LOCUS       CP064289                2104 bp    DNA     linear   BCT 12-NOV-2020
DEFINITION  Enterococcus faecium strain Cairo plasmid pEFAEC_CAIRO_frag8.
ACCESSION   CP064289
VERSION     CP064289.1
DBLINK      BioProject: PRJNA672694
            BioSample: SAMN16574827
KEYWORDS    .
SOURCE      Enterococcus faecium
  ORGANISM  Enterococcus faecium
            Bacteria; Bacillota; Bacilli; Lactobacillales; Enterococcaceae;
            Enterococcus.
REFERENCE   1  (bases 1 to 2104)
  AUTHORS   Broddrick,J.T., Szubin,R., Norsigian,C.J., Monk,J.M., Palsson,B.O.
            and Parenteau,M.N.
  TITLE     High-quality genome-scale models from error-prone, long-read
            assemblies
  JOURNAL   Front Microbiol (2020) In press
REFERENCE   2  (bases 1 to 2104)
  AUTHORS   Broddrick,J.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (28-OCT-2020) Exobiology Branch, NASA, Bldg N239 Rm 315,
            Moffett Field, CA 94035, USA
COMMENT     ##Genome-Assembly-Data-START##
            Assembly Date          :: 20-APR-2019
            Assembly Method        :: Flye v. 2.6; Racon v. 1.4.7; Medaka v. 0.9
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 46x
            Sequencing Technology  :: Oxford Nanopore MinION
            ##Genome-Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..2104
                     /organism="Enterococcus faecium"
                     /mol_type="genomic DNA"
                     /strain="Cairo"
                     /isolation_source="clinical isolate"
                     /host="Homo sapiens"
                     /db_xref="taxon:1352"
                     /plasmid="pEFAEC_CAIRO_frag8"
                     /geo_loc_name="Egypt: Cairo"
                     /collection_date="06-Jul-2018"
ORIGIN
        1 caggtaatga ttttattcta cgttgtcggg ttatccagct tgcaaccgtt ccttgtgggt
       61 aggcatataa ctcacaaaat tgttctacag tgattcctaa atatcttgat aatgtaaaca
      121 ttgatcgggt gcgagtaaac aaatgtattg atagacatgg tgcgtaagcc tactttcttt
      181 tattattgcg tttgcaataa tagtttaaca cacgcattat tctagtatct actcctattt
      241 gtaaaaaaaa aaaaggattc atagagataa ctctatagaa tccgtaaaat accttatata
      301 aataacggga agatataaaa cctaaaatta tgataacctg ctgcagcttc tacatagaaa
      361 gagaagcgct caacaccaac ctcatttatc aaacgttggc cataacccca aatctcttct
      421 gatagctgat caaaggttat atactttagc tcatattgct ggataatgtt cattctaatc
      481 gactccattt attatcctgg taaaattcga tatgacgtat ttcgtcgtag tgaattttgt
      541 cttttccaac gtagatcccc agctcatcac tacctaagat cttgccaatg atatcttctg
      601 gatagtatcc ttcagcgttt cgttcttctt tttgaataga tactgatcta ttttttatga
      661 ctgcagcgtt caatacttcc gcaatctctt cagtcgtcat ttgttctttt gctaaatttt
      721 gactggttcg ttgttcattg tcggcatcaa tttcttcagt atgatcagat aaataaaacc
      781 ctgcccactt tcaaacgtcc acgatcattg taatcaatca tttttaagcc cccatttccg
      841 cccgcatgac caccaacaag tgtgcttcta gtaatgcttc tagcgccttc taacattgaa
      901 gaagcatgta caatcgacgt aaaaccatat ttttgccgaa tcttgtcaat aattttatct
      961 aaattttctt cgtcaatttg cttttgtgga tcactaaata aatccagctg aagcgaatcg
     1021 gtatacacaa gcttgctata ggttattcca acatgcctta cttcttgtcc ttcataatac
     1081 ttatcaaaca agaaaagaca ataattcttg caattccttt gtattatctg tgatagggat
     1141 cttcatctgg tgtgaaaacc ctggtctcgt ttctaagatc gacgttccaa tgtgtaaatg
     1201 gacacaacct gttttacagt tatgctgcct aatgcgtatc gctacttgtt ccgccatttc
     1261 ttttaccacc agctcgattt catttcttct agtataatct cgtggtaaca cttgtgaatt
     1321 tccatatgat ttttcctttg tcggttctgg tgggattgct atatctgttc gatcgatccc
     1381 attagcatgg aagtacagct gtaagccaat cacacctaat ctgttcttaa tcgtataagg
     1441 attccaatta gctaaatctt taatgctcat aatccccatc tgattgagtc tttttttcat
     1501 tcgagagcca ataccccaaa aagtccgtca tttcaggaat attccatact ttttcaggaa
     1561 cgttttggta cgtccattcc gcaacaaatc cttcattatg ctttgcttca ttgtctaagg
     1621 ctagtttagc caaaagggga ttatctccga cacctactgt agcaatcaat cctagctctt
     1681 ctttaatatt ctcctggatc atttgagcca gcttcttcct ccgttgactt cgtgttcctt
     1741 cagtcgtaaa aagattcagt gatcgggtca cttttaagat tgattcatcg atcgagtaaa
     1801 tcagtagatc ttcatcagcc acatatcttc tgaaaatatt atttacctgc atattacgct
     1861 taatatatag gttcatacgt ggtggaacaa cgtgtagtgt tttagggaaa tggttgtggt
     1921 agagtcacgt ggtctactca catttgtaat accataccgc tttttctttg cagctggtga
     1981 agaagctaaa atcaaccctg aaccagtatt atcagctcga ctcataacaa caaattctgt
     2041 cgttaatgga tctaaatttc tttctataca ttcgacactt gcgtaaaaac ttttcatatc
     2101 gatt
//
