LOCUS       AP028572                4678 bp    DNA     circular BCT 26-JUL-2023
DEFINITION  Serratia marcescens QC13 plasmid pQC13_1 DNA, complete sequence.
ACCESSION   AP028572
VERSION     AP028572.1
DBLINK      BioProject: PRJDB10568
            BioSample: SAMD00247386
            Sequence Read Archive: DRR253482, DRR493273
KEYWORDS    .
SOURCE      Serratia marcescens
  ORGANISM  Serratia marcescens
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Yersiniaceae; Serratia.
REFERENCE   1
  AUTHORS   Nagano,D.S., Taniguchi,I., Ono,T., Katsura,K. and Hayashi,T.
  TITLE     Complete genome of Serratia marcescens QC13
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4678)
  AUTHORS   Nagano,D.S., Taniguchi,I., Ono,T., Katsura,K. and Hayashi,T.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JUL-2023) Contact:Debora Satie Nagano Faculty of
            Medical Sciences, Kyushu university, Department of Bacteriology;
            3-1-1 Maidashi, Fukuoka, Fukuoka 812-8482, Japan
COMMENT     ##Genome-Assembly-Data-START##
            Assembly Method       :: Unicycler v. 0.4.8
            Genome Coverage       :: 99x
            Sequencing Technology :: MiSeq; Oxford Nanopore MinION
            ##Genome-Assembly-Data-END##
            Annotated by DFAST v.1.2.0 (https://dfast.nig.ac.jp).
FEATURES             Location/Qualifiers
     source          1..4678
                     /organism="Serratia marcescens"
                     /mol_type="genomic DNA"
                     /strain="QC13"
                     /host="Homo sapiens"
                     /db_xref="taxon:615"
                     /plasmid="pQC13_1"
                     /geo_loc_name="Japan"
                     /collection_date="2012"
     gene            complement(1088..1432)
                     /locus_tag="SMQC13_48100"
     CDS             complement(1088..1432)
                     /locus_tag="SMQC13_48100"
                     /inference="COORDINATES: ab initio
                     prediction:Prodigal:2.6.3"
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="BEO07083.1"
                     /translation="MADKRSKMLTMWVTEDEHRRLLERCEGKQLAAWMRQTCLDEKPAR
                     VGKLPSISPALLRQLAGMGNNLNQIARQVNGSGGTGHDRVQVIAALMAIDAGLERLRHA
                     VLEKGADDDR"
                     /name="hypothetical protein"
     gene            complement(4384..4599)
                     /locus_tag="SMQC13_48110"
     CDS             complement(4384..4599)
                     /locus_tag="SMQC13_48110"
                     /inference="COORDINATES: ab initio
                     prediction:Prodigal:2.6.3"
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="BEO07084.1"
                     /translation="MTELEKQLLSALEQLQQDYSKRLGEWENAFAEWRTMSGLMQRENA
                     ALSERVSSLSRQVQSLSEQLRRLSKG"
                     /name="hypothetical protein"
     Typing          complement(1513..1699)
                     /name="MOB_unknown"
                     /typing="oriT"
                     /tool="MOB-suite"
                     /identity="86.842"
                     /coverage="87.0"
                     /evalue="2.69e-52"
     Typing          1646..2163
                     /name="ColRNAI_rep_cluster_1987"
                     /typing="replicon"
                     /tool="MOB-suite"
                     /identity="89.293"
                     /coverage="99.0"
                     /evalue="0.0"
     Typing          complement(14..1098)
                     /name="MOBP"
                     /typing="relaxase"
                     /tool="MOB-suite"
                     /identity="84.89"
                     /coverage="99.0"
                     /evalue="0.0"
     Typing          complement(4284..4678)
                     /name="MOBP"
                     /typing="relaxase"
                     /tool="MOB-suite"
                     /identity="81.955"
                     /coverage="99.0"
                     /evalue="7.299999999999999e-56"
ORIGIN
        1 cgccccgcgt ccccgcatgt cgacagttgc acaccgctgt tcttctccga cagcatggcc
       61 tgcgtggcct tctgctcccg gagggtctcg tagttgtcga ctatctgctg cccctgccac
      121 cacagcacgc tcccgctcgt ccctatcagc agcaccgaga ccagggtaat cgtgagccac
      181 gtccgcccta ccatacgcag cacgctcagc cggttcgact gcatggcggc gttcatcccc
      241 tgttcgtgag cgctgatagc gttgctgatt cgcttcgcgc tggctttcaa ttccgctttt
      301 acacactgtt cgtgctcgct gaatgcggct ttcagcatct cgccggtact ctgctgctgc
      361 gctttcgatt tctgctctaa gtccttcgcc agcgttaaaa gactgttcat agatggctcc
      421 cttcagtcgg atgtttcgcc ccccgtccgg gtcggcaatg ctgatgctgc ttttcgtcgt
      481 gcgcaccacc tcaaaaccag caagttccag cgcctcagtc acgtcctgac gcgttttcag
      541 ctccccggtc gaggctaacg ccagtaaacc ccgcgtaatc gcctgagcgg cttcctgctt
      601 cgcttccggc agcgcggacg gcgtcaccag cgcacgccgg ttttccggcg cgttcggatc
      661 gtgcagcccc agcctgccgt tcacgatcgt ctgccaggca tcgatgcgcg gacggtcggc
      721 ccggtcgtaa tacggctgga gccgtttgcc ggtcagcagc tccgtgttcg ggatcaggaa
      781 attcagctcc agccgccctt tgtcctggtg ctcaacccac agcacgctgt actggtcttt
      841 atcgagtccg ggcatcagaa cccgctcgaa gctcgccatc agtttttcac gctgacccgg
      901 tggtaagtcc tgctcggcaa acgacagcac cccggaggtg tattttttgg catagggcga
      961 ggcgtcgata agctcccgga cttcttccgg cttcccctgc agaacgctgg cgccttcgcg
     1021 ctgccgatct ttccccagca gataatccac cggacccgct ccgcccccgc gccctcgcgg
     1081 gtgaaactta acgatcatcg tctgccccct tttccagcac cgcgtgccgc agccgctcga
     1141 gtccggcatc gatggccatc agcgcggcga taacctgcac ccggtcatgt ccggtaccgc
     1201 cactcccgtt aacctgccgg gcaatctggt tgaggttgtt ccccatgccg gcaagctgac
     1261 gaagcagcgc cggcgagatc gacggaagtt tgccgacacg cgctggcttc tcgtccaggc
     1321 acgtctggcg catccaggct gcgagctgtt taccctcgca gcgctccagc agacgccggt
     1381 gctcatcttc cgttacccac atcgtgagca tcttgctgcg tttatctgcc aatccagcct
     1441 cctgataacg ccgggacggg cgggaaatgc tttcccgggc ggcgcggtgt tggacaagcc
     1501 gcaggcgcgt cagtggtttt agcgggtttc ggggcgcagc cctgaaccag tcacgtagcg
     1561 ctagcggagt gtatactggc ttaatatggt aaatcgaggt ggtaattagg ggaagtgctt
     1621 catgtgacag ggttaaaatg cagctgcggg gcgtaagtgc aaaatgcagg aaccgatgaa
     1681 attacgcctc ctcgctcact cggtcgctac gctcctgccg tgagactgcg gcgggcgtta
     1741 ccggcgcaca tataacgagg taaatggata acggaacaat caggagaggc agggaaaagg
     1801 atgcggcgtt gccgtttttc cataggctcc gcccccctga caagcatcac gaaatctgac
     1861 gctcaaatca gtggcggcga aacccgacag gactataaag atcccaggcg tttccccctg
     1921 gtagctccct cgtgcgctct cctgttcctg cctttcggtt taccggtgtc attccgctgt
     1981 tatggccgcg tttgtctcat tccacgcctg acactcagtt ccgggtaggc agttcgctcc
     2041 aagctggact gtatgcacga accccccgtt cagtccgacc gctgcgcctt atccggtaac
     2101 tatcaacttg agtccaatcc ggaaagacac gacaaagcgc cactggcagc agccattggt
     2161 aacaggttta gaggaggaga gtcttgaagt ttcgggtgcg ataaggctac actgaaagga
     2221 cagttttggt gactgtgctc ctccaagcca gttaccgcgg ttcaaaagag cgtcaactct
     2281 tgcgaacctt cgaaaaagcc accttgccgg gtggtttttt cgttttcaca gcaagagatt
     2341 acgacgaggg taaacgaatc tcaagggatc attcatccga acaagagatc attcgaaatt
     2401 ttgggggagt tgcatagggt catgataccc aagctctaac agttttatat ggttcggcgc
     2461 tagacgttga aagtggatga cccaatcaga gactttgtac ttcccgtgaa atgtatcgat
     2521 gaaaacggga tcgcctatat gggcatgcca caatttatta gccctggcat gttcttcaat
     2581 agcttctttg ttttcgtaac tgtcaggcac tttccaagat ggcgatacct tgccaatcca
     2641 agccggatgg ccttttaagg catcgccaaa aagattgtac ttctcgaagt gttcgatgaa
     2701 atcatcgatt ttatcgagtg ttttttgaga aaagcgggat gtgtaataaa gattgaatgt
     2761 ctcagagaaa gagacaacat tcaattgtag attttgcgtg cttgatccgc tgcccatgcc
     2821 cttctctgct ccctacttag accagatggc attgtaacag atctctcatt cgctctggaa
     2881 atcaacagag acaaggatac accaaatatt tcagtatctt ttacaagatc atgattttgt
     2941 ttggttttca tatcactaac tccgtattta atgcagatag aaatgttttt ctattctcag
     3001 attagccttt tataattgtg taataatggc gctggtgtca ccctattcat atgaatatcc
     3061 gtattatata tctctcaaaa aaaacattta caggacaatc aatgagttac acgatagaga
     3121 aaaaatggaa ggctggaggt ctgtcattag ggtggacggc ggtgcctact gtgttgtttt
     3181 ttatacaaaa tgagaagaaa ttgagccctg tagcattcaa taccttgctg aatctcatag
     3241 tacactggtg gaatttacag gagtggccgc atccatcaat ggagagccta gctatacgga
     3301 tgggggtttc agtaaggaca gtgcaaaggg ctattaatga cctagaaaaa gctaatctct
     3361 tagataaaaa accgacatca aaaagcgaca accgatatgg tggccgcaac atatacgacc
     3421 ttacaaagct tgtagattat ttagacataa ttggtccttc tgtgtccgag caagtaagaa
     3481 agccgcgaca caaaaagcca atatatacag taaggaaaaa agccgattag ttatgttggt
     3541 tacatgcagg aacagcccgc atttggatgc cgggcttatc gttaaattag ggctgaatcg
     3601 taagaccaga acgttgaatg tattcatcaa cgcgatcgcc aatgtttaca attttggcaa
     3661 aattcacatc tgccgatgac acgtttagat cagttgcgga tgcaggcata ggcaaggttg
     3721 cacgatgacc atcgacggaa accaaggttt ttctatcaac aaacgaagaa ccatagttaa
     3781 cggtgtactc gactgaacac gcattactat caggatgacg aacagcccaa ggctcattaa
     3841 acgagttgta gtcgtcgtaa tcagctctct taatgtgcag ttctaaatca tttttataag
     3901 taaacgatcc tgtctcatca tccacaatcc aatcatcttg actcgattgc gcaagaattt
     3961 ttgttacttc atcagcattc atgaatagct ccatcaagca gtgtgtagat aaaaaatcaa
     4021 acaacatcac ctacatgggt attctcggaa catttatcaa tggacggtta atttaccata
     4081 acatctcttc cgcgcaccgc taaaaacgac tcgcggcgtt tccggtgtct acaggatgaa
     4141 acggagagga aataccccag aaaaccaccg gaaacgcgcc tgataaagtt tagcctgatg
     4201 catacctatg cagccaggtg aatgcgcacc ggttacgcag aaaacagggt atcaaagccc
     4261 tgttttcgtc acttcacagc tccatcgtcg gcccttgccg ctgtttctgc cttgagcgtt
     4321 ccagctccag cgttttctgg tgctgcaccg cgcgctcctg ctgccggtgt gcctcaatcg
     4381 cgctcagcct ttcgacaacc ggcgcagctg ctcgctcaaa ctctgcacct gcctgctcaa
     4441 actcgatacg cgctcgctca gcgccgcgtt ctcccgttgc ataagaccag acatcgtccg
     4501 ccattccgcg aaggcgttct cccactcgcc cagccttttc gagtagtcct gctgtagctg
     4561 ctctaatgcg ctcagcaact gtttttccag ctccgtcatg tgctatttcc ccgccagtat
     4621 catccagctc gaatcctcgc cgtatcgtcc cgcctccgtg ttcaccttca cgcagcgt
//
