LOCUS       CP014300                4744 bp    DNA     circular BCT 09-AUG-2018
DEFINITION  Klebsiella pneumoniae strain KP38731 plasmid unnamed5, complete
            sequence.
ACCESSION   CP014300
VERSION     CP014300.1
DBLINK      BioProject: PRJNA311034
            BioSample: SAMN04457965
KEYWORDS    .
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Klebsiella/Raoultella group; Klebsiella.
REFERENCE   1  (bases 1 to 4744)
  AUTHORS   Krishnamurthy,M., Lovett,S.P., Koraleva,G., Ladner,J.T.,
            Palacios,G.F. and Panchal,R.
  TITLE     Whole genome sequencing of Klebsiella pneumoniae and Acenitobacter
            baumannii
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4744)
  AUTHORS   Krishnamurthy,M., Lovett,S.P., Koraleva,G., Ladner,J.T.,
            Palacios,G.F. and Panchal,R.
  TITLE     Direct Submission
  JOURNAL   Submitted (05-FEB-2016) USAMRIID, 1425 Porter St, Frederick, MD
            21702, USA
COMMENT     ##Genome-Assembly-Data-START##
            Assembly Method                   :: HGAP v. 2.3
            Genome Coverage                   :: 150
            Sequencing Technology             :: PacBio
            ##Genome-Assembly-Data-END##
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 02/08/2016 12:47:20
            Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline
            Annotation Method :: Best-placed reference protein set; GeneMarkS+
            Annotation Software revision      :: 3.1
            Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA; repeat_region
            Genes (total)                     :: 5,928
            CDS (total)                       :: 5,802
            Genes (coding)                    :: 5,417
            CDS (coding)                      :: 5,417
            Genes (RNA)                       :: 126
            rRNAs                             :: 9, 8, 8 (5S, 16S, 23S)
            complete rRNAs                    :: 9, 8, 8 (5S, 16S, 23S)
            tRNAs                             :: 86
            ncRNAs                            :: 15
            Pseudo Genes (total)              :: 385
            Pseudo Genes (ambiguous residues) :: 0 of 385
            Pseudo Genes (frameshifted)       :: 351 of 385
            Pseudo Genes (incomplete)         :: 31 of 385
            Pseudo Genes (internal stop)      :: 13 of 385
            Pseudo Genes (multiple problems)  :: 9 of 385
            ##Genome-Annotation-Data-END##
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
FEATURES             Location/Qualifiers
     source          1..4744
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /strain="KP38731"
                     /host="Homo sapiens"
                     /db_xref="taxon:573"
                     /plasmid="unnamed5"
                     /collection_date="01-Dec-2015"
                     /collected_by="USAMRIID"
     gene            complement(648..863)
                     /locus_tag="AXK16_00235"
     CDS             complement(648..863)
                     /locus_tag="AXK16_00235"
                     /inference="EXISTENCE: similar to AA
                     sequence:RefSeq:WP_015328239.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mobilization protein"
                     /protein_id="AQU64349.1"
                     /translation="MTELEKQLLSALEQLQQDYSRRLDEWESAFEEWRKMSGLMQRENA
                     ALSERVSGLSRQVQSLSEQLRRLSTG"
                     /name="mobilization protein"
     gene            complement(870..1367)
                     /locus_tag="AXK16_00240"
     CDS             complement(870..1367)
                     /locus_tag="AXK16_00240"
                     /inference="EXISTENCE: similar to AA
                     sequence:RefSeq:WP_020325392.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mobilization protein"
                     /protein_id="AQU64350.1"
                     /translation="MSSLLTASRDFEEKSKAQQQLTEERLKAAFSKHENVVKSELNASA
                     KRINDAISAHEQGMNAAMQSNRLSVLRMVGRTWLTITMVSGLLFASLSGVLWYQGNRIA
                     ANLAEIRQQRDTLSKLQMQTWGVTYLENRNGRFLVLPEGMKAETGRKVDNKTRNAVKLV
                     RE"
                     /name="mobilization protein"
     gene            complement(2045..2365)
                     /locus_tag="AXK16_00245"
     CDS             complement(2045..2365)
                     /locus_tag="AXK16_00245"
                     /inference="EXISTENCE: similar to AA
                     sequence:RefSeq:WP_015328236.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mobilization protein"
                     /protein_id="AQU64351.1"
                     /translation="MLTMWVTEDEHRRLLERCDGKQLAAWMRQTCLDEKPTRAGRLPSI
                     SPALLRQLAGMGNNLNQIARKVNAGGAGHDRVQIVAALMAIDAGLERLRHAVLEKGPDD
                     DC"
                     /name="mobilization protein"
     gene            3846..4073
                     /locus_tag="AXK16_00250"
     CDS             3846..4073
                     /locus_tag="AXK16_00250"
                     /inference="EXISTENCE: similar to AA
                     sequence:RefSeq:WP_010615788.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="AQU64352.1"
                     /translation="MTKVIYSALAAIIALSALTGCTRTSYAIHTNDGRTIVSDGKPKES
                     DAGLIGYTDANGVKQQINKQEVKEVSEIPN"
                     /name="hypothetical protein"
     gene            complement(4498..4713)
                     /locus_tag="AXK16_00255"
     CDS             complement(4498..4713)
                     /locus_tag="AXK16_00255"
                     /inference="EXISTENCE: similar to AA
                     sequence:RefSeq:WP_015328239.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mobilization protein"
                     /protein_id="AQU64353.1"
                     /translation="MTELEKQLLSALEQLQQDYSRRLDEWESAFEEWRKMSGLMQRENA
                     ALSERVSGLSRQVQSLSEQLRRLSTG"
                     /name="mobilization protein"
     Typing          complement(2467..2654)
                     /name="MOB_unknown"
                     /typing="oriT"
                     /tool="MOB-suite"
                     /identity="87.368"
                     /coverage="87.0"
                     /evalue="5.789999999999997e-54"
     Typing          2634..3118
                     /name="ColRNAI_rep_cluster_1987"
                     /typing="replicon"
                     /tool="MOB-suite"
                     /identity="90.593"
                     /coverage="93.0"
                     /evalue="0.0"
     Typing          complement(533..2055)
                     /name="MOBP"
                     /typing="relaxase"
                     /tool="MOB-suite"
                     /identity="99.213"
                     /coverage="100.0"
                     /evalue="0.0"
     Typing          complement(2052..2365)
                     /name="MOBP"
                     /typing="relaxase"
                     /tool="MOB-suite"
                     /identity="92.453"
                     /coverage="99.0"
                     /evalue="1.8e-58"
ORIGIN
        1 gaaagtaatt tattcagcgc tagctgcgat cattgcactt tcagctctga caggatgcac
       61 aaggacaagc tatgcaattc atacgaatga tggccgtacc attgtgagcg atggcaaacc
      121 caaagaatcg gatgctgggt tgattggcta taccgatgct aacggcgtga agcagcaaat
      181 taataaacag gaagtcaaag aagtctcaga gattcctaac tgatcataaa aaaccgccta
      241 gtggcggttt ttttttacat gctagtaacc gtccaattaa acataacatc ccttactcgc
      301 accgcgccgg aggcactcag ggcgtttctg atggctgacg ggcaaaaggt ggtggcaagt
      361 acaccgaaaa ccaccagaaa cgcacctgat ttattttacg catatgcatc acttattcac
      421 atcactgcat agccggtgat ttcggttaaa aaagactctc tgtgtgctga aatcgcagaa
      481 aatggccatg atccccgtca cgctcaggcc acctgagacg ggcgtttatc agtctccata
      541 ctccctgtca ccatgagata atgtgcgttg ccgttccggt accagatctg ctgtcttctc
      601 tggttccttt tccgttgttt gcccgtatcg ctgttgctca atctcattca gcctgtcgat
      661 aaccggcgca gctgctcgct caaactctgc acctgcctgc tcaagcccga cacgcgctcg
      721 ctcagcgccg cgttctcccg ttgcataaga ccagacatct tccgccattc ctcgaaggcg
      781 ctctcccact cgtccagcct tctcgagtag tcctgctgta gctgctctaa cgcgctcagc
      841 aattgttttt ccagttccgt cattctgctc tactcccgta ccagcttcac cgcgttccgc
      901 gtcttgttgt ccaccttccg gcccgtttcg gctttcatcc cctccggcag caccagaaac
      961 cgtccgttgc ggttttccag ataggtcacg ccccacgtct gcatctgcag tttcgacagc
     1021 gtatctctct gctgcctgat ttccgccagg ttcgccgcta tccggttccc ctggtaccac
     1081 agcaccccgc tcaggctggc gaacagcagc cctgacacca tggtgatggt cagccacgtc
     1141 cgcccgacca ttcgcagcac gctcagccgg ttcgactgca tcgccgcgtt catcccctgt
     1201 tcgtgggcgc tgatggcgtc gttgattctc ttcgcgcttg cgttcagttc cgatttgaca
     1261 acgttctcgt gcttgctgaa tgcggctttc agcctctctt cggtaagctg ctgctgtgct
     1321 ttcgatttct cctcgaagtc cctcgaggcc gttaaaagac tgctcataaa tggctcccct
     1381 cagtcggata tttcgccccc cgtccgggtc ggcaatgctg atactgtttt ttgtggttct
     1441 gaccacctca aaaccggccg ctgtgagcgc ccctgtgacg tcatcacgcg ttttcagctc
     1501 tcctgatgag gctaacatca gcaaaccccg tgtaatcgtc tctgcggctt cctgcttcgt
     1561 ttctggcagt cctgacggcg tgaccagcgc ccgccggttc tccgggtcgt tcggatcatg
     1621 tagccccagc ctgccgttga ccactgtctg ccacgcatcg atgcgcggcc ggtcggcacg
     1681 atcgtaatac ggctggaggc gtttccccgt cagtaattcg gtattgggga tcagaaaatt
     1741 cagctcaaga cgacccttgt ctgcgtgttc cacccacaga atgctgtact gatctttatc
     1801 gagtccgggc atcagaaccc gctcaaagct ggccatcagt ttttcacgct gacccggcgg
     1861 cagatccgcc tccgcgaatg acagcacccc ggaggtatat tttttcacat acggcgacgc
     1921 atcaatcagc tcccggattt cttccggctt cccctgcagg acgctggcac cttcacgctg
     1981 ccggtcttta cccagaagat agtccaccgg accggcgccc ccgccgcgac cccgtggatg
     2041 gaatttaaca atcatcatcc ggcccttttt ccagtacggc atgccgcaac cgttccagac
     2101 cggcatcgat cgccatcagc gctgccacga tctgcacccg gtcatgaccg gcaccaccgg
     2161 cgttcacttt ccgggcgatc tggttcaggt tattgcccat gccggcaagc tgacgcagca
     2221 gcgccggcga aatcgaggga agcctgccgg cgcgtgtcgg tttctcatca aggcaggtct
     2281 ggcgcatcca cgccgccagt tgttttccgt cgcaccgctc aagcaaccgc cgatgttcgt
     2341 cttccgtcac ccacatcgtg agcatcttgt tgcgtttatc tgccagaatc gcctcctgat
     2401 aacgccgtgg cggacgggaa agcctttccc ggtcggcgcg gggttggaca agccgcaggc
     2461 gcgtcagtgg tttttagcgg gtttcggggc gcagccctga accagtcacg tagcgctagc
     2521 ggagtgtata ctggcttaat atgataaatc gaagtggtaa ttcgggaaag tgcttcatgt
     2581 ggcaggggaa aaattcagct gcggggcgta agtgcaaaat gcaggtggtg atgacatgac
     2641 gcctcctcgc tcactcggtc gctgcgctcc tgccgtgaga cggcggcggg cgttacctgc
     2701 tcacgaatga caagatagag agactgcgct gaaatcagga agggctggag aaaggatgcg
     2761 gcgttgccgt ttttccatag gctccgcccc cctgacaagc atcacaaaat ctgacgctca
     2821 aatcagtggc ggcgaaaccc gacaggacta taaagatccc aggcgtttcc ccctggtagc
     2881 tccctcgtgc gctctcctgt tcctgccttt cggtttaccg gtgtcattcc gctgttatgg
     2941 ccgcgtttgt ctcattccac gcctgacact cagttccggg taggcagttc gctccaagct
     3001 ggactgtatg cacgaacccc ccgttcagtc cgaccgctgc gccttatccg gtaactatca
     3061 tcttgattcc aacccggacg gacacgaaaa aacgccactg gcagcagcca ctggtaacaa
     3121 gggtgtacaa gatggtattt aaagaggtct tgaagtggat gcctgactgc ggctacactg
     3181 aaagaacagt tttggtaatt gcggtcttgt acacccagtt acctcggtta gagaatctgc
     3241 caggatcctc tatccatcga aaaagccacc ggaaggtggt tttttcgttt tcagagcaag
     3301 agattacgcg cagaaaaaaa tgatctcaag aagatccttt cttcgcagga tcgatatcca
     3361 tgggatttat gatgttcctt gtaatgaatc catcactgga atgcatttat cggcggaaga
     3421 aatccccctg cgttacaaaa tgattatgat tagcaactag ccgtttaaca cagcattctg
     3481 ccacctgatt taacataaga tttctttttt acattttatc tccccttccg atgcagaagc
     3541 caaaacaatg cctattatta gtaagttaga tactaacttc gccagtacta gggatatggg
     3601 atatctaaaa aagcattggt ttctcttaat aacttcagtt ttaaccttct cagtaaccgg
     3661 cacctcctaa aatcaggcca ttaaaactac cgacggacgg actatcgtcg cagacggtaa
     3721 gcctcagatt gatagtgaca ccgggctggt ttcttacaag gatgcacaga caggaaaaac
     3781 agaacatatc aaccgcgaca aaattaccaa catgagtgaa ctagataact gataaggaac
     3841 gttctatgac gaaagtaatt tattcagcgc tagctgcgat cattgcactt tcagctctga
     3901 caggatgcac aaggacaagc tatgcaattc atacgaatga tggccgtacc attgtgagcg
     3961 atggcaaacc caaagaatcg gatgctgggt tgattggcta taccgatgct aacggcgtga
     4021 agcagcaaat taataaacag gaagtcaaag aagtctcaga gattcctaac tgatcataaa
     4081 aaaccgccta gtggcggttt ttttttacat gctagtaacc gtccaattaa acataacatc
     4141 ccttactcgc accgcgccgg aggcactcag ggcgtttctg atggctgacg ggcaaaaggt
     4201 ggtggcaagt acaccgaaaa ccaccagaaa cgcacctgat ttattttacg catatgcatc
     4261 acttattcac atcactgcat agccggtgat ttcggttaaa aaagactctc tgtgtgctga
     4321 aatcgcagaa aatggccatg atccccgtca cgctcaggcc acctgagacg ggcgtttatc
     4381 agtctccata ctccctgtca ccatgagata atgtgcgttg ccgttccggt accagatctg
     4441 ctgtcttctc tggttccttt tccgttgttt gcccgtatcg ctgttgctca atctcattca
     4501 gcctgtcgat aaccggcgca gctgctcgct caaactctgc acctgcctgc tcaagcccga
     4561 cacgcgctcg ctcagcgccg cgttctcccg ttgcataaga ccagacatct tccgccattc
     4621 ctcgaaggcg ctctcccact cgtccagcct tctcgagtag tcctgctgta gctgctctaa
     4681 cgcgctcagc aattgttttt ccagttccgt cattctgctc tactcccgta ccagcttcac
     4741 cgcg
//
