LOCUS       AP028568                4938 bp    DNA     circular BCT 26-JUL-2023
DEFINITION  Serratia marcescens QC11 plasmid pQC11_7 DNA, complete sequence.
ACCESSION   AP028568
VERSION     AP028568.1
DBLINK      BioProject: PRJDB10568
            BioSample: SAMD00247384
            Sequence Read Archive: DRR253480, DRR493272
KEYWORDS    .
SOURCE      Serratia marcescens
  ORGANISM  Serratia marcescens
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Yersiniaceae; Serratia.
REFERENCE   1
  AUTHORS   Nagano,D.S., Taniguchi,I., Ono,T., Katsura,K. and Hayashi,T.
  TITLE     Complete genome of Serratia marcescens QC11
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4938)
  AUTHORS   Nagano,D.S., Taniguchi,I., Ono,T., Katsura,K. and Hayashi,T.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JUL-2023) Contact:Debora Satie Nagano Faculty of
            Medical Sciences, Kyushu university, Department of Bacteriology;
            3-1-1 Maidashi, Fukuoka, Fukuoka 812-8482, Japan
COMMENT     ##Genome-Assembly-Data-START##
            Assembly Method       :: Unicycler v. 0.4.8
            Genome Coverage       :: 223x
            Sequencing Technology :: MiSeq; Oxford Nanopore MinION
            ##Genome-Assembly-Data-END##
            Annotated by DFAST v.1.2.0 (https://dfast.nig.ac.jp).
FEATURES             Location/Qualifiers
     source          1..4938
                     /organism="Serratia marcescens"
                     /mol_type="genomic DNA"
                     /strain="QC11"
                     /host="Homo sapiens"
                     /db_xref="taxon:615"
                     /plasmid="pQC11_7"
                     /geo_loc_name="Japan"
                     /collection_date="2011"
     gene            complement(1463..2035)
                     /locus_tag="SMQC11_55500"
     CDS             complement(1463..2035)
                     /locus_tag="SMQC11_55500"
                     /inference="COORDINATES: ab initio
                     prediction:Prodigal:2.6.3"
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="BEO02262.1"
                     /translation="MWQEKNAAAERQQNMRYRIYSASSLTDSLRSVVRLRRAVPAYRRG
                     GNFLGDARKKLNREAIRPRRSRFSIGSAPLTSITKSDAQISGGETRQDYKDTRRFPLVA
                     PSCALLFLPFGLPVSFRCYGRVCLIPRLTLSSGKAVRSKLDCMHEPPVQSDRCALSGNY
                     QLESNPEKHDKAPLAAATGNRFRGGES"
                     /name="hypothetical protein"
     gene            2247..2570
                     /locus_tag="SMQC11_55510"
     CDS             2247..2570
                     /locus_tag="SMQC11_55510"
                     /inference="COORDINATES: ab initio
                     prediction:Prodigal:2.6.3"
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="BEO02263.1"
                     /translation="MLTMWVTEDEHRRLLERCDGRQLAAWMRQTCLDEKPARTAKLPSI
                     SPALLRQLAGMGNNLNQIARRVNAGVGTGHDRVQIVAALMAIDAGLERLRHAVLEKGTD
                     DDR"
                     /name="hypothetical protein"
     gene            3248..3739
                     /locus_tag="SMQC11_55520"
     CDS             3248..3739
                     /locus_tag="SMQC11_55520"
                     /inference="COORDINATES: ab initio
                     prediction:Prodigal:2.6.3"
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="BEO02264.1"
                     /translation="MSSLLTLAKDLEQQSKAQQKSTGEMLKAAFSEHEQSVRAELNASA
                     RRISDAISAHEQSMSEAMEKNRRSVLLTAGRTWLTILMVSALLIATSGSILWWQGRQIT
                     DNYTHLRQQEDTLAKMTARTWGVRYQESNDGRRFLILPPGMQAEAIPYDGTTWIRLKQE
                     "
                     /name="hypothetical protein"
     gene            3746..3961
                     /locus_tag="SMQC11_55530"
     CDS             3746..3961
                     /locus_tag="SMQC11_55530"
                     /inference="COORDINATES: ab initio
                     prediction:Prodigal:2.6.3"
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="BEO02265.1"
                     /translation="MTELEKQLLSALEQLQQDYSQRLDEWESAFAEWRSMCGLMQRENA
                     VLNERVSDLSTQVLSLSEQLRRLSGN"
                     /name="hypothetical protein"
     gene            4149..4268
                     /locus_tag="SMQC11_55540"
     CDS             4149..4268
                     /locus_tag="SMQC11_55540"
                     /inference="COORDINATES: ab initio
                     prediction:Prodigal:2.6.3"
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="BEO02266.1"
                     /translation="MKILNVIEALLNCFYLVMELCELPERHLPVFKAFALILV"
                     /name="hypothetical protein"
     Typing          1960..2132
                     /name="MOBP"
                     /typing="oriT"
                     /tool="MOB-suite"
                     /identity="100.0"
                     /coverage="100.0"
                     /evalue="9.14e-86"
     Typing          complement(1489..2035)
                     /name="rep_cluster_2335"
                     /typing="replicon"
                     /tool="MOB-suite"
                     /identity="94.545"
                     /coverage="90.0"
                     /evalue="0.0"
     Typing          2248..2564
                     /name="MOBP"
                     /typing="relaxase"
                     /tool="MOB-suite"
                     /identity="91.509"
                     /coverage="99.0"
                     /evalue="3.03e-59"
     Typing          2561..4062
                     /name="MOBP"
                     /typing="relaxase"
                     /tool="MOB-suite"
                     /identity="83.692"
                     /coverage="100.0"
                     /evalue="0.0"
ORIGIN
        1 gtcagaataa gcctgtcatt gagttcagtc cggagggggt gataaataaa gccagcccgc
       61 tttttctctc cactatgggg tacagggctg atgaaataat cggtcaccac catcgtatat
      121 tctgcccgcc ctcgctggta agttcaccgg aatacagcca gttctggcag cgccttgcca
      181 ggggagaaag ctttagtggc aagtacctgc ggctggcaaa gggaaatcgt tccgtatggc
      241 ttgaagccag ttatatcccc gtttctgaca ggcgcggccg tgttatcaga gtcattaaaa
      301 ttgctgccga tatttctgag cgcgtgcatt ctgctcttga gcaggaagca gtcgtaaatg
      361 ccataaaccg ttctatggcc atcatcacct tcaatcctga agggatcgtg cttgaagcaa
      421 atgaaaattt cgtcaatgcc actggctata agcgggatga aatcataggt aagcatcatc
      481 gtctgttctg tgccgagacg ctttacaaaa gtgatgaata ccgacatttc tgggagagtc
      541 tgaatcaagg tgagtttttt tctggtctgt ttccacgcct taaccgtcag ggagaccctc
      601 tgtggttccg tgcaacttat aaccctgtct ttaacagtga tgggcagctt tataaaattg
      661 tgaaattcgc tacagatgtt acggctgatg tcctgcgaaa ccagagagag caagaggctg
      721 ctgtgcatgc atgggatatg gccgtgcaga cccgagaaag tgcgcagaac ggtgccaatg
      781 ttattgaaaa tagcatcctt atgattgaca gaattgcgca ggggatgggg gctgtctcca
      841 ccgatatctc acggctcaac aatcagtctg aaagtattga cgatatggtg gaaaccatcc
      901 ggaagtttgc catgcagaca agacttattg cactgaatgc cgcgattgaa gcagcaaggg
      961 ctggcgcatc cggaagaagt tttgcggttg ttgccgcaga agtgcgtaat cttgcggcga
     1021 gcgtcagtag cgcgactgaa gaaattgagc aagtcgtggc cagcaatagt caactggcca
     1081 aggatgttct ctgtggcatt gaaaacagcc tgatgaacac tcgggaaggg gttacactca
     1141 tgcgcgaagc gggtgaagtt atgaccagca ttcagaggaa tgctgcaggg gttgagactg
     1201 cggttaagga tgtcgccatt tcagttaaag ccggataggc catggtgcat atccccatat
     1261 ctgtcgaaca tcacagatga tcttcttgag atcctttccg ttgcgtcgta atctcttgct
     1321 ctgaaaacga aaaaaccacc cggcaaggtg gctttttcga aggttcgcaa gagttgacgc
     1381 tcttttgaac cgcggtaact ggcttggagg agcacagtca ccaaaactgt cctttcagtg
     1441 tagccttatc gcacccgaaa cttcaagact ctcctcctct aaacctgtta ccagtggctg
     1501 ctgccagtgg cgctttgtcg tgtttttccg gattggactc aagttgatag ttaccggata
     1561 aggcgcagcg gtcggactga acggggggtt cgtgcataca gtccagcttg gagcgaactg
     1621 ccttcccgga actgagtgtc aggcgtggaa tgagacaaac gcggccataa cagcggaatg
     1681 acaccggtaa accgaaaggc aggaacagga gagcgcacga gggagccacc agggggaaac
     1741 gcctggtatc tttatagtcc tgtcgggttt cgccaccact gatttgagcg tcagatttcg
     1801 tgatgcttgt caggggggcg gagcctatgg aaaaacggct tcgccgcggc cttatcgctt
     1861 ccctgttaag cttctttctg gcatctccca ggaaatttcc gccccgcctg taagccggta
     1921 ccgctcgccg cagccgaacg accgagcgca gcgagtcagt gagcgaggaa gcggaatata
     1981 tcctgtatcg catattctgc tgacgctccg ctgctgcatt tttctcctgc cacatgaagc
     2041 acttcactga tattcgcatc cgtgccaaca tagtaagcca gtatacactc cgctagcgct
     2101 acgtgactgg ttcagggctg cgccccgaaa cccgctaaca gccactgacg cgcctgcggc
     2161 ttgtccaacc ccgcgccgac cgggaaaggt tttcccgccc gtcccggggt tatcaggaga
     2221 ctgttttgtc agagaaacgg aacaagatgc tcaccatgtg ggtgacggag gatgagcaca
     2281 ggcggctact tgagcgctgc gacggcaggc agctggcggc gtggatgcgg cagacctgcc
     2341 tggacgaaaa gccggctcgt accgcaaaac ttccttcgat ctcgccggcg ctgctgcgcc
     2401 agcttgccgg tatgggcaac aacctgaacc agatagcccg ccgtgttaac gccggcgtcg
     2461 gtaccggtca tgaccgggtg cagattgtgg cggcgctgat ggccatcgat gccgggcttg
     2521 agcggctgcg gcacgccgtt cttgagaaag gaacggacga tgatcgttaa atttcatcca
     2581 cgcggtcgcg gcggtggcgc cgggccggtg gactatctgc tgggtaaaga ccggcagcgt
     2641 gaaggcgcca gcgtcctgca ggggaagccg gaagaagtcc gggagctgat cgacgcgtcg
     2701 ccttacgtga agaaatacac ctccggcgtc ctgtcgtttg cggaggccga tctgcctccc
     2761 ggccagcggg aaaaactgat ggccagcttc gagcgggttc tgatgcccgg acttgataaa
     2821 gatcagtaca gcattctgtg ggtggagcac gaggacaagg ggcgtctgga gctgaacttt
     2881 ctgatcccca ataccgagct gctgaccggc aggcggctcc agccgtacta cgaccgcgcc
     2941 gaccggccgc gtatcgatgc ctggcagacc atcgtgaacg gcagactggg gctgcacgat
     3001 ccgaacgcgc cggaaaaccg ccgggcgctg gtcacgccgg ccggactgcc gaaaacgaag
     3061 caggaagccg cagaagccat cacccgtgga ctgctgagct tagcctcgtc cggggagctg
     3121 aaaagccgtc aggacgtcac tgaggctctt gaaggtgcag gttttgaggt ggtgcgtaca
     3181 acgaaaagca gtatcagcat tgccgaccct gacggggggc gaaacatccg actgaaggga
     3241 gccatctatg agcagtcttt taacgctggc gaaggactta gagcagcaat cgaaagcgca
     3301 gcagaagagt accggcgaga tgctgaaagc cgcattcagc gagcacgagc agtctgtcag
     3361 agcggaactg aacgcaagcg cgaggagaat cagcgacgcc atcagcgccc acgagcagag
     3421 tatgagcgag gcgatggaga aaaaccggcg gagcgtgttg ctgacggccg ggaggacatg
     3481 gctcaccatc ctgatggtgt cagcgctgct gatcgccacg agcgggagca ttctgtggtg
     3541 gcagggacgg cagataaccg acaattacac acatcttcgt cagcaggaag ataccctggc
     3601 gaaaatgacc gcccggacgt ggggagtacg ctatcaggag agcaacgacg gccggaggtt
     3661 ccttatcctg ccgccgggga tgcaagccga agccatcccc tacgacggga cgacctggat
     3721 ccgcctgaaa caggagtagc ggaaaatgac agagctggaa aagcagttgc tgagcgcatt
     3781 agagcagcta cagcaggact actcgcaaag gctggacgaa tgggagagcg ccttcgcgga
     3841 atggcggagc atgtgtggac ttatgcaacg ggagaacgcg gtgctgaacg agcgcgtgtc
     3901 ggacttgagc acgcaggtgc tgagtttaag cgagcagctg cgccgcttgt ccgggaactg
     3961 aatgccatcg aggagaaggc tgcactggag tatcagcgtc agaacgagct ggagctgacg
     4021 ctccgacaga agcagaagag tttcgatggt ccgaagatga ggtgacagcc cgcacgaaga
     4081 agggctcatc gcgttcctgc taaataggct gactaccgga atggtagtga cttatcccgg
     4141 aggaagtgat gaaaattctc aacgttattg aagccctgct gaactgtttt tacctggtga
     4201 tggagctgtg tgagttgccg gagaggcatt tgccggtttt taaggcgttc gcgctgattt
     4261 tagtgtgact ttacgctgca tgcatctggc tgcatgacta tgcatcagtg taatatccag
     4321 cggctgcgtt tttggtgttt tttcgtcatg tctgtcgcca ctttctcgcg tctggcaccg
     4381 gaaacgcagc caaccccgtt tctgcggtgc gggcaagggg tgttatgtta aaagccgagg
     4441 tctggcggat acggaaaaaa ttatgccggc cgggcttatg cccgcggcaa tccggccgat
     4501 acttaaatta tccttcacaa aggatgtgct gcgatccagg cagttgagtg ttttccggct
     4561 cccggatgtg agccattttt ttgccttctg atgcctgtta atgcatgcgg agctgcgctg
     4621 gttcttccaa gattgataga cgccagcttc tctgctggag ccggcggatt tgccgtaaat
     4681 atgaacattt tcttattgtt cagcccgcta aagatggcgg gttttttacg cgtgaaatcc
     4741 ggagccggac atcatgccgg catggctgaa gagcgggctt tttcccgccc tgtcgcagta
     4801 atatataacg ctacataagg agtagccgat aaccatggca gtacttacat tatccgggca
     4861 atctgattca tatgttttca cttaaaaata tgttctccct gaacctccag cgatcagcca
     4921 tttcgtatga cgcaattt
//
