LOCUS       CP052430                1203 bp    DNA     circular BCT 04-MAY-2020
DEFINITION  Klebsiella pneumoniae strain C16KP0129 plasmid pC16KP0129-3,
            complete sequence.
ACCESSION   CP052430
VERSION     CP052430.1
DBLINK      BioProject: PRJNA625837
            BioSample: SAMN14609892
KEYWORDS    .
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Klebsiella/Raoultella group; Klebsiella.
REFERENCE   1  (bases 1 to 1203)
  AUTHORS   Yoon,E.-J., Gwon,B., Liu,C., Kim,D., Won,D., Park,S.G., Choi,J.R.
            and Jeong,S.H.
  TITLE     Built-in CTX-M extended-spectrum beta-lactamase gene in Klebsiella
            pneumoniae ensuring stable propagation of the multidrug-resistant
            pathogen in clinical settings
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 1203)
  AUTHORS   Yoon,E.-J., Gwon,B., Liu,C., Kim,D., Won,D., Park,S.G., Choi,J.R.
            and Jeong,S.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (24-APR-2020) Research Institute of Bacterial Resistance,
            Yonsei University College of Medicine, 211, Eonjuro, Gangnam-Gu,
            Seoul 06273, Korea, Republic of
COMMENT     ##Genome-Assembly-Data-START##
            Assembly Method                   :: SPAdes v. 3.13.1
            Genome Representation             :: Full
            Expected Final Version            :: Yes
            Genome Coverage                   :: 100x
            Sequencing Technology             :: Oxford Nanopore and Illumina
            ##Genome-Assembly-Data-END##
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 04/27/2020 20:38:34
            Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline
            (PGAP)
            Annotation Method :: Best-placed reference protein set; GeneMarkS-2+
            Annotation Software revision      :: 4.11
            Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA; repeat_region
            Genes (total)                     :: 5,290
            CDSs (total)                      :: 5,168
            Genes (coding)                    :: 5,049
            CDSs (with protein)               :: 5,049
            Genes (RNA)                       :: 122
            rRNAs                             :: 9, 8, 8 (5S, 16S, 23S)
            complete rRNAs                    :: 9, 8, 8 (5S, 16S, 23S)
            tRNAs                             :: 84
            ncRNAs                            :: 13
            Pseudo Genes (total)              :: 119
            CDSs (without protein)            :: 119
            Pseudo Genes (ambiguous residues) :: 0 of 119
            Pseudo Genes (frameshifted)       :: 86 of 119
            Pseudo Genes (incomplete)         :: 23 of 119
            Pseudo Genes (internal stop)      :: 17 of 119
            Pseudo Genes (multiple problems)  :: 6 of 119
            ##Genome-Annotation-Data-END##
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
FEATURES             Location/Qualifiers
     source          1..1203
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /strain="C16KP0129"
                     /isolation_source="blood"
                     /host="Homo sapiens"
                     /db_xref="taxon:573"
                     /plasmid="pC16KP0129-3"
                     /geo_loc_name="South Korea: Gangwon"
                     /lat_lon="37.82 N 128.16 E"
                     /collection_date="2016"
                     /collected_by="Kor-GLASS"
ORIGIN
        1 cgaatcgctg tcggagtcag agtcgctgtc agaatcggag tcgctgtcgg aatctgcatc
       61 agcatccgac tcaccgatat cacttcctgc cacgatatta atcgtcagcg tagccgtcgc
      121 cgtatcacca tccgcatcca ctatcgtgta ggtaaagata tcggcctggc caacagcatc
      181 cgcatcgcca gtcgccttgt aggtatagct gccgtccgca tggatcgtca gctgaccgta
      241 aagaccattt atcacaacac ctgcagccgt cacatcaagc ggcgtggtct gcacgctgga
      301 ggcgattttg cttaccgtaa tgccatcacc ggtgtctgct acatcacccc ctgcatccgc
      361 aaccagcaca ttgccggcaa ttgccgtcga ggtgtactgc gtagaatccg tgattgtcgc
      421 ctgggcaacc gacagcagat ttgctgacgc cagttcatca accactgcgg ccagaccgcc
      481 ggaagcctgc ggtgaagaaa ccaccaccgc gtagttccct gccggcaggt cgctgaaggt
      541 cgcgctgccg gagtaaacca gattgagcag cgccagagac ggcgtcaggc tcacggcatc
      601 cggaataatc tgcaccacct caccggtgtc ggtattcact atcgacagat cggcggtaat
      661 ggatgaagcg ccgcccacca gttgccccac cagtgccagt actgactgca gactcagcaa
      721 cgttgaacca gtgacagcta tcgtcacatc ctcagttgtt ccttcgctaa ccgagaactt
      781 cgtggagttc gccgccagca gggagacatc caccgtattg agtaaggaga caccaagcag
      841 ctggcttgcg gttccggtca cgttgttaag gttgccctct acggtatcga tagccgccgt
      901 atgggtatca ttatttgcct gcggttcggt atccgaatcg gaatcggaat cagagtccga
      961 gtcgctgtcg gagtcggagt cgctgtcaga gtccgaatca ctgtcggaat cggaatcgct
     1021 gtcagagtcc gaatcgctgt cagagtcaga gtcgctgtca gaatccgagt cgctgtcgga
     1081 gtccgaatcg ctgtccgagt cagagtcgct gtcagaatcc gaatcgctgt cagagtcgga
     1141 atcactgtca gagtccgaat cactgtcaga atcggagtca ctgtcagagt cgctgtcaga
     1201 atc
//
