LOCUS       AP031471                2491 bp    DNA     circular BCT 26-APR-2024
DEFINITION  Staphylococcus capitis NBRC 115779 plasmid pSKB0123-4 DNA, complete
            sequence.
ACCESSION   AP031471
VERSION     AP031471.1
DBLINK      BioProject: PRJDB8042
            BioSample: SAMD00651069
KEYWORDS    .
SOURCE      Staphylococcus capitis
  ORGANISM  Staphylococcus capitis
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus.
REFERENCE   1
  AUTHORS   Miura,T., Ohyama,Y., Furukawa,M., Shimamura,M. and Asami,Y.
  TITLE     Complete genome sequence of Staphylococcus capitis strain NBRC
            115779
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 2491)
  AUTHORS   Miura,T., Ohyama,Y., Furukawa,M., Shimamura,M. and Asami,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-APR-2024) Contact:Takamasa Miura National Institute of
            Technology and Evaluation, Biological Resource Center; 2-5-8
            Kazusakamatari, Kisarazu, Chiba 2920818, Japan URL
            :https://www.nite.go.jp/en/index.html
COMMENT     ##Genome-Assembly-Data-START##
            Assembly Method       :: Unicycler v. 0.4.8
            Genome Coverage       :: 126x
            Sequencing Technology :: Illimina MiSeq; Nanopore MinION
            ##Genome-Assembly-Data-END##
            Annotated by DFAST https://dfast.ddbj.nig.ac.jp/
FEATURES             Location/Qualifiers
     source          1..2491
                     /organism="Staphylococcus capitis"
                     /mol_type="genomic DNA"
                     /strain="NBRC 115779"
                     /isolation_source="skin epidermis"
                     /host="Homo sapiens"
                     /culture_collection="NBRC:115779"
                     /db_xref="taxon:29388"
                     /plasmid="pSKB0123-4"
                     /geo_loc_name="Japan"
                     /collection_date="2019-05-13"
     gene            <1..710
                     /locus_tag="SKB0123_24660"
     misc_feature    <1..710
                     /locus_tag="SKB0123_24660"
                     /inference="COORDINATES: ab initio
                     prediction:MetaGeneAnnotator"
                     /note="partial CDS similar to WP_011117535.1:replication
                     initiation factor domain-containing protein"
     gene            1424..1612
                     /locus_tag="SKB0123_24670"
     CDS             1424..1612
                     /locus_tag="SKB0123_24670"
                     /inference="COORDINATES: ab initio
                     prediction:MetaGeneAnnotator"
                     /inference="similar to AA sequence:RefSeq:WP_001831967.1"
                     /codon_start=1
                     /transl_table=11
                     /product="CsbD family protein"
                     /protein_id="BFL68938.1"
                     /translation="MSEEKFEQAKGNIKETIGDATDNKDLKAEGKGDKASGKAKEVVDD
                     VKDKANDLIDKVKGDKN"
                     /name="CsbD family protein"
     Typing          2..685
                     /name="rep_cluster_1118"
                     /typing="replicon"
                     /tool="MOB-suite"
                     /identity="92.409"
                     /coverage="97.0"
                     /evalue="0.0"
ORIGIN
        1 aaacgaaatt taaagctaaa gcactgcagg aaaaagttta tatcgaatac gacaaagtaa
       61 aagcagatac atgggataga cgtaatatgc gtgttgaatt taatccgaat aaacttacgc
      121 atgaagaaat gctttggtta aaacaaaaca ttatcaacta catggaagat gacggtttta
      181 caagaataga tttagctttt gattttgaag atgatttaag taattattat gcaatgactg
      241 ataaagcagt taagaaaact gtattttatg gtcgtgacgg gaaaccagaa acaaaatatt
      301 ttggcgttcg tgatagtgat agatttatta gaatttataa caaaaaacaa gaacgtaaag
      361 ataacgcaga tgtcgaagtt atgtctgatc acttatggcg tgtagaaatt gaacttaaaa
      421 gagatatggt ggattactgg aatgattgtt ttaatgattt acatatcttg aaaccagatt
      481 ggacttcgcc agaaaaatta aatgaacaag caatggttta catgttaatt catgaagaag
      541 acaaatgggg agaattgaat aaaagaacta aatataaata taaaaattta attaaagaaa
      601 tatctccagt tgatttaacg gaattaatga aatcgacttt aagagaaaat gaaaaacaat
      661 tacaaaagca aatagaattt tggcagacaa aaggtaagaa gctattttaa aaatggctac
      721 catttgactc ccttttagct cccaaatggc tccataaaaa gggagctatt tgggagctat
      781 ttttgatttt atgtagccat ttgggagtca tttttgattt tgggtagcta ttcggtagct
      841 tttgtgtagt cgttcgggag tcatataaca atttttatcg cataaatagg aatcccattt
      901 gacactgtca aatcaatatt ttgcacagaa acggctaccg aatggctaca tacggagaca
      961 tttctgtgta ggattcctct tatgctcttt taaaatattt taaaatataa aagttacatt
     1021 atacacctat ttttttcagg ttttagcttt ttattgagaa ggataattaa aataaaaaaa
     1081 catatttttt tctgaaagtg ttgagaaata aattttaaaa tgatttatag cctctctgtt
     1141 gaacaaaaaa agtttttagt catttttata cgtggaatga ttaaatgtcc tagaaagggc
     1201 ttaaaatgca aaataaaaag actactcatt ttttgagtag tctatctgta ggatagtttt
     1261 tgatattcta aatgaaaagg agtaatacat aaatcatttt gtatacatgg gataatacaa
     1321 ggtttaatgc atgggataaa aaaggatatg atttcacttt taaaaagggt atttgaataa
     1381 tagaattgta ttgtagacat tgattattta ggaggaatag aaaatgagcg aagaaaaatt
     1441 cgaacaagca aaaggaaata tcaaagagac tattggagat gctactgata ataaggattt
     1501 aaaagcagaa ggtaaaggag ataaagcttc tggtaaagcc aaagaagtag tagatgatgt
     1561 taaagataaa gctaatgact tgattgataa agttaaagga gataaaaact aaataaaaat
     1621 taaaacgtct taagtattat tatgtagcat acttgggacg ttttttattt aaagtgaata
     1681 aaaataaata ataagacacg catttatgcc gagaaaattt attgatgttg agaagaaccc
     1741 ttaactaaac ttggagacga atgtcggcat agcgtgagct attaagccga ccattcgaca
     1801 agttttggga ttgttaaggg ttccgaggct caacgtcaat aaagcaattg gaataaagca
     1861 acaaaaggag ttgaagaaaa tgagtgagaa aactaagaaa agcattcgta tagcattatc
     1921 ttttgcacaa gtagtagtac agtcatttat agtttattat gcttacaagc aatataaatt
     1981 atctaaagaa aattaatttt tgattatgta ataagttttg gtactaaaaa agacttgatc
     2041 tgattagacc aagccttttg atagtgttat attaataaac aaataaaaag aagtcgctca
     2101 cccaccgacc aaagtttgtg aacgacaatc caaaaagaaa acatgagttg ttttttatga
     2161 atttgtatat ttaaatacta aacgatattt aaatatacat caagataaat attcgggtgg
     2221 gcgacttctt aaattaaatt aaggagtcga ttttttatga gtagaaaaga gcaagaaatt
     2281 cattcaaagc aaagcacatt acaagaagtt acaaattaca cctcaaccgg atactctaat
     2341 agccggttag gagtgcattc tgtgcaccca caaaatccta aattaagttt tgacgctatg
     2401 acaatagttg gaaatctcag tcgtgacaac gctcaaaagc tatcgtcatt tatgagtatc
     2461 gaaccacaaa ttcgactttg ggatatacta c
//
