LOCUS       CP043013                3770 bp    DNA     circular BCT 26-AUG-2019
DEFINITION  Escherichia coli strain 388755_gen plasmid unnamed2, complete
            sequence.
ACCESSION   CP043013
VERSION     CP043013.1
DBLINK      BioProject: PRJNA315192
            BioSample: SAMN12598951
KEYWORDS    .
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 3770)
  AUTHORS   Greig,D.R., Byrne,L., Kaindama,L., Aird,H., Jorgensen,F., Stoker,K.,
            Reaney,S., Jenkins,C., Dallman,T.J. and Gally,D.L.
  TITLE     Application of short and long-read sequencing during the
            investigation a small cluster of cases of Shiga Toxin-producing
            Escherichia coli O157:H7
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 3770)
  AUTHORS   Greig,D.R., Jenkins,C. and Dallman,T.J.
  TITLE     Direct Submission
  JOURNAL   Submitted (19-AUG-2019) Gastrointestinal Bacteria Reference Unit,
            Public Health England, 61 Colindale Avenue, London, London NW9 5EQ,
            United Kingdom
COMMENT     ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.4.2
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 60x
            Sequencing Technology  :: Oxford Nanopore MiniION
            ##Genome-Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..3770
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="388755_gen"
                     /isolation_source="feces"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /plasmid="unnamed2"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2017"
                     /collected_by="Gastrointestinal Bacteria Reference Unit,
                     Public Health England"
     Typing          complement(3509..3734)
                     /name="MOB_unknown"
                     /typing="oriT"
                     /tool="MOB-suite"
                     /identity="89.583"
                     /coverage="99.0"
                     /evalue="1.05e-76"
     Typing          225..754
                     /name="rep_cluster_2350"
                     /typing="replicon"
                     /tool="MOB-suite"
                     /identity="94.413"
                     /coverage="97.0"
                     /evalue="0.0"
     Typing          complement(3180..3499)
                     /name="MOBF"
                     /typing="relaxase"
                     /tool="MOB-suite"
                     /identity="99.065"
                     /coverage="100.0"
                     /evalue="6.92e-63"
ORIGIN
        1 atgaacaagc agcagcaaac tgcactcaac atggcgggat tcataaaaag ccagagcctg
       61 acgctgctcg aaaaactgga cgcactcgat gctgacgagc aggccaccat gtgtgagaag
      121 ctgcacgaac tcgcagaaga actccagaac agcatacaga cacgctttga agtagaaaat
      181 agcacagaga tataacgctc agggcaggat gccgaacggc acaacagagc gtaaggagaa
      241 aatgtcacat aaggcgctct tccgcttcct cgctcactga ctcgctacgc tcggtcgttc
      301 gactgcggcg agcggtgtca gctcactcaa aggcggtaat acggttatcc acagaatcag
      361 gggataaagc cggaaagaac atgtgagcaa aaagcaaagc accggaagaa gccagcaccg
      421 caggcgtttt tccataggct ccgcccccct gacgagcatc acaaaaatcg acgctcaagc
      481 cagaggtggc gaaacccgac aggactataa agataccagg cgtttccccc cggaagctcc
      541 ctcgtgcgct ctcctgttcc gaccctgcca cttaccggat acctgtccgc ctttctccct
      601 tcgggaagcg tggcgctttc tcatagctca cgctgttggt atctcagttc ggtgtaggtc
      661 gttcgctcca agctgggctg tgtgcacgaa ccccccgttc agcccgaccg ctgcgcctta
      721 tccggtaact atcgtcttga gtccaacccg gtaagacacg acttatcgcc actggcagca
      781 gccattggta actgatttag aggagtttgt cttgaagtta tgcacctgtt aaggctaaac
      841 tgaaagaaca gattttggtg actgcgctcc tccaagccag ttaccttggt tcaaagagtt
      901 ggtagctcag cgaaccttga gaaaaccacc gttggtagcg gtggtttttc tttatttatg
      961 agatgatgaa tcaatcggtc tatcaagtca acgaacagct attccgttga caaaaaaaca
     1021 agatctgtac atattcaaaa aaaacaacgg attgacccaa tggcacagaa cccgtttaaa
     1081 gcactaaata tcaatattga caagattgag tctgctctga cgcagaatgg cgtcacaaac
     1141 tattcctcta atgtaaaaaa cgaaagagaa actcacatat ctggcacata taaaggaata
     1201 gacttcttaa taaaactaat gccatcaggc ggaaatacca ctatcggaag agcgtctggg
     1261 caaaataaca cttactttga tgaaatcgcc ttgattataa aagaaaactg tttgtattca
     1321 gacacaaaga actttgaata caccattcca aaattcagtg atgatgacag ggcaaatcta
     1381 tttgaatttc tttctgaaga ggggataaca ataacagaag ataataataa cgatcctaat
     1441 tgtaaacacc aatatattat gaccaccagc aatggtgaca gggtcagggc aaaaatttac
     1501 aagcgcggct ctattcaatt ccaaggaaaa taccttcaaa tcgcgagttt gattaacgat
     1561 ttcatgtgct caatactaaa catgaaagag attgtcgaac aaaaaaataa agaatttaat
     1621 gttgacataa aaaaagaaac tattgagtcc gagttgcata gcaaactacc aaaaagcatc
     1681 gataaaatcc atgaagatat caaaaaacag ctatcatgct cgctaataat gaaaaaaata
     1741 gatgtcgaaa tggaagatta ctcaacatac tgcttctctg cattaagagc catagaaggc
     1801 tttatatatc aaatacttaa tgatgtttgc aatccatcat catcaaagaa ccttggcgaa
     1861 tacttcactg aaaacaaacc caaatatata atcagagaaa tacaccaaga aactataaat
     1921 ggtgaaatag cggaagtttt gtgtgaatgc tacacttact ggcatgagaa caggcatggt
     1981 ttgtttcata tgaaaccagg aatagctgac acgaagacaa ttaacaaatt agaatcaatc
     2041 gcaatcatcg ataccgtttg ccaattaata gatggtggcg tagctaggtt gaaattatga
     2101 aaaaagataa aaaatatcaa atagaagcaa taaaaaataa agataaaact ttatttattg
     2161 tctatgctac tgatatttat agcccgagcg aatttttctc aaaaatcgaa tccgacttga
     2221 agaaaaagaa aagcaagggt gatgtttttt ttgatttaat aattcctaac ggtggaaaaa
     2281 aagatcgtta cgtctatacg tcatttaatg gcgagaagtt ttcaagttac acattaaaca
     2341 aagttacgaa aactgatgaa tataatgatt tatctgagct ctcggcttcg ttctttaaaa
     2401 aaactttgat aagatcaacg taaaccttct atccaaagcc acatcatttg ctttgaaaaa
     2461 ggcattccaa tataatatag ctgacaacaa attaggaatc aatcgcaatc atcgataccg
     2521 tttgccaatt aatagatggt ggcgtagcta ggttgaaatt atgaaaaaag ataaaaaata
     2581 tcaaatagaa gcaataaaaa ataaagataa aactttattt attgtctatg ctactgatat
     2641 ttatagcccg agcgaatttt tctcaaaaat cgaatccgac ttgaagaaaa agaaaagcaa
     2701 gggtgatgtt ttttttgatt taataattcc taacggtgga aaaaaagatc gttacgtcta
     2761 tacgtcattt aatggcgaga agttttcaag ttacacatta aacaaagtta cgaaaactga
     2821 tgaatataat gatttatctg agctctcggc ttcgttcttt aaaaaaaact ttgataagat
     2881 caacgtaaac cttctatcca aagccacatc atttgctttg aaaaaaggca ttccaatata
     2941 atatcaagcc agaagacatt taccataacg tctcattacg cgcaccgcca aaacgcgctg
     3001 aacgcgattc tgacgcagac accgcaaaaa gagatgtttt ccccggggta aaccggaaaa
     3061 atgcgtcagg atcgctttca gctcactgca tagctatgca tgaaagtgaa tggcgatcgg
     3121 tttgggggct tacggcgttc ataccgtctg ttttcgacag tttctctccg ggaagctaat
     3181 ctgccataag cctggataac agggcacggt gatactccgt aatagcgatc agcacctccg
     3241 catactctct gtccccgaca cgcttgccgt cgataaagag ttttttctgc aacgccccca
     3301 gtcgcataac ttctttcagc acccggtcat cagtcagtga gttaactttc ttaccgagag
     3361 ctgccgcccg taaaaaacca gaaacggtct tgccgcattc agcagccctt tttctgattt
     3421 cctggtcttc ttctgccgtc agacgaacag ggcgactgat agcccgcctg cgcgtattac
     3481 ttccacttcg ttttgtcata aaacatggct ccgtatctga catggggtgt cggggcgaag
     3541 ccctgaccag ggtaattgta atagcgtgca tgtatgcgcg gtataacaat tgcacatcct
     3601 gtcctgtctg caagttcgaa ttaccaacaa agcactgctg ttttttggca gtgacagtgt
     3661 tgtctgactg aaatgtccgt cggcagaata ccggcggtaa gacggtcgaa aagtggtgcg
     3721 cgatataatc acacgacgca gatgacagac agaacggaga aaacagaaag
//
