LOCUS       CP066200                4073 bp    DNA     circular BCT 22-DEC-2020
DEFINITION  Escherichia coli strain Res13-Lact-PEB09-33 plasmid unnamed32,
            complete sequence.
ACCESSION   CP066200
VERSION     CP066200.1
DBLINK      BioProject: PRJNA662792
            BioSample: SAMN16304201
KEYWORDS    .
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 4073)
  AUTHORS   Poulin-Laprade,D., Brouard,J.-S., Gagnon,N., Turcotte,A.,
            Langlois,A., Matte,J.J., Carrillo,C.D., Zaheer,R., McAllister,T.,
            Topp,E. and Talbot,G.
  TITLE     Resistance determinants and their genetic context in bacteria from a
            longitudinal study of pigs reared under conventional and
            antibiotic-free husbandry practices
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4073)
  AUTHORS   Poulin-Laprade,D. and Brouard,J.-S.
  TITLE     Direct Submission
  JOURNAL   Submitted (14-DEC-2020) Sciences and Technology, Agriculture and
            Agri-Food Canada, 2000 College, Sherbrooke, Quebec J1M 0C8, Canada
COMMENT     ##Genome-Assembly-Data-START##
            Assembly Date          :: 23-NOV-2018
            Assembly Method        :: Unicycler v. 0.4.7
            Assembly Name          :: 3G3
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1.00x
            Sequencing Technology  :: Oxford Nanopore MinION and Illumina MiSeq
            ##Genome-Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..4073
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="Res13-Lact-PEB09-33"
                     /serotype="O82 (99.84):H31 (100.0)"
                     /isolation_source="feces"
                     /host="Sus scrofa domesticus"
                     /db_xref="taxon:562"
                     /plasmid="unnamed32"
                     /geo_loc_name="Canada: Quebec"
                     /collection_date="13-Mar-2017"
                     /collected_by="Agriculture and Agri-Food Canada"
     Typing          1746..1832
                     /name="MOBP"
                     /typing="oriT"
                     /tool="MOB-suite"
                     /identity="100.0"
                     /coverage="100.0"
                     /evalue="2.43e-38"
     Typing          2144..2242
                     /name="MOB_unknown"
                     /typing="oriT"
                     /tool="MOB-suite"
                     /identity="98.0"
                     /coverage="100.0"
                     /evalue="1.35e-41"
     Typing          2367..2622
                     /name="MOBF"
                     /typing="oriT"
                     /tool="MOB-suite"
                     /identity="93.411"
                     /coverage="89.0"
                     /evalue="2.67e-103"
     Typing          complement(1176..1735)
                     /name="rep_cluster_2350"
                     /typing="replicon"
                     /tool="MOB-suite"
                     /identity="95.204"
                     /coverage="100.0"
                     /evalue="0.0"
ORIGIN
        1 ttgtgaaatg cgatattgtt ggtatttcgt tttacaacac ccgttagctt tccgtcagca
       61 gttagtgcgt atagttgatc tagaattgtg ttcatctcat ctgttgtgct attgattatt
      121 cctttgccta gatgcaattc ggcctctttt tgagaacata ttcttttggc gtgataaaag
      181 gaaccccact tcgttaatga taggtgtacc tgtgggttta tcgtttttat cagtccttct
      241 attttgttta ttttttctct tattgtttct actgcagatt gcaaattttt agagtgtatt
      301 tttatccata tgcaatcatt atgcgataac ctatttctgt agtttctgat ctcattcagc
      361 tcgtttaaga aatcaattct ggctgtgcct tcatctttgc ttctatctaa tcccttcagt
      421 actctgtagg tgagcctggg ccataaggct cttgatgctt cagatcttga ttgtgtatga
      481 aaagcatcgc tcaaaaccgc ttgccatgtg taaaaatctg tgtgtgcaat gatgtcatca
      541 tgaggtgcaa ttattttggt atttgccatt gatgggtttt ttttcttgaa ttcattctca
      601 tatcttctta ttgctttgtt tatattatgt atgaagtcac cgtgtttgct ttttgatgtg
      661 tcggtgtata cattatccca ccatttttgg cctattagtt ttgtcgcttc tttatcaatc
      721 gagtttctca aagtaacttc gagttgttgc agtaatggat atatggcaga tgaggctttc
      781 tggctccata tatatatccc gtagcactcc ctatcagaca ggttattacc aaacgtgctt
      841 tttatagcat ttatttttcc ttgggatata aatggtatta catgagggta atgaattgta
      901 tttggcatat ccatctctat catacactta gtggtgattg gatgttgcca tacacgtatg
      961 gatagttgta gagtgttaaa cgaaaaaacc gccttggcgg gcggtttttc gaaggttcaa
     1021 agagttggcg ctctgtgaac caaggtaact ggcttggagg agcgcagtca ccaaaatctg
     1081 ttctttcagt ttagccttaa caggtgcata acttcaagac aaactcctct aaatcagtta
     1141 ccagtggctg ctgccagtgg cgttaaggcg tgccttaccg ggttggactc aagacgatag
     1201 ttaccggata aggcgcagcg gtcgggctga acggggggtt cgtgcacaca gcccagcttg
     1261 gagcgaacga cctacaccga actgagatac caacagcgtg agctatgaga aagcgccacg
     1321 cttcccgaag ggagaaaggc ggacaggtat ccggtaagcg gcagggtcgg aacaggagag
     1381 cgcacgaggg agcttccagg gggaaacgcc tggtatcttt atagtcctgt cgggtttcgc
     1441 cacctctgac ttgagcgtcg gtttttgtga tgctcgtcag gggggcggag cctatggaaa
     1501 aacgccagcg gcgcggcctt ttgtcctggc tttgccttgt tgctcacatg ttctttccgg
     1561 tcttatcccc tgattctgtg gataactgtg ttaccgtttt tgtgtgagtc agtaccgctc
     1621 gccgcagccg aacgaccgag cgtagcgagt cagtgagcga ggaagcggaa aagcgcctgg
     1681 acgtgcattt tctccttacg catctgtgcg gcatttcaca cccggcatgg ggcacttttc
     1741 atacaatccg cactgatgcc gcatggttaa gccagtatac actccgctat cgctacgtga
     1801 ctgggtcatg gctgcgcccc gacacccgct aaaaccccct gacgcgccct gacgggcttg
     1861 tctgctgccg aaaacgctcg cggacaagcc gtgagcgcct ccgtcagctt cgttatgttc
     1921 ctgcttcact ttcggtctca aagcgaacct ggatgctgtt ctggagttct tccgcgagtt
     1981 cgtgcagtcg ttcgcacatg gctgcctgtt cgtcggcatc cagagcatcc agtttttcaa
     2041 gcagtgtcag gctctggctt ttgataaatc gcgccatatt cagcgcagtt tgttgttgtt
     2101 tgttcacctt ccgttgttct ccgtcagttc cgggtgtcgg ggggaccctg agcagctggt
     2161 aattgtaaga cgttgcgggc gacggtatta caattgcaca tcctgtcctg tttttttagg
     2221 acgtatcatg gcacagcata tcaactgata aataatccct gtgcagtgca gccgctgttg
     2281 cataaaattt cgctctgcgt cgagtgtttc ttaatcaata attccgctga tactccggaa
     2341 aaacgcgagt ctgttctcat tcctgaaatg cccacacccc acgcaaaaac aagtttttgc
     2401 tgatttttct ttataaatag agagttatga aaaattagtt tctcttgctc tctttgcgat
     2461 atttaaaaaa gcggtgccgg cgcagctaca acaccgcgcc gacaccgctt tgtaggggtg
     2521 gtactgacta tttttataaa aaacatcatt ttatatcagg ggtgctgcta gcggcgcggt
     2581 gtgttttttt acaggacgcc cctgggggcg ctgccagggg tgtctgttca gatatgtagc
     2641 aatgagtcag ggattcacga actgaaaatg tccgaaaatg tgtctcatgg gcaccgtatg
     2701 cgcccaaacc gttcgtcatt cattttcatg catagctatg cagtgggctg aaaacgatcc
     2761 tgacgcattt tttcggtttt cactgggtaa aacatctctt tttgcggtat ctgcgtcaga
     2821 atcgcgttca gtgcgtttta gcggtgcgcg taatgcgacg ttatggtaaa tgcatttcct
     2881 cataggccga ttatttcata gatgtttgac tctctatctt cttttggttg cagatgtatc
     2941 aggcgactac agtacagtac atctaagccg aacctaatct ggtttggctg gacacctgta
     3001 tagcttctca gtgtttcatg tgtcacctta acagtattat ttgactgata acgaaggctt
     3061 ataattgtta aatatagttt taatgccaca aatggggcca tccccctgtt cgatatggtg
     3121 tttagttttt tcctgatagt atctacgggt acttttgccc acctatcatc atttggctgt
     3181 actgttaatt cataggagtt aacaaacatc tctctatcta tctttataag accatctttc
     3241 tcaagtttgg ctactccttt cactatcatg gggcggctta gtccagtcag tctttccatt
     3301 ccggtaaatg atactgaggc tgttcttgaa tggaaatcaa tcaagacgga tagagctaac
     3361 aagcatttca ttgatgcaat gccgccccct atctcatttg aacgaacatt gtttacaagc
     3421 catgagcttc gggcccacca gtttggaagc ctgccaaatt ttctaccgct catttttacc
     3481 ccattttcgg tcaaggagag atataaatag ctttattatc atatacatga aaaccattgc
     3541 acctaaagat acaacagaaa ccaaaacctc cggctttgcg gaagttagcg ttaccagcaa
     3601 attgttgagg gtttccaatt ggtcctccag tcgcatacta agttgttgtg ttttaacttt
     3661 atatacgctt attagaataa atctagataa agcaatattt ggtggttgct tgttttacaa
     3721 tataaaacat gatgttatct tgtttttatc gttttttaac tggtaaatgt aaatttgata
     3781 atgctggttt aatcggcgtt tttagttatt tttgttgtgt gttttttgat ctattggtaa
     3841 atggtggatg gtaagctttg gcgtgatcat gggaaatagt ttgctctttt tcctgatgat
     3901 gatgtatcat gtatggcagt gaagccttga gctttcgctt taatgcattg tgaaattttt
     3961 atagattcac aatgacatta aggccacgct ccaccgaaag gtgataatgg caagagattt
     4021 ggatgaggct cgacaggaaa ctgtcgggcc ttttctattt tgtgatctaa aac
//
