LOCUS       CP064280                2067 bp    DNA     circular BCT 12-NOV-2020
DEFINITION  Enterococcus faecium strain Cairo plasmid pEFAEC_CAIRO_1, complete
            sequence.
ACCESSION   CP064280
VERSION     CP064280.1
DBLINK      BioProject: PRJNA672694
            BioSample: SAMN16574827
KEYWORDS    .
SOURCE      Enterococcus faecium
  ORGANISM  Enterococcus faecium
            Bacteria; Bacillota; Bacilli; Lactobacillales; Enterococcaceae;
            Enterococcus.
REFERENCE   1  (bases 1 to 2067)
  AUTHORS   Broddrick,J.T., Szubin,R., Norsigian,C.J., Monk,J.M., Palsson,B.O.
            and Parenteau,M.N.
  TITLE     High-quality genome-scale models from error-prone, long-read
            assemblies
  JOURNAL   Front Microbiol (2020) In press
REFERENCE   2  (bases 1 to 2067)
  AUTHORS   Broddrick,J.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (28-OCT-2020) Exobiology Branch, NASA, Bldg N239 Rm 315,
            Moffett Field, CA 94035, USA
COMMENT     ##Genome-Assembly-Data-START##
            Assembly Date          :: 20-APR-2019
            Assembly Method        :: Flye v. 2.6; Racon v. 1.4.7; Medaka v. 0.9
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 46x
            Sequencing Technology  :: Oxford Nanopore MinION
            ##Genome-Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..2067
                     /organism="Enterococcus faecium"
                     /mol_type="genomic DNA"
                     /strain="Cairo"
                     /isolation_source="clinical isolate"
                     /host="Homo sapiens"
                     /db_xref="taxon:1352"
                     /plasmid="pEFAEC_CAIRO_1"
                     /geo_loc_name="Egypt: Cairo"
                     /collection_date="06-Jul-2018"
     Typing          2..918
                     /name="rep_cluster_935"
                     /typing="replicon"
                     /tool="MOB-suite"
                     /identity="91.513"
                     /coverage="99.0"
                     /evalue="0.0"
ORIGIN
        1 aaccgtattt ctaacaggcg gttaagtgtg caaggtacga ccacccccct aaaattaaat
       61 tggtcgattg atcgaattac aattgtcgga aaactgaatg ataccatagc ttattggacg
      121 aaaaatggag ttgtttttgt cgatttcgag caattaatgc gtttgaacga aaatcaggga
      181 tatttgaaat cagttgggat aaacggctgg caattattcg atcaatatgg agaagatatt
      241 gcgtatatcg aaatacttaa atttcatgaa ggaaaaggtc gtattgattt taatccgaat
      301 aagataggcc agtttttagc tagttccatg aaaggattca ttcatgacct atttttagat
      361 ccgcattttt cccgggcgga tattgcctgc gatattgtag atgtgccgga tgactttatt
      421 actcagtatc gtattgtaga cccgatttct tttaagccaa tctacggccg ttctggcaag
      481 ctagaaacag cgtactgggg cagtcgtgcc agtgagcgcc aagtgcgact gtacaacaaa
      541 aagctagagc aggaacgaaa aaaagtaatc gtgccaaaag aaatcgatac gtggtggcgg
      601 ttagaaatgc agctaagacg tggcaaagca acggattggc atgcgatggt tcaggaaagc
      661 ttagatagtt ttgcaagccc gcattttttg ccgattgata taaaacctat tgataaaata
      721 gttattgatg gtttgatagc tgagccttct aattggtcga taattgctag acatacaaaa
      781 tataaatatc ggaatttgct gaagcaagaa agtcaaaatg atgagttaac gaatcattta
      841 cgagagacgt ttaaggaatc tgcagacgaa ttaaaaaaag aattggatac gtggcttttg
      901 gggttggatg tgacagagaa gtgataccga ataagaaaag tcagatgagt gagagtggat
      961 ttgcgtcaat gtttagtgac gtaaattcac gataagcgaa tattttgcat gaagcaaaat
     1021 aaagcgtaaa aggagttgag agcgtgacac gctttcggct ccttttttcg ttgtcacttg
     1081 tgacagcgaa taccctcgga gagcatttgg aattgtgaca gccatgtcac aattaggaaa
     1141 atttttactc tttgtcaaag agtaacagaa aggtttacac tctttttatt agcgacagcg
     1201 tgaaggaggg gttcacctta gggtttagta tttcgttcaa aaagggaaca aagaatacaa
     1261 gcatttctca taataatcgt gagttaactg atagccaaaa aatcaatggt ttgtctggta
     1321 gaaaataatt agcagattta caagtgggaa ataaaaagct gaaagaagaa aattgcattt
     1381 caaactacat tttctacaat agctctaaaa tggcatattt tgcgttctga gcggttttag
     1441 cgtttatttc gtttagttat cggcacaatc gttaaaacac gttagaggag cgaaaatgga
     1501 gcctgtaagg cgactggtag cggaacgatc gtgttagatt gtgaaaaccg atagctgaat
     1561 gaaataaaca gcgggtgcgc cctttccatt tcggcaggag gaggctcaag gggttcgggg
     1621 aatgaaattc cctgaggtct tttttatttt ttaggaggag tgctataatc aaagaaaacg
     1681 agaaaaaaga gcaaaataaa agccgagcag tgcgctaaca ctctcgacta tttacggaaa
     1741 ctacttcacc tagctccgta actcaggttc attatacgaa tatttttagg tttcttcaag
     1801 ctagagattt ttggatatga atttttaggg ttacgtgaac tctggaaatt ctttccaaaa
     1861 gtctcttttt tcgtttggag gacgaaaatg gcaaatgaaa atcagttgag tgaaattcaa
     1921 tcaaaaattg aaggtcgagg ggcagaaaaa agaacaacga taaatcagct cgaaaaactt
     1981 aaccgtattt ctaacaggcg gttaagtgtg caaggtacga ccacccccct aaaattaaat
     2041 tggtcgattg atcgaattac aattgtc
//
