LOCUS       CP064282                2217 bp    DNA     linear   BCT 12-NOV-2020
DEFINITION  Enterococcus faecium strain Cairo plasmid pEFAEC_CAIRO_frag1.
ACCESSION   CP064282
VERSION     CP064282.1
DBLINK      BioProject: PRJNA672694
            BioSample: SAMN16574827
KEYWORDS    .
SOURCE      Enterococcus faecium
  ORGANISM  Enterococcus faecium
            Bacteria; Bacillota; Bacilli; Lactobacillales; Enterococcaceae;
            Enterococcus.
REFERENCE   1  (bases 1 to 2217)
  AUTHORS   Broddrick,J.T., Szubin,R., Norsigian,C.J., Monk,J.M., Palsson,B.O.
            and Parenteau,M.N.
  TITLE     High-quality genome-scale models from error-prone, long-read
            assemblies
  JOURNAL   Front Microbiol (2020) In press
REFERENCE   2  (bases 1 to 2217)
  AUTHORS   Broddrick,J.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (28-OCT-2020) Exobiology Branch, NASA, Bldg N239 Rm 315,
            Moffett Field, CA 94035, USA
COMMENT     ##Genome-Assembly-Data-START##
            Assembly Date          :: 20-APR-2019
            Assembly Method        :: Flye v. 2.6; Racon v. 1.4.7; Medaka v. 0.9
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 46x
            Sequencing Technology  :: Oxford Nanopore MinION
            ##Genome-Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..2217
                     /organism="Enterococcus faecium"
                     /mol_type="genomic DNA"
                     /strain="Cairo"
                     /isolation_source="clinical isolate"
                     /host="Homo sapiens"
                     /db_xref="taxon:1352"
                     /plasmid="pEFAEC_CAIRO_frag1"
                     /geo_loc_name="Egypt: Cairo"
                     /collection_date="06-Jul-2018"
ORIGIN
        1 aaagagctaa cagtaccatt gttagctctt atgcagtaat gaaaaccaag cctttaaaaa
       61 aggagatgtt tcatcacaaa cacaaacaga aaaataaaaa aatcaaaaat ctaataatca
      121 taaattgcta ccgaagcacc ttttattata attaatcaaa tataaaatta caagtggttt
      181 ttttaattat tactaatact caaaataaaa acagggtatg ctactgaaaa ataaagaaac
      241 acctgatttt atgaacactt tgttttaaaa taagaactga aaaaatcact caaaataatt
      301 gagtgatttt cttagcgatt aaatgtttat agtttgtgcc gaataaaata aaaaattttt
      361 gccatttaaa aagaaaagga cagatggctt ctattgaaaa ctaactacgt gtcaaaaact
      421 taatagtttt tgacacatgg ttaaattcgc gatacaatag gatttgtagt gtttcataaa
      481 cttatgtcaa aaagttaagg ggattttcca tgattttaga aaataaattg ggtttaacga
      541 atcaggttga gttggccaag gctgaagaaa aactcagtaa gcaaaaagca aaagaattat
      601 atgattctgg aaaaataaat gaaatcgaag tcggcacgtt taaaggcttg tctgaaattc
      661 atgattttct cttttcagaa atttatgatt ttgcaggaaa aattcggaca gttaatattg
      721 caaaaggaaa ttttcgtttt gcgccggtca tgtacctaga acaatcttta aatcatattg
      781 atcagatgcc gcaaacttct ttcgaagaga ttattaagaa atacgtggaa atgaatatcg
      841 ctcacccttt tcgcgaagga aacgggcgca gtactagaat ttggctggat ctcattttaa
      901 aggaagaatt gcaaaaagtg gtcgattgga acttgatcga taaagcagac tatctttctg
      961 caatggagcg cagtccaata aatgacttgg aaatacgcta tctcatttcc aatgccctga
     1021 ctgataaaat tgacgatcgt gagttatata tgaaaggaat cgatgtcagc tacttctatg
     1081 aaggatactc tgagtatacg atagatgatt tgtaaaagca ggtgagttaa atgacaaaat
     1141 atggctatgc acgtgtctca accgcttctc aaagtacaaa ggaacagata caacagctac
     1201 ttgagaacgg tgttgagaag aagaatattt tttctgaaaa atttacaggt acgaaacgag
     1261 atcggccaaa gtttaatcag ctgttggctg gtctgaagcc tggagacgaa atcgttgtta
     1321 cgaaacttga tcgattcgcc cgtaatacaa gagaagcact agagatcatt gaacctttac
     1381 tcgatgataa cgtcacgatt aaggtattga atctagggac gatcgaaaat acatcgatgg
     1441 gtcgaatggt tacacgtacg ttgttgagtg tagctgaaat ggaacgtgat atgattgtag
     1501 aacgtactca ggaagggaaa ttatttgcga aaaagaataa tcctaatttt aaagagggac
     1561 gtccgaaagc aacaatcaca ccaaagaaga ggcatgcata tgaattgatt acttccggca
     1621 aatcgtataa agaagtggaa gccataacgg gtttcagtcg tagtacactt tttagaatta
     1681 agaaacaaat agaagcgagt gagtagaaga ttgataaaat taatataaaa atctctttta
     1741 aatcaaataa atcgttgttt atacgagcat tctaaggtca ggttcactca ttaagatgta
     1801 tcattggtcg aacgaagcgt cataccagct acgaatagac atatttttag ggaggaacga
     1861 agtaaatgaa agaacaacaa ttaggctaca ctctttgggg acgtccatta tacggattag
     1921 aacgaagaac ggctgtatcg attgactgtg cttgtggtga gttgattcaa ctcaatattc
     1981 aaacgaaaca atacaattgt aaaaattgtg ggaattgtta ccaattcatt gatcaagact
     2041 tccaattgct aaacgaaaaa aacaaatagg tttattatag tcagacaatt gtctggctat
     2101 ttttctattt agagaagatc ctcgttgcaa acacgaacgt atgtttgtat aatatgagag
     2161 aagaggggga gaactttatg cttgattact caaaagagcc agtcaatgac tactttc
//
