LOCUS       CM009032                6328 bp    DNA     circular CON 13-DEC-2017
DEFINITION  Klebsiella pneumoniae strain Kp06-2017 plasmid pOXA-232, complete
            sequence, whole genome shotgun sequence.
ACCESSION   CM009032
VERSION     CM009032.1
DBLINK      BioProject: PRJNA401091
            BioSample: SAMN07594309
KEYWORDS    WGS.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Klebsiella/Raoultella group; Klebsiella.
REFERENCE   1  (bases 1 to 6328)
  AUTHORS   Mancini,S., Poirel,L., Tritten,M.L., Lienhard,R., Bassi,C. and
            Nordmann,P.
  TITLE     Emergence of an MDR Klebsiella pneumoniae ST231 producing OXA-232
            and RmtF in Switzerland
  JOURNAL   J. Antimicrob. Chemother. (2017) In press
   PUBMED   29194479
  REMARK    Publication Status: Available-Online prior to print
REFERENCE   2  (bases 1 to 6328)
  AUTHORS   Mancini,S., Tritten,M.-L., Lienhard,R., Bassi,C., Poirel,L. and
            Nordmann,P.
  TITLE     Direct Submission
  JOURNAL   Submitted (01-SEP-2017) Department of Medicine, University of
            Fribourg, 3 rue Albert Gockel, Fribourg 1700, Switzerland
COMMENT     ##Genome-Assembly-Data-START##
            Assembly Method        :: GS De Novo Assembler v. 7.5.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 50.0x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            Bacteria and source DNA available from Prof. Patrice Nordmann.
FEATURES             Location/Qualifiers
     source          1..6328
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /strain="Kp06-2017"
                     /isolation_source="blood"
                     /host="Homo sapiens"
                     /db_xref="taxon:573"
                     /plasmid="pOXA-232"
                     /geo_loc_name="Switzerland"
                     /lat_lon="47.15 N 6.9917 E"
                     /collection_date="28-Feb-2017"
                     /collected_by="Hopital du Jura Bernois"
                     /note="genotype: ST231"
     ARG             240..1033
                     /name="blaOXA-232"
                     /gene="blaOXA-232"
                     /gene_name="OXA-48 family carbapenem-hydrolyzing class D
                     beta-lactamase OXA-232"
                     /tool="amrfinderplus"
                     /drug_class="BETA-LACTAM"
                     /identity="100.0"
                     /coverage="100.0"
     Typing          1984..2905
                     /name="rep_cluster_1195"
                     /typing="replicon"
                     /tool="MOB-suite"
                     /identity="81.974"
                     /coverage="98.0"
                     /evalue="0.0"
     Typing          4020..5470
                     /name="MOBP"
                     /typing="relaxase"
                     /tool="MOB-suite"
                     /identity="98.554"
                     /coverage="100.0"
                     /evalue="0.0"
ORIGIN
        1 aaatgattga aaggtggttg taaataatgt tacaatgtgt gagaagcagt ctaaattctt
       61 cgtgaaatag tgatttttga agctaataaa aaacacacgt ggaatttagg taatagttaa
      121 agcttgtgcc tgattgttgc cacaattggt cagcagtttg ctagggaatg agagggcaga
      181 gaatgataag cttagcactt aatttgtatg gatatattgc attaagcaag gggacgttat
      241 gcgtgtatta gccttatcgg ctgtgttttt ggtggcatcg attatcggaa tgccagcggt
      301 agcaaaggaa tggcaagaaa acaaaagttg gaatgctcac tttactgaac ataaatcaca
      361 gggcgtagtt gtgctctgga atgagaataa gcagcaagga tttaccaata atcttaaacg
      421 ggcgaaccaa gcatttttac ccgcatctac ctttaaaatt cccaatagct tgatcgccct
      481 cgatttgggc gtggttaagg atgaacacca agtctttaag tgggatggac agacgcgtga
      541 tatcgccgct tggaatcgtg accatgactt aattaccgcg atgaagtact cagttgtgcc
      601 tgtttatcaa gaatttgccc gccaaattgg tgaggcacgt atgagtaaaa tgctgcacgc
      661 cttcgattat ggcaatgagg atatctcggg caatgtagac agtttttggc tcgatggtgg
      721 tattcgcatt tcggctaccc agcaaatcgc ttttttacgc aagctgtatc acaacaagct
      781 gcacgtttct gagcgtagtc agcgcatcgt gaaacaagcc atgctgaccg aagccaatgg
      841 cgactatatt attcgggcta aaacgggata ctcgactagt atcgaaccta agattggctg
      901 gtgggttggt tgggttgaac ttgatgataa tgtgtggttt tttgcgatga atatggatat
      961 gcccacatcg gatggtttag ggctgcgcca agccatcaca aaagaagtgc tcaaacagga
     1021 gaaaattatt ccctagaagt ggttagcgcg tatttgtgtg aaatagccgt catataagct
     1081 gtaaagatat atggacaaaa tgctgatgct cgatgcgctt gtagttaatg gctcatactt
     1141 aatcggtcag gcctaatcga cttaagctcc gcgcgttaac tttcagcctg agcattagca
     1201 tcacattcct aaacgtaaaa agcctagcca atttgctagg cttttttgtt atctcaatgg
     1261 ccatggtcac tcaacatggg ggtgtgaata aaggagtggc gatgtcagta aaggtgaatg
     1321 ccgctgcgat aaagtgccta gcccatcaag gattgtaggc tttcttggct gctaaagcgt
     1381 ttgacgaaaa agtccaagaa ggcgctgata ttggttctcc atcattttca tctaccggtt
     1441 tactataggt caaccaggcc gtccttgccg gcgcttggga cgcagacgat ggcatcaaat
     1501 gcctcgctca aattcgtttc tacagaggcg ctttgggacc gcattcgctt tgctttcatg
     1561 ggggcatctg tcaatgtcag acatgaatcc tccgatatag gttgattttt gatctcttca
     1621 acacttggtg ttgtccgact agagagactt atatggatca gtattcttgc actgacaatg
     1681 gtgccactca atcccaagga tcgacctagt tagaggcgta gatcaagcaa ttcaaaacag
     1741 cgcagaagca gaaggaggtg gaaatatgtt ccagggtgaa aggttacatg caactaacgt
     1801 tgctctctag gatgtgcctg ctgtaacgta ttgtccagaa aagacaaccc cccgttatcg
     1861 cttgcatctt ggcggagctg cgaaaaacgg gggccgtgac gaatcacaag agaagtctat
     1921 cacatggatc atgccaaaca accccacgcc gccaataagc gcggtggtgc ttgagaaagt
     1981 gcgcacagct tgagctgttt cgggagcgcc tgccccggaa accctactat tccgacgagc
     2041 ttacaacggg cctacggatt gcggatgttg cccgcgccct tggtgcgcgt tacatccagc
     2101 cgaacgggcc aacgcaccgc cactggatcg tttttgacgt agaccatgca gccgctacgt
     2161 tatcttggga tgacgtaggc gctccagccc ctaacattac cgtcacgaac aaggccaacg
     2221 gccacgcgca tctgatctac ggactggata cgccgatccg cactgccccg gatggaaatg
     2281 cagcccctct gcggtatgcc gccgccatcg aggccgcgct ccgggagaaa ttaggggcgg
     2341 atatgggcta ctccgggctg atctgcaaga accccctgca tgagcactgg ctggtgcagg
     2401 tatgggaacc ccggctctac gatttagcct ggctatccga ttacctcgat ctgagctcct
     2461 acaatggccg caaatcgctt cctgagtacg ggcttgggcg aaactgtacc ctgttcgaga
     2521 aaacgcgcct gtgggcctat aaagcgatcc ggcagggctg gccggattac cccgaatggt
     2581 tggccgcttg tgttgaccgg gcatcaggat ataacgccca gttcgagcag ccgctccccg
     2641 caaacgaagt ccggcacacg gccaagtcca ttgccaaatg gacgcaccag cacctaagcc
     2701 ccgcagggtt cagagaggag caggcccgga gaggtgcgaa gggcggcaag gtatccaagg
     2761 gagggggaag gccgagcaat agcggtaagg acaagtccga tctattgccg gaggttctgc
     2821 ggcttaaggc tcaggggtac accaaccgcg atatagcgga cgatcttcaa atctccccca
     2881 gtacggtgag cgtttaccta aagcgtgatc gtccgtgatc gaaacaagcc ttatcagata
     2941 atagccccct ttaggggggt tcctgcgctc ttgtctttta gccttaaaaa atccttttag
     3001 cgcggatctt tggcgaggtg gacaactgcg cctgtccgtc catcgccccc ctgttttttc
     3061 ggggggtgtg ggcggcagca gttatccacg gagccgctct ttcccttgat cttgctctag
     3121 ggcttgcagt atcccgccca tggttgaata atgtactaag caaggctaca cagaggcccc
     3181 tctacctgct tcgcggtctc gggcctctgt ggccttgttc aggggtgcta cgcccccccg
     3241 aaaccccctg tggcccccgc tcgatccgcc ccttcgggac ggtctgcgcg gtggcttctt
     3301 ggctctggag aatggacgag gccctatgtc aacaacacag atagagaaag attcgagaag
     3361 gaaggcagtc aatggcgtta tttctagttt ccaactagag ggggaggcca taaccgatga
     3421 attcaaaatt ctacttgaag attatatcaa tggaaaaatt tccaccgatg aggtgttagc
     3481 tatggtaagt gacgaaccca caacaacgga atacgactac gaaatcaccc cccgcactct
     3541 cggtcttggc gggggctgga atctgcgttt gctggagaac ggcgaagagg tcggcggggg
     3601 tgttttcccc ttgccggagc actgcgattt tcgggatgaa aaggcgctcc agacgctact
     3661 cgatagcctc tatgaggacg ccttagcgga ggcctctgca tggctggcca gccgttaaag
     3721 cgcctccgct ctatcaagat ccgggtctca gatgcggagc ttgagcgcct gcgggagctc
     3781 tgccccaagg cccaactggc ggagtggatg cgggagcaat gtctcggtgt tgcgcaaccc
     3841 cagcgccgaa cgccggcgcc taccgtagat ccggcgctct tgcggcagtt ggccggaatg
     3901 ggcaacaacc tgaaccagat cgcccggcgc gttaattccg gggagtgggg gccgttggat
     3961 cggctgcgca tcatagcgga gctgtccgct ataggccgcg agctggagga actgcaccat
     4021 gatcatcaaa ttccataacc gtggggtagg ccggggctcc gggcctgttg gctacttgtt
     4081 gggccgtgac gggaaccggg aaggcgcaac gctcgaccgg ggcaaccctg cggtgattga
     4141 agccctgatt gattccagtc cctacgccaa aaaatacacc tctggcgttc tgtcgtttgc
     4201 cgaggctgat ttacccaggg cgaccaagga caagctgatg agcgactttg aaaaggcgct
     4261 cctgcccgga ctggagggca accagtacgc tgttttgtgg gtagagcacc gcgacaaggg
     4321 gcggctggag ctgaattttg tagtcccgaa catcgaattg cagagcggga agcggctgca
     4381 accctacttc cacaaggccg acaatccgcg cctcgatgcg tggcgaaccg tggtaaacgg
     4441 ggagctgaaa ttgcacgacc cggacgatcc gttaaaccgt caggccgtta tcacgccaaa
     4501 ggatttgccg agggggcaca aggaggccgc tcaggccatt acagacgggc ttttacgcat
     4561 ggccggagca ggggagatcc agagccgcga tgatgtgcgc aaagccttgc agggtgcggg
     4621 tttcagcgtg gtacgcgaaa ccaaaaacag cctgagcatt gccgacccgg acggggggcg
     4681 gaacatccga ttaaaggggg tgctgtatga gcaagatttt agacatggcg aaggacttcg
     4741 agcagagctc gaagcagcag gccaacgcta tcgagaagcg tctgaccgaa gaattcacga
     4801 ggcacgagaa agctatctcc ggggcgttga aatcaagcga ggagaaaatg agcgccgcta
     4861 ttgccgagca cagccagaaa atgggctggc tgttgctcaa aacgtggatc tggatgctgg
     4921 tcagcatcgt cctgttcttg agcgcaacga gcgggatcct ctggtatcag ggggaattga
     4981 tagcggagcg gcaagccact ctccaagcct tggcagagaa gggcggcaag ctaaagctga
     5041 cccagtgcgg gaagaaattg gagcaccttt gcgtgcagat ctccgacccc aatccaaccg
     5101 tttgggggaa ggatacctat tggatcgtgc cgaaggggta ctaaatgacg ggattggagc
     5161 gggaattgct ctgcgcgttc gaggctttgc agagcgcata cgagcagcag cacaaggcat
     5221 ggcaggaaag ctacgcgaac ttggcgagca tgtacgagag caccaaacaa gaggccgaga
     5281 tcagcagggc agcagcagag cgattgacga ggcaggtgaa cggcttaacg cagcaagtgg
     5341 acggcttgag caagcagctg gagggcttga ccgggctagt cagcaagttg caaaagaaag
     5401 ggaacacagg ctcctgaagg cactggatcg aggctgggag cgtggagaca gatcgcgagg
     5461 ctttgagcgt tgacggaaca aaacggccgt cagttataaa aaaaggaaag tgctatcact
     5521 ttccttttat cggcgggaat tatcgttgag ttcttctatg ccatttttca tagtagtaac
     5581 tgtaatcttc atctctacca ccagattcaa tccagtcatc atactcaggg ctatttttga
     5641 aatctgaatc agacatgcta actccttgtt attagttggc ttctatggaa gctagcgcac
     5701 cgtgaagtta tgatcaacga tgtagtccac atcattgtcg aaatgtgcgt tcagctagtc
     5761 ttcggtgttt tctgctttat ttctagcggc gattctcgcg tctgcccatg cggcagactt
     5821 tttagcctgt tctcgttgtt cttcggttga agactcgctg ttgagaactt tgttgctcgt
     5881 ttgtttgacc accgaatcca aacctgttgt tgctgcaaaa tgagctaggt taacaactcc
     5941 cttacctaac aacttggcac tagcgattgc ggtttcttta gccccaaaag catcagacac
     6001 ctcctcaagc gctttagata ggttaaaaaa tcccatactc cccctaagaa tatcatcaat
     6061 aaaattgagt gttgctctgt ggataacttg cagagtttat taagtatcat tgcagcaaag
     6121 atgaaatcaa tgatttatca aaaatgattg aaaggtggtt gtaaataatg ttacaatgtg
     6181 tgagaagcag tctaaattct tcgtgaaata gtgatttttg aagctaataa aaaacacacg
     6241 tggaatttag ggactattca tgttgttgtt atttcgtatc ttccagaata aggaatccca
     6301 tggttaaaaa atggcactgt tgcaaagt
//
