tsang,K., David,S., Aanensen,D.M., Brisse,S. and
            Holt,K.E.
  TITLE     Nanopore-only assemblies for genomic surveillance of the global
            priority drug-resistant pathogen, Klebsiella pneumoniae
  JOURNAL   Unpublished
REFERENCE   2
  AUTHORS   Hawkey,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (16-OCT-2020) THE UNIVERSITY OF MELBOURNE, 30 Flemington
            Rd, Australia
REFERENCE   3  (bases 1 to 2743)
  AUTHORS   Foster-Nyarko,E., Cottingham,H., Judd,L.M., Hawkey,J., Wick,R. and
            Holt,K.E.
  TITLE     Direct Submission
  JOURNAL   Submitted (30-SEP-2022) Department of Infectious Diseases, Monash
            University, Level 2, The Burnet Institute, Melbourne, VIC 3004,
            Australia
COMMENT     ##Genome-Assembly-Data-START##
            Assembly Method                   :: Flye v. 2.8.1
            Genome Representation             :: Full
            Expected Final Version            :: Yes
            Genome Coverage                   :: 58x
            Sequencing Technology :: Illumina; Oxford Nanopore MinION
            ##Genome-Assembly-Data-END##
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 11/08/2022 12:05:53
            Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline
            (PGAP)
            Annotation Method :: Best-placed reference protein set; GeneMarkS-2+
            Annotation Software revision      :: 6.3
            Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA; repeat_region
            Genes (total)                     :: 5,588
            CDSs (total)                      :: 5,464
            Genes (coding)                    :: 5,330
            CDSs (with protein)               :: 5,330
            Genes (RNA)                       :: 124
            rRNAs                             :: 9, 8, 8 (5S, 16S, 23S)
            complete rRNAs                    :: 9, 8, 8 (5S, 16S, 23S)
            tRNAs                             :: 89
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 134
            CDSs (without protein)            :: 134
            Pseudo Genes (ambiguous residues) :: 0 of 134
            Pseudo Genes (frameshifted)       :: 56 of 134
            Pseudo Genes (incomplete)         :: 79 of 134
            Pseudo Genes (internal stop)      :: 33 of 134
            Pseudo Genes (multiple problems)  :: 29 of 134
            ##Genome-Annotation-Data-END##
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
FEATURES             Location/Qualifiers
     source          1..2743
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /strain="INF192"
                     /db_xref="taxon:573"
                     /plasmid="pINF192.2"
     gene            complement(1..2743)
                     /locus_tag="JMX05_02080"
                     /pseudo=""
     CDS             complement(1..2743)
                     /locus_tag="JMX05_02080"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005229687.1"
                     /note="incomplete; partial on complete genome; missing
                     N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo=""
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /name="AAA family ATPase"
ORIGIN
        1 tcgcgggctg accttccggc agggttttcc cctcgctcag tgccttctct atctcctttt
       61 cctgcttctg tgtgaattcc accacagaac tgcccggcgc ccaggcgcct tcttttctcg
      121 gcacctgctc cggcgtgacc tgctcgatgg tggtcagggc gcggtgcaca tcccgctcaa
      181 tcaggctgta gaccgccggt cgcagctcag gtacctggcg cacaatctct ttcatgatgg
      241 caacgtcggc ggcgctgcgc tgctgcgtca gcctgaacgg ctggcccgac gcgatgggcg
      301 gcagctggtc ggtatcccca ctggacaccg cccgtccacc gccggcggcg atgagggagt
      361 gggcttttgc catatcggcc agccccacca tcgagctctc gtcgagcagg aacagggtgt
      421 tgctgaaatc gggtgtctgc ccattgcgct gcagcagctg cgtgtcgtgg aggaacgacg
      481 ccgtcgtgcg cgcatccacg ccggcactct gcatttcccc gaccgcgcga tgcgtcggcg
      541 ccagaccgat gacgcgcggg cgggtctctt ccggcagcag actgatggca ctcatgactg
      601 cccggaactg ggtggttttc cccaccccgg catacccctg aaccaccgtg aactggtccg
      661 tgctctccag aatcatccgg gtcgccgccc gctgtccggc ggtcaggtcc gtcatcagac
      721 tgtccggcac gcggtccatc aggggggcca ccgcgtcttt accttccagc acccgggtca
      781 ggatgctttt ttcggcgtcc caggtctgac gggaaatcag caggtcattg ccgtagccgt
      841 gcgccaccgg tacattcagc aactgccccg acctgatttg tgcctggatg gtcgtgtcga
      901 tgtccgccat cgaaaccttc ccgcccccgg tttccattgc cgtcgccagc agctggggcc
      961 gggagaaggt caggtcctgg ctctcaagca gcgggatggc caggtgaatg gcctgttctg
     1021 ccggggtatg cagcccggcc ttctgctgcg caatggccgc atccagatcc gtctcgccgg
     1081 atcgggactt cagctgctct gagaccacgc tgaaggcggt atgccgcgac agcttctccg
     1141 tcgtgcgcgc cgcatcctgc gccgagtaca gccggaggtg acttccgctc tgtgccagct
     1201 ggttgagggt ggcgttatcc agctcacgct gcgtcaccga cgcaaagacc gttgccgtct
     1261 cgctaaccga cctgccggga ctttccaccc agccgtggcc gactttaata ccgtcaaaca
     1321 cgcccgcacc cacggccagg gtctgcgtgg ttttctgccc cggccgctgt accgtcagct
     1381 gcccgtcctc cactttcatc actgtgacgc tctccccgcc cttaaggcgt gtgtccggta
     1441 tcttcccgag caccgccaga cgttccccct ctgccaccgg cagtgtatct gcccggaaca
     1501 gcgtccactg gctgtcgacc gcggaaacct tcagatccag acggtcccct tcccggtctt
     1561 tcagggtcag catattgctg ctcgcggtca cccggtcaat gacaaagcga tcgtgcgtcc
     1621 gggtctccgg atcccagcgt tccatcacca tcccctcccg gtaataatcc cgcacgcccc
     1681 ggcttttgct gtccagccac accggcgtca gggctgtaat ggtcgtgtct ttctcaccca
     1741 gcaccccctc ctgtctgagg gagtctcgga tgaggccgtt gagtacgctc tgttcacgcg
     1801 tcccgctgat ttgggccacg ctttcctgtc cttcacgcac gctgacggca aactcctgtg
     1861 ccagccggct gtagcgtgct cctttatccg gttcactgat gatgtcggct gtggtctgat
     1921 ggcccccctg ccagcgatac gtattcacgc cgctgtcctt cagcaccgtc agcgcactgc
     1981 cggtcccgct gcgcttcccg ctgtcggaga gcaggacctg cacgttatgg cgcatcgcgc
     2041 catcgagcag ggaaatcgtt tccttcaggc tcagcttctc cgcctgatcc acgatgagtg
     2101 ttccgcccgg aataaacgcc gtcccgtcct gcagggcgga tttaccggtc accgtttccc
     2161 cggccagacg cacatcaccg gcgagaaaat cacgtgagcg gttatcggca gccaggatat
     2221 ggacgtcacg cccctgctcc cgggccatca gggttaactc ggccacccgc tcccgctggc
     2281 cggttgcacc gccctgaccg gaaacgatac ccattaccgg gcgatcctgc gccagcacac
     2341 tgacggcatc gctgaaaggg acctggcgca ccacagacgc atcaggcgtg acggagacat
     2401 gattctggcg ctgcacctcc tgactcaggg ctttgacggc gagttcatcg agaacgtgga
     2461 tgtttgaggt gaacaggcct ttctcgcgat cgagagggat aagctgctcc cgttcaatgg
     2521 cggcatcgat gccctttctc gccagctcaa acacaccgtc cttcgcctcc agctggccga
     2581 ccgtgcgtgc cagcaggtcg gcatacgtga actgcacctt gcggtcgctg agaccggcaa
     2641 tcgctttcgt caccacatcc gtgatatccg gaccgtcagt gttcaccggc gcggcaggtg
     2701 cacgggccag ctctgcggct cgcgcatcgg cggcctcacg gta
//
