LOCUS       CP056526                4074 bp    DNA     circular BCT 16-MAY-2022
DEFINITION  Escherichia coli strain RHBSTW-00440 plasmid pRHBSTW-00440_3,
            complete sequence.
ACCESSION   CP056526
VERSION     CP056526.1
DBLINK      BioProject: PRJNA605147
            BioSample: SAMN15148613
KEYWORDS    .
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 4074)
  AUTHORS   AbuOun,M., Jones,H., Stubberfield,E., Gilson,D., Shaw,L.P.,
            Hubbard,A.T.M., Chau,K.K., Sebra,R., Peto,T.E.A., Crook,D.W.,
            Read,D.S., Gweon,H.S., Walker,A.S., Stoesser,N., Smith,R.P.,
            Anjum,M.F. and On Behalf Of The Rehab,Consortium.
  TITLE     A genomic epidemiological study shows that prevalence of
            antimicrobial resistance in Enterobacterales is associated with the
            livestock host, as well as antimicrobial usage
  JOURNAL   Microb Genom 7 (10) (2021)
   PUBMED   34609275
REFERENCE   2  (bases 1 to 4074)
  AUTHORS   Shaw,L.P.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JUN-2020) Nuffield Department of Medicine, University
            of Oxford, John Radcliffe Hospital, Oxford OX3 9DU, United Kingdom
COMMENT     ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. v0.4.7
            Assembly Name          :: WTP5 T2-00440
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 103.370037252455x
            Sequencing Technology  :: Hybrid: Illumina and OXFORD_NANOPORE
            ##Genome-Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..4074
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="RHBSTW-00440"
                     /isolation_source="Wastewater influent sample"
                     /db_xref="taxon:562"
                     /plasmid="pRHBSTW-00440_3"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2017"
     Typing          complement(2417..2593)
                     /name="MOBQ"
                     /typing="oriT"
                     /tool="MOB-suite"
                     /identity="100.0"
                     /coverage="100.0"
                     /evalue="5.61e-88"
     Typing          2594..2952
                     /name="MOBQ"
                     /typing="oriT"
                     /tool="MOB-suite"
                     /identity="98.056"
                     /coverage="100.0"
                     /evalue="3.94e-177"
     Typing          complement(938..1629)
                     /name="rep_cluster_1778"
                     /typing="replicon"
                     /tool="MOB-suite"
                     /identity="95.965"
                     /coverage="100.0"
                     /evalue="0.0"
     Typing          3..676
                     /name="MOBQ"
                     /typing="relaxase"
                     /tool="MOB-suite"
                     /identity="99.111"
                     /coverage="99.0"
                     /evalue="7.82e-148"
     Typing          2508..4072
                     /name="MOBQ"
                     /typing="relaxase"
                     /tool="MOB-suite"
                     /identity="99.425"
                     /coverage="99.0"
                     /evalue="0.0"
ORIGIN
        1 gagtggttat atctgtgacc gaagcgaaat cggtcaacat ccaccactgc aacgtgttta
       61 ttcctctgcg acctttgagc aacttctgac gcaggtttgc cagacatggc cgcaatatac
      121 ccgcaatctc cgccagccga agacatggcc ggagtctttc tgtcttggag aagaccgcca
      181 gccagccatg ccatcactgg cagcaaggaa ggtggatttt acgcagggac gtctgccacc
      241 gacgctgatg ccggtaatga gttctgtcga ccgggaaacc cgccagcttc agcttttgct
      301 ggtcatgggc gtggatgact ctctgggcgg tgttgtccgg cttaatggta cgctgtatcc
      361 cgcgtttgcc gttccctcag ccgataacag ccagctggtc atcagtgcac tgaccgataa
      421 ggggttacgg tatgcagggt atggtgttgc cgtaaatcac gatgcagaca gccacatatc
      481 acctgcgccg gaacttatgg agtttcatct gaaaacccgt gaggcaccgc tttttgctgc
      541 cgtcaacaca ccagaaaaac agccggatca tctgttccgc tcgctgggtt tcaatcgtac
      601 ctgggacgaa tggcggcgcg aggaagatgc aagaacacac accaccgaga ggagacatga
      661 tcgcggttgg tcacagtgaa tgtgaacaat attttgtttt gtttaacatc gtgttatgtt
      721 cgtcgatgtt cttcgatgtt catcgacagg gatgaatgca agaagcacac tcacataatg
      781 caagcatagt tttgtttttc cgcccccaaa aattgggggt tcttttttcg ctgcatcaga
      841 gcgtttttga cgcaattttt cacttcaata gtaccttcgc actactaaca caaaaaaaac
      901 gcagcaggga gcgttttagg tgccttaaaa tcgattttag atcgtcatct tgatctgttt
      961 gtcttccttg aagcgaaaat gcagggctac aaccgtgcgc ccctttttga tcgtctcaac
     1021 cgttacagcc aggtcgcttt ttttgttcag ttcgtcaaca cagggtttta ttagtatttt
     1081 atttaagtct ctgaattgtt tgtatttatt ttcaatccct aacattgaac gaaagtcatt
     1141 aagagcaata attctctctc ccgtactgcg gaattgctgg aggaactcgt atattcttat
     1201 actgtaacta cttgataaac ctgatatgtt ttttataaca acgcgcgtga attgcccctt
     1261 cagttgcgtc agataaggca ttaccgcgtc agaaaaggtt attcgagcct tggcctcacc
     1321 tttagcgtac tgtgcccgat actggatcca gcggaactcc tcacgcttct cgtcattctt
     1381 gagaatgatc gacctgtccc ataaacgatc gatcgcttcc tgtaactgaa cctcggcatt
     1441 tttccgcccc atgtcaggga atgaatcaaa atattccgca gcggtaatgg tcattgtctt
     1501 ttgcaattca gcatcagcac cagatttcaa tcgactgata cacagcaaca gaaaacgttg
     1561 ttcctgtagg gtcaacttgt agctggcctc aaccaaagca ttcgacttgt aggcaatcaa
     1621 gtccgacata caaagatccc gttcaaatgt ggtgatgctt taatgtgccc cacaaataag
     1681 aaatgtggaa tgtttttttt tatatcctca catttctgtg aataacacct taaattcctc
     1741 cacctttacc ttaaattcct ccacctaaac accttaaatt cctccacctt taccttaaat
     1801 tcctccacat ataccactat aacatattga ttttattaat gaatttcacc cctaaaacaa
     1861 gtattaaaaa caagatctta aaaacaagat ctaaaaactt aacggcgagc ctgtggataa
     1921 cttggggtgc tgaaaacaaa aaaccaataa aaacaatgtg ttgcaagaaa gcagaattgc
     1981 aagttccgaa tactcccctt ccaaccctgt ggaaatccag tattcatgcg agttcagcgc
     2041 atatcacctg ccgaaaaacc gtgcgtatgt gctcaacctg gcgacggatt cacttccgct
     2101 tcctcgccca ctcgctcgct aacgctcggt cgctggggct gcggcgagcg gacgatacaa
     2161 tcactgtcct ggcagcgcct ccagctcgtt aatcagcggc agtatgcgcg tcacatcagc
     2221 ctgtcgtgtc acctctgcct tcaggaactg gagtaaccag gcacgcaact gcacctcctc
     2281 cggctttctg acctttgcca gcaatgctgc acccacaaca accttctgcg ctgtgtccag
     2341 gctccggctc ttcgccttca ggcgctgtaa tctcgcctca gcatcagcaa tcttctgttc
     2401 gagcgttctg ctcatgatgt aactccgtgc gcgatgaaaa atcgcatttt agcgcgtcac
     2461 tggtagttta aaaactgagc tggcataatg cacggcaaat cacgaagtgc gcacttatac
     2521 aatctccact ccgtttcgat tgtgtgcgcc ctgcggggct gaaagaaaac tacaaaaagg
     2581 cattacggca gaaatggcga tttatcatct cagcatgaaa attatctcca gaagcagcgg
     2641 ctacagcgcc gtagcttccg ctgcctatcg ttccggttca ctaatgcttg atgagcgtac
     2701 cggactgact cacgactaca cccgcaaaag cggtgtggct gaagctgtga ttctgacccc
     2761 cgcgacagcc cctgcctggt gtacgaaccg tgccgaactc tggaatgccg ttgagaaggc
     2821 cgaacgccgg aagaactcac aacttgcgcg ggaaattgaa ctcgctatcc cccgtgaact
     2881 gccgcaggat gccgcacggg aaaccgttct cgcctttgtc agagaaaact ttgtcagtca
     2941 gggcatgatt gctgatgtgg cgttccatca catggataaa acaaatcccc atgcgcacat
     3001 catgctgacc acgagggctg tcggacctgc tgggttcggc ggaaaggtca gggactggaa
     3061 cgaccggaca catgccgaga cgtggcgtgc atcatgggct gaccatgcaa acagagcact
     3121 ggcgaacgcc ggttatcagg aagagataga ccatcgttca tacgagcgac aggggcttga
     3181 gaaaacgcct ggtattcacc tcggaaagtc tgcctgtgcg atggaaacac gcggtatcga
     3241 aacagaacgc ggcgaacaga atcgtctgat taacaggctt aacctggaaa tacagatttc
     3301 ccgcactgaa ctcaggaaca gcgggctgac agagcctgcc cgccgtgtgg ctgaccttct
     3361 gaatatcgtg cttcctgaca acgcaacttc gtacacacta cgtgacatca tcgaagcgtt
     3421 gccgaaggac agtaatgcgg catggaaact caccagtaat gccatgtcga tgatggcaga
     3481 tatgcaggcg acgcgcagac gctgggaaga gctgaacacc gaacgaaagg aagcgatgag
     3541 ccatgctgcc agcctgaaaa aatcatcgcc gttttcgtcc ggtttttccc gtattcccct
     3601 gatgcaatgg gcggcaccgg aataccgtag cgaacaggga aaaatccagt cgctgagcca
     3661 gcaaatggaa aaattgcgac agcattaccg gaaggtggag aaacaggaca ttcccgcgag
     3721 tcagacggca tttgaaaaac agtggcagca gtggggggca tccggccttg cagctctcag
     3781 agtccagttg cttaaacgtg aagaggaatt gcgccggaag gagcaggagg atacagaacg
     3841 tagtcgcgcg gagcgacgag cggaacagct caggaaaaat gacaatgccg ttatggattc
     3901 aggggtactg agcgcagtcg ttacggggta tggcgaggcc cccatgcctg gtaacgggga
     3961 aatgacctgt taccttctgc ttcacaaccg gaacggagaa tacacgctct gggggaacga
     4021 gctggagaaa taccgcacca gaatctttga gcgtgttgat ttaatgcgtg acag
//
