LOCUS       CP050839                4919 bp    DNA     circular BCT 08-APR-2020
DEFINITION  Klebsiella pneumoniae strain Bckp021 plasmid pBckp021-5, complete
            sequence.
ACCESSION   CP050839
VERSION     CP050839.1
DBLINK      BioProject: PRJNA616339
            BioSample: SAMN14487838
KEYWORDS    .
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Klebsiella/Raoultella group; Klebsiella.
REFERENCE   1  (bases 1 to 4919)
  AUTHORS   Ma,J., Yu,Y. and Yao,H.
  TITLE     Keeping alert to hypervirulent Klebsiella pneumoniae strains in
            genotype K1, K2, K3, K5, K54 and K57 isolated from bovine mastitis
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4919)
  AUTHORS   Ma,J., Yu,Y. and Yao,H.
  TITLE     Direct Submission
  JOURNAL   Submitted (30-MAR-2020) Department of Veterinary microbiology,
            Nanjing Agricultural University, No. 1 Weigang, Nanjing, Jiangsu
            210095, China
COMMENT     ##Genome-Assembly-Data-START##
            Assembly Method                   :: CANU v. v1.7
            Assembly Name                     :: Bckp021
            Genome Representation             :: Full
            Expected Final Version            :: Yes
            Genome Coverage                   :: 171.85x
            Sequencing Technology             :: Complete Genomics
            ##Genome-Assembly-Data-END##
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 04/01/2020 12:51:44
            Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline
            (PGAP)
            Annotation Method :: Best-placed reference protein set; GeneMarkS-2+
            Annotation Software revision      :: 4.11
            Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA; repeat_region
            Genes (total)                     :: 6,008
            CDSs (total)                      :: 5,887
            Genes (coding)                    :: 5,707
            CDSs (with protein)               :: 5,707
            Genes (RNA)                       :: 121
            rRNAs                             :: 8, 7, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 7, 7 (5S, 16S, 23S)
            tRNAs                             :: 88
            ncRNAs                            :: 11
            Pseudo Genes (total)              :: 180
            CDSs (without protein)            :: 180
            Pseudo Genes (ambiguous residues) :: 0 of 180
            Pseudo Genes (frameshifted)       :: 79 of 180
            Pseudo Genes (incomplete)         :: 111 of 180
            Pseudo Genes (internal stop)      :: 34 of 180
            Pseudo Genes (multiple problems)  :: 37 of 180
            ##Genome-Annotation-Data-END##
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
FEATURES             Location/Qualifiers
     source          1..4919
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /strain="Bckp021"
                     /isolation_source="milk"
                     /db_xref="taxon:573"
                     /plasmid="pBckp021-5"
                     /geo_loc_name="China: Jiangxi"
                     /lat_lon="30.7 N 118.4 E"
                     /collection_date="Jun-2018"
                     /collected_by="Nanjing Agricultural University"
     gene            1..1446
                     /locus_tag="HC680_30020"
                     /pseudo=""
     CDS             1..1446
                     /locus_tag="HC680_30020"
                     /inference="COORDINATES: protein motif:HMM:NF013603.1"
                     /note="incomplete; partial on complete genome; missing
                     N-terminus; Derived by automated computational analysis
                     using gene prediction method: Protein Homology."
                     /pseudo=""
                     /codon_start=1
                     /transl_table=11
                     /product="protein rep"
                     /name="protein rep"
     gene            1446..1592
                     /locus_tag="HC680_30025"
     CDS             1446..1592
                     /locus_tag="HC680_30025"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="QIV32010.1"
                     /translation="MKKKQKPKKRNRNRKSKFFKMLLASVREAVEIKKGNIEPARITIL
                     KKE"
                     /name="hypothetical protein"
     gene            complement(1617..2915)
                     /locus_tag="HC680_30030"
     CDS             complement(1617..2915)
                     /locus_tag="HC680_30030"
                     /inference="COORDINATES: protein motif:HMM:NF015354.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MobA/MobL family protein"
                     /protein_id="QIV32011.1"
                     /translation="MAIYYFDVSNVSRSSGKKSASSVAASAYQNRARYTDERTGTTYDY
                     TKKGGLYYSGILAPENAPESLTASPLTLWNTIEGIEKRKDARLAKDFKISLPIELSPEQ
                     NKALILDFAKQAFVSKGMIVDLAIHDIDTQPHSHIKTTTRELTPEGFGGKVREWDKKET
                     TLYWRELWAKVANEHLLKAGHDITISHLTLKEQMKEALEEMDKTTDLEEKIKLASKAIE
                     LDRPAMKTISKKDWGDPKFQAIRKQEQEAKKQILKKAKNFRIKNTRELREIQKELDKKF
                     RPSKIYKSISEAIRNLNNKITDSKINNILNDKLDKLTETIKSVPDKIKHSIEERRIKKE
                     NKEERRRNKEEERIFRETHKMDEFGNIYNIEDDKKWNEENNKLIKQQTASNKEKAEEER
                     ERKKLEDEANRLAEKNNISPNDFKQKKKKNLGI"
                     /name="MobA/MobL family protein"
     gene            3177..3719
                     /locus_tag="HC680_30035"
     CDS             3177..3719
                     /locus_tag="HC680_30035"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="QIV32012.1"
                     /translation="MVRRKITVSDKTKELFKPFFDLSSYKEKKEGFEEEEYKRLVELCF
                     KSMGKGKLSINRPMATGKGILTFIYRTDKDLLLDEFIDRFEKKITKKRYMDFLLFILVD
                     DTKNIEKIEKMFTRICGVDIEDNVLKAIKCLKADGYDYKGFGDLIDYFEGLKRVRLEKE
                     ELNKIMASSKNKKRGRL"
                     /name="hypothetical protein"
     gene            3716..4018
                     /locus_tag="HC680_30040"
     CDS             3716..4018
                     /locus_tag="HC680_30040"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="QIV32013.1"
                     /translation="MRRTPEQRKAYLEAQLNSVKAKINKQKRKDYTVKKRETDHLKYTF
                     AGDILKVMGCDVREVDLSLILGAVFYATSENANPKNVEIYRKKGLEILKENKKEI"
                     /name="hypothetical protein"
ORIGIN
        1 atgtttacag ggacaagtct aattaataaa agtaggtctg tcaatagacc ggataatcta
       61 aaagagtttg ccagtgtaaa cggtgaacga ataacagaaa gaaaaaaaga gacctttaat
      121 attgctttgt ctatgaaaga caaaggcgaa gatctacaag acgagacatt aactaaaagg
      181 gctgaaaggt ctttaaagtg ttcttctttt cgttatgtcg ctgttgttaa tgggcaagct
      241 caaaccttat atactcaccg ttgcaaaggt cgccattgtc aggaatgcca aagaattaag
      301 gcttatatct ggcagaaaaa aacagagtct atttttccaa aactggaaga aaattattta
      361 aatgcaaaat atttatttgc aacatttacg attaaaaacc caaaaataac agatctaagg
      421 gttgttttat cggtaatgaa taaagcagca aataggcttt ttaaaatgaa aaaatataaa
      481 gattttattc ttggcggtat ccgttcgacg gagatcacca ggggaaaatc tggggctgac
      541 gaatgtcacc cacacttcca ttttttgtta atggtaaaag ggaattacgg taaaaaatac
      601 tatgtaaatc aagaagattg ggggaaagat tggggggatt gcctggctta tgaatgtgat
      661 aaggcagggt atccgtataa cccaatcgac tatcctcgcg ggttcccaat cgtggacgtc
      721 gttagggcta tggataaaga aaagaaaatt gaaatcacta ataagaatat taaaaattcg
      781 ggtgaagcga ttataaatta tgttctaaaa tattccgtca agggcagtga tattttagac
      841 cataaaaaag gaaaaaatga taattggttt tttgaatttg ataagcagat taaaggctgt
      901 cgaatgataa caccagttgg agtttttaaa aaatatctaa gcgaaattaa aaaagatccg
      961 tttgattatg atattgaaaa agcaaaaata gaggaaagat taggagaagg ctatcaggtt
     1021 aataaagcta tatttaaaaa aggcgattat aaacttgaaa ataaaaaaga taatgaaggt
     1081 tatttattag aggcattgga agcaaaagca tataattatc aacaattata tttaactatg
     1141 tatagcgatt atattaaatt ctacaacgac actaacaggg aaatatctaa attagaagat
     1201 aagttattta atgaagataa tatgttgatc gagtctaaaa taggaagatt attattaatt
     1261 caggaagata gaaaaaaacg aattaataac actattgaaa gtttaaaaag ggtcggctat
     1321 cttaaagaag aaaaagggct ttactatgac gaatggggat cgctttgggc aacatttgaa
     1381 attgaaaaac ctaatattga aatcgttgaa attaatgatt ttgctgatat gtttgaggtg
     1441 tggtaatgaa aaagaaacag aagcctaaaa aaagaaatag gaacagaaag agcaaatttt
     1501 ttaaaatgct cttagcttca gttcgtgaag ctgtcgaaat taaaaaggga aacattgaac
     1561 cagcaaggat cacaatttta aagaaagagt agtatagtat attgtagtat atagccctat
     1621 atacctaaat ttttcttttt cttttgctta aagtcatttg gtgaaatatt atttttttca
     1681 gccagtctgt tagcctcgtc ctctaatttt ttcctctctc tttcttcttc ggctttttct
     1741 ttattgctgg ctgtttgttg tttaattaat ttgttatttt cttcattcca ttttttatcg
     1801 tcctctatgt tataaatatt tccgaactca tccattttgt gggtttctct aaatattctt
     1861 tcctcttctt tatttcttct tctctcttcc ttgttttctt tttttattct cctctcctct
     1921 atggaatgct ttattttatc aggaactgat tttattgttt ctgttaattt atctaattta
     1981 tcatttagaa tattgtttat ttttgagtcg gtgattttgt tgtttaaatt tctaatagct
     2041 tcggaaatag atttatatat tttagacggt ctaaattttt tatctaattc tttttgtatt
     2101 tctcttaatt ctcttgtgtt tttaattcta aaatttttag ccttttttaa tatttgtttt
     2161 ttagcctcct gttcctgttt tcttattgcc tgaaattttg gatcgcccca gtctttcttg
     2221 ctgatagttt tcattgctgg tctgtctaat tctatagcct tggaagcaag ttttattttt
     2281 tcctccaggt ctgttgtttt gtccatttcc tccagtgctt ctttcatttg ttcttttaat
     2341 gttaaatggc taatggttat atcatgccca gcctttaata aatgttcgtt cgccactttt
     2401 gcccataatt ccctccagta taaagtcgtt tcttttttat cccactccct aacttttcca
     2461 ccaaatccct ccggtgttaa ttctctggta gttgttttaa tatggctatg aggttgggtg
     2521 tctatatcgt gaatagccag atctacaatc ataccctttg atacaaaagc ctgttttgca
     2581 aagtctaaaa ttaaggcttt gttctgttct ggggatagct ctatgggtag ggaaatttta
     2641 aagtctttgg caagcctggc atcctttctt ttctcaatac cctctatggt gttccatagg
     2701 gtcaacggtg aagctgtaag gctctcaggg gcattctcag gggctaaaat gcctgaatag
     2761 tataaccccc ccttctttgt gtagtcgtag gttgtgcctg ttcgttcgtc tgtgtatctg
     2821 gctctgttct ggtatgcaga agcagcaaca gacgaagccg attttttgcc tgaacttctg
     2881 cttacattgg aaacatcaaa ataatatata gccatattgt aaaacctcca cttttctaat
     2941 ttttttgggg tttggttttt gcttttcttt tttcccgttt acggggaaaa accctgtcat
     3001 tgcgttagca atgcgtagaa gggcttcaag taatttttct ttttcgtaaa ctcaaaataa
     3061 aaaactttca gaacggcaaa aatgcttttc cttattttag atataacata aatttgacta
     3121 aagtaaattg tggaggtata tggttattaa ttaatctaaa tataatggag gtttttatgg
     3181 taaggaggaa aataacagta tcagataaaa caaaggaact atttaaacct ttttttgatt
     3241 tgagttcata caaggagaaa aaagaaggct tcgaagaaga agagtataaa agactcgttg
     3301 agttgtgttt taaaagtatg ggaaaaggaa aactcagcat taatagacca atggcaaccg
     3361 gtaaaggaat tttaactttt atatatagga ctgataaaga tttattgtta gacgagttta
     3421 tagatagatt tgagaagaaa ataactaaaa aaagatatat ggattttttg ctttttattt
     3481 tggttgacga tactaaaaac atagaaaaaa tagaaaaaat gtttactcga atttgtgggg
     3541 tagatattga agataatgtt ttaaaggcta ttaaatgttt aaaggctgac ggttatgatt
     3601 ataaagggtt tggtgattta attgattatt ttgagggttt aaaaagggtt agattagaaa
     3661 aagaggaact taataaaatt atggcttcaa gtaaaaataa aaagaggggg agattatgag
     3721 aagaacacca gaacagagaa aagcatattt ggaagctcag cttaatagtg taaaagcaaa
     3781 gataaacaag cagaaaagaa aagattacac tgttaagaaa agagaaacgg atcatctaaa
     3841 atatactttt gcaggtgata ttttaaaagt tatggggtgc gacgttcggg aggttgactt
     3901 gtctttaata ctcggtgccg ttttttatgc tacaagtgaa aatgcaaacc ctaaaaatgt
     3961 agaaatatat agaaaaaaag gattggaaat tttaaaagaa aataaaaaag aaatttgaca
     4021 aaaacataat tagaatatat ttaatatata gtcgtttata tatttagtat cctttcctgt
     4081 ggagagttaa gaaattattt attaatatat atacggctaa tttgccccat ttatggggat
     4141 attggagagg ctaacttagg ttagcctttc gtcctttctg ataccgttca ccagtgccga
     4201 accgtcaagg agaaaatcgg gggttccctt ttaagggttc cgattttgta cttgtacggc
     4261 tctccaatca atacacactt ggcaaaggtg gaaggtgaac aaagtgagcc ttctacctgt
     4321 taagccgtct ttaaatgttg ttcattcgtc caggattgca taactaagtt atatgcctat
     4381 accattgccc cggtaggggt tgcctttggt tttaggggtt tggtttgagg ttgccgaagg
     4441 cgacccctcc ccttgtttag taagaaacaa atggaggcaa aacttagcct ctaaaactcc
     4501 cctgaaagcc ccgtcattac tggctttaac cccatttttt tagcagtttt caaggggggt
     4561 aaatagcact ttttgctaaa gaattttaga acaaaaaata atcaattccc cggatatggg
     4621 acagcaccct ctaaacctcc ccaaaacacc ccaaaaaatg ggacgacacc ttttaaaact
     4681 atccgacaaa cggaagattt gggacggaac atttagaaca ccggtttttt ggtgtgaaaa
     4741 atgggacggg tctaaccgta acggcataaa aacacggaaa aaatgggacg gtatcgactt
     4801 ttggcggtgg gggaagtttt ggaggtagat ctgataagtg cttgactgat ttgacaaaaa
     4861 gaaaaaaccc cgtaaagttg gaattgccta gattcataca atacggggtt tttcttaat
//
