LOCUS       AP028567                5111 bp    DNA     circular BCT 26-JUL-2023
DEFINITION  Serratia marcescens QC11 plasmid pQC11_6 DNA, complete sequence.
ACCESSION   AP028567
VERSION     AP028567.1
DBLINK      BioProject: PRJDB10568
            BioSample: SAMD00247384
            Sequence Read Archive: DRR253480, DRR493272
KEYWORDS    .
SOURCE      Serratia marcescens
  ORGANISM  Serratia marcescens
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Yersiniaceae; Serratia.
REFERENCE   1
  AUTHORS   Nagano,D.S., Taniguchi,I., Ono,T., Katsura,K. and Hayashi,T.
  TITLE     Complete genome of Serratia marcescens QC11
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5111)
  AUTHORS   Nagano,D.S., Taniguchi,I., Ono,T., Katsura,K. and Hayashi,T.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JUL-2023) Contact:Debora Satie Nagano Faculty of
            Medical Sciences, Kyushu university, Department of Bacteriology;
            3-1-1 Maidashi, Fukuoka, Fukuoka 812-8482, Japan
COMMENT     ##Genome-Assembly-Data-START##
            Assembly Method       :: Unicycler v. 0.4.8
            Genome Coverage       :: 223x
            Sequencing Technology :: MiSeq; Oxford Nanopore MinION
            ##Genome-Assembly-Data-END##
            Annotated by DFAST v.1.2.0 (https://dfast.nig.ac.jp).
FEATURES             Location/Qualifiers
     source          1..5111
                     /organism="Serratia marcescens"
                     /mol_type="genomic DNA"
                     /strain="QC11"
                     /host="Homo sapiens"
                     /db_xref="taxon:615"
                     /plasmid="pQC11_6"
                     /geo_loc_name="Japan"
                     /collection_date="2011"
     gene            complement(125..1207)
                     /locus_tag="SMQC11_55450"
     CDS             complement(125..1207)
                     /locus_tag="SMQC11_55450"
                     /inference="COORDINATES: ab initio
                     prediction:Prodigal:2.6.3"
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="BEO02257.1"
                     /translation="MAIFHLSFKVLTRTTKTGKSKSSLYLAAYNSREKLKDELTGLTFD
                     YTKKNDLYKSGIILPEEAPRSFYDRKTLWQNCELSEKRKDSQICRYAIISLPEELNGEQ
                     NEALLKKYLKENFVKKGMCVDYAIHDINKKPHAHVMLTMRKCENGGFSKKKAREWNDPK
                     LAEVWRRQWSVLVNKTLRENGHKNTITHLSFLRQKELAIAKAREALENNDIKKAEELTT
                     LAKHLATKKPVKRKPTVKFLKDKARKKNINPELRQRLRQQKEQKEETNKKENKLNLIFK
                     NLILRCKRSKKTEITKMTEADFLKNMKTDEKEAEDLELNKYIDKELENELNKKNDITHT
                     PTRDRIGNRKKKDNKPQGRK"
                     /name="hypothetical protein"
     gene            1586..1954
                     /locus_tag="SMQC11_55460"
     CDS             1586..1954
                     /locus_tag="SMQC11_55460"
                     /inference="COORDINATES: ab initio
                     prediction:Prodigal:2.6.3"
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="BEO02258.1"
                     /translation="MEKTEIDILAEELKEFYFDALGENNGRVFAYRATYKVKGWEQIEQ
                     KAFRNAFFKFFKTDAQLRKTKDIKSDYFQLEGIKDKFNRYYFPSFCVDKKEYEARGAEY
                     LKEVEEYFKKIITLAAIK"
                     /name="hypothetical protein"
     gene            2074..2370
                     /locus_tag="SMQC11_55470"
     CDS             2074..2370
                     /locus_tag="SMQC11_55470"
                     /inference="COORDINATES: ab initio
                     prediction:Prodigal:2.6.3"
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="BEO02259.1"
                     /translation="MSLQQQKERLKRELAALEKKEKHLKDQANAKNMKAIAAEILKYDL
                     EGYDNFKKVVGLLAYFDYQDDDFKNGLMKWAENELEERKAKKVARTFKKKPQK"
                     /name="hypothetical protein"
     gene            2392..2937
                     /locus_tag="SMQC11_55480"
     CDS             2392..2937
                     /locus_tag="SMQC11_55480"
                     /inference="COORDINATES: ab initio
                     prediction:Prodigal:2.6.3"
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="BEO02260.1"
                     /translation="MDNLTLLDMFKHGTATWSAVSSFVVVLFWCVGCWLAFLAIVNYKN
                     AADGKSGIAKPIVQTVIASLMVAISRFIPILSDTLNNKAAEFSPQSLLSDIPTTDPMGL
                     GLAFTSVLLFVQMLGTIAVFRGFLMLWEATNKGAGSGLIGKSWTHIIGGVLAVNIQLTI
                     ATVAATFYPGVDLSFLGL"
                     /name="hypothetical protein"
     gene            3617..5098
                     /locus_tag="SMQC11_55490"
     CDS             3617..5098
                     /locus_tag="SMQC11_55490"
                     /inference="COORDINATES: ab initio
                     prediction:Prodigal:2.6.3"
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="BEO02261.1"
                     /translation="MLYENNKAYGDIVNTGEVPFLTTYASQNGDRLNERKGKSIRLAKL
                     YYLQADTMEGNNAEAMRKRAGRVFACCSHRELAIGAGGYAYNLHTHRCRDRNCTECQRV
                     RAFVLQQKVREITPSLIEKTSAHDGLIFGTLTVKNPPITELKDYLKILSKAFARMLRRK
                     EFARIAVGGFRCFEVTRGESGQDFCHPHIHFLLQVKASYFSRNSDLYINGDKWAEAWTD
                     CLRLEVEKTGRIFNVSDYPNGKAFVKILRVQAPNYTRENRKYATIETLQKEGDQVINYV
                     LKYTAKEDEGTKKALVRNDAWFFEYDKQIKNIRAIAFFGIYKTLIGELEPKEYDEHAIK
                     TDLNNNQARFYSAIWDDDHKYLAIETTEEEALNKKRTNIINSIRTTLTSQLQSKNYILD
                     IMIAALNKGDFLTVNEEVNNHNNLAERLYKTFKRMEKAGELIERHDGFYQHFHKYTFKS
                     VIYEKMESILTAEELENIKKEIELNIEVIEDNPPF"
                     /name="hypothetical protein"
     Typing          complement(144..1207)
                     /name="MOBQ"
                     /typing="relaxase"
                     /tool="MOB-suite"
                     /identity="89.296"
                     /coverage="99.0"
                     /evalue="1.98e-169"
ORIGIN
        1 gccccatata tggggctttc attacctgtt attttttatc tgtttagcgt tatattcttc
       61 ttcttttttg ttttttaatt cttcttctgg atctcttaat gtcatttcaa taatccatct
      121 tttattattt tcgtccctgt ggcttattat cctttttctt cctgtttcca attcgatccc
      181 tcgtgggtgt gtgtgtaatg tcatttttct tattaagctc attctctaac tccttatcta
      241 tatatttatt taattctaaa tcctcggcct ctttttcgtc tgttttcata ttttttaaaa
      301 aatcggcttc tgtcattttt gttatttctg tttttttgct tctcttacat cttaatatta
      361 aatttttaaa aatcaaattt aatttgtttt cttttttatt tgtttcttct ttttgttctt
      421 tttgctgcct gagcctttgg cgcaactctg gatttatatt ttttttccgc gctttgtctt
      481 ttaaaaattt aaccgtaggt ttacgtttta ctggtttttt agttgccaag tgtttagcta
      541 acgttgttag ttcttccgct tttttaatat cgttattttc taaggcttcg cgggcttttg
      601 ctattgccag ctctttttgc cgtaaaaaac ttaaatgtgt tattgtgttt ttgtgtccgt
      661 tttctcttag tgttttattt accaaaaccg accactgtct acgccaaact tccgctaatt
      721 tcggatcatt ccattctcgc gccttttttt tgctaaatcc tccattttca cattttcgca
      781 tcgtcagcat tacgtgagca tggggttttt tatttatatc gtgaatggca taatctacac
      841 acattccttt tttaacaaaa ttctccttta aatatttttt taataatgcc tcgttttgct
      901 ctccgtttaa ttcctctggc aaggagatga tggcatatct acatatttgc gaatccttgc
      961 gtttttctga caactcacaa ttttgccata atgttttacg atcataaaaa gagcggggcg
     1021 cttcttccgg taaaataata ccacttttat ataaatcgtt ttttttcgta tagtcaaaag
     1081 ttaaacctgt taactcgtct tttaatttct ctctactgtt ataagcagct aaatatagcg
     1141 agcttttgct tttgcctgtt tttgttgtac gcgttaatac tttaaagctt aaatgaaata
     1201 ttgccacggc tggcctcctt ttgtttttgt ttttttatgc ccacacacac ggaaggggag
     1261 ggagggcata ggcggggggc aacctttgcg aagcattgtg aagccttgcg ccgtgcggtg
     1321 cgctggtaag cctccgcagg ttgcgaagca accagggcga agccctcaag cctcgcagag
     1381 accgcacgtt ccccgaaggg gaatgtataa gcgggcattt atcactaacg ttctaaatgt
     1441 ggcttacttt gtgcgcagct accgcctttt ttattattta ataaaacctt ttaaaaaaaa
     1501 gtaaataaaa ccaattaaaa atttgacatt tattttttat atattaaaga aaaaatataa
     1561 aagaaaaaaa agaggggttt aaattatgga aaaaacagaa attgatatat tggcagaaga
     1621 attgaaagaa ttttattttg atgcgctggg tgaaaataac ggtcgtgttt ttgcttatcg
     1681 agcaacctat aaagtgaaag ggtgggagca aatagaacaa aaagctttta gaaatgcgtt
     1741 ttttaaattt ttcaaaacag atgcgcaatt aaggaaaacc aaagatataa aaagcgatta
     1801 tttccaactg gaaggcataa aggataaatt taatagatat tattttcctt cattttgcgt
     1861 tgataaaaaa gaatatgaag caagaggtgc tgaatattta aaagaggttg aggaatactt
     1921 taaaaaaata ataactttgg cggctataaa atgattataa cttttattat aaatattatc
     1981 gttattattt cattatctac gctttacatc gtaaggcgta gggaagaact aaaaaaaaag
     2041 aaaaagtaaa cattataaaa ataagggggc tatatgagct tacaacaaca aaaagagaga
     2101 ttaaaaagag aactcgcggc gttagagaaa aaagaaaagc acttaaaaga tcaggcgaac
     2161 gctaaaaata tgaaagcaat tgcggcagaa attttaaaat atgatcttga aggatacgac
     2221 aattttaaaa aagtcgtcgg tttgttagca tattttgatt atcaagacga cgattttaaa
     2281 aacggcttga tgaaatgggc tgagaatgaa cttgaagaaa gaaaagctaa aaaagtagct
     2341 cggacattta aaaaaaaacc tcaaaaataa taaataatga gggggttaat aatggataat
     2401 ttaacccttt tagatatgtt caaacacgga accgctacct ggtcagcggt ttcgtctttt
     2461 gtcgttgtgc ttttctggtg tgttggctgt tggctggcat ttttggcgat tgttaattat
     2521 aaaaacgcag ctgatggaaa aagcggaatc gcaaagccaa ttgttcaaac tgtgatcgcg
     2581 tctttgatgg tcgcaatttc tcgatttatt ccaattcttt cagacacttt aaacaataaa
     2641 gcggctgagt tttcacctca gagcttactt agtgatattc caaccactga tccaatggga
     2701 ttggggctgg cgttcacaag cgttttatta tttgtgcaaa tgttgggcac aattgccgtt
     2761 tttcgtggct ttttgatgct gtgggaggca acgaacaagg gcgcaggtag tgggcttata
     2821 ggcaagagct ggacgcacat catcggcggc gttcttgccg taaacataca gctaacgatt
     2881 gccacggtag ccgctacgtt ttacccaggc gttgatctgt cgtttttggg tctttgagtg
     2941 taagccagtc aagggcaagc cgtaggcttg gcgtagcgaa ccctttacgg gctggaacga
     3001 ccccaccctc ggcaaagggg gaaagctggc catcggctgg ctttcctcct gttaagccgc
     3061 ccttttgccc tttttgttta tcctccctta cgctggatca ggcagcgcag gggtttttgt
     3121 cttttagccc cctctggggg ttgggggttt aaaaatccgt tcaggatttc gctttttggt
     3181 ttttgtcttt taagccccag cggggcgctc tcaacttgat tattaagaaa taaatcgcac
     3241 gaattttggg gggtaaatcg ggctacaagc cgcgccattg ctggatttct ttgttttttt
     3301 aattacatac caaaacggaa aaaagcgcaa aatttataca gggcaaggag gggctaaaag
     3361 aaacgataaa cgggcaacat aaagcgataa ggggtaaacc tgggacggct ctacattttt
     3421 aacactaaat agggggtgtt tttgggacgg catacattaa agcagttaaa aaacgggcta
     3481 taaatgggac gggatcaacc gttaggggga tttgcgcggg tgtttttgtt tatggcgatt
     3541 ttttaagcat ttgacaaaaa agaaaaatcc cgtaactttt gagttgcgag ctacaaaaga
     3601 aaacgggatt aatcagatgc tttatgaaaa taataaagca tatggggata ttgtcaacac
     3661 tggcgaagtg ccatttttaa ccacatatgc gagccaaaac ggcgacagac taaacgaacg
     3721 aaaaggcaag agcataaggc ttgccaagct ctactacctc caggccgaca ctatggaagg
     3781 caacaacgca gaagcgatgc gaaaacgtgc ggggcgggtg tttgcttgtt gttctcatcg
     3841 tgagctggct atcggagccg gtggttatgc ttacaacctt cacactcata gatgtagaga
     3901 ccgaaactgt acagaatgtc agcgcgtgcg ggcttttgtc ttacagcaaa aagtgcgaga
     3961 gattacgccc tcacttatcg aaaaaaccag cgcacatgat gggttgattt ttggaacgct
     4021 tacagtaaaa aacccaccga taacagagct taaagattac ttaaaaattt taagcaaagc
     4081 ttttgcgcga atgttgagac gcaaagagtt tgcgcgcatt gccgttggtg gttttagatg
     4141 ttttgaagtg acgcggggcg agtccgggca agatttttgt catccgcaca tccatttttt
     4201 actacaagtt aaagcgtctt atttttcgag aaattccgat ttatatatta atggtgataa
     4261 atgggcggaa gcctggacag attgcttgcg ccttgaagta gaaaaaacgg ggcgaatttt
     4321 taacgtctct gactatccga acggcaaggc gtttgtaaaa attttgcgcg ttcaagctcc
     4381 taattacaca agagaaaaca ggaaatatgc gacgatcgaa acattacaaa aagaaggcga
     4441 tcaggtcatt aattacgttt taaaatatac cgcaaaagaa gacgagggaa caaaaaaagc
     4501 gcttgttcgc aatgatgcgt ggtttttcga atatgacaag caaatcaaga acataagagc
     4561 gatcgcgttt ttcggaattt ataaaacatt gatcggcgaa cttgaaccaa aagaatatga
     4621 tgagcacgca ataaaaacag atttaaataa taatcaggca agattttatt cggcaatatg
     4681 ggatgatgat cataaatatt tggctattga aacaacagaa gaagaagcgt taaataagaa
     4741 aagaactaat ataataaaca gcataagaac aactttaaca tcacaactgc aaagcaaaaa
     4801 ttatatttta gatataatga ttgccgcgct gaacaaaggt gattttttaa ctgttaacga
     4861 agaagttaat aatcataata atttagctga acgtttatat aaaacattta agcgcatgga
     4921 aaaagcaggc gaattaattg aaaggcatga cgggttttat cagcattttc ataaatacac
     4981 ttttaaatct gtgatttatg aaaaaatgga aagcatttta acagcggaag aattggaaaa
     5041 tatcaaaaaa gaaattgaat taaatattga ggtaatagaa gacaatcctc cattttaata
     5101 taaataatta a
//
