LOCUS       AP028554                3223 bp    DNA     circular BCT 26-JUL-2023
DEFINITION  Serratia marcescens QC07 plasmid pQC07_5 DNA, complete sequence.
ACCESSION   AP028554
VERSION     AP028554.1
DBLINK      BioProject: PRJDB10568
            BioSample: SAMD00247380
            Sequence Read Archive: DRR253476, DRR493270
KEYWORDS    .
SOURCE      Serratia marcescens
  ORGANISM  Serratia marcescens
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Yersiniaceae; Serratia.
REFERENCE   1
  AUTHORS   Nagano,D.S., Taniguchi,I., Ono,T., Katsura,K. and Hayashi,T.
  TITLE     Complete genome of Serratia marcescens QC07
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 3223)
  AUTHORS   Nagano,D.S., Taniguchi,I., Ono,T., Katsura,K. and Hayashi,T.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JUL-2023) Contact:Debora Satie Nagano Faculty of
            Medical Sciences, Kyushu university, Department of Bacteriology;
            3-1-1 Maidashi, Fukuoka, Fukuoka 812-8482, Japan
COMMENT     ##Genome-Assembly-Data-START##
            Assembly Method       :: Unicycler v. 0.4.8
            Genome Coverage       :: 175x
            Sequencing Technology :: MiSeq; Oxford Nanopore MinION
            ##Genome-Assembly-Data-END##
            Annotated by DFAST v.1.2.0 (https://dfast.nig.ac.jp).
FEATURES             Location/Qualifiers
     source          1..3223
                     /organism="Serratia marcescens"
                     /mol_type="genomic DNA"
                     /strain="QC07"
                     /host="Homo sapiens"
                     /db_xref="taxon:615"
                     /plasmid="pQC07_5"
                     /geo_loc_name="Japan"
                     /collection_date="2011"
     gene            347..691
                     /locus_tag="SMQC07_51820"
     CDS             347..691
                     /locus_tag="SMQC07_51820"
                     /inference="COORDINATES: ab initio
                     prediction:Prodigal:2.6.3"
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="BEN91383.1"
                     /translation="MADKRSKMLTMWVTEDEHRRLLERCEGKQLAAWMRQTCLDEKPAR
                     AGKLPSISPALLRQLAGMGNNLNQIARQVNAGGGSGHDRVQIVAALMAIDAGLERLRHA
                     VLEKGADDDR"
                     /name="hypothetical protein"
     gene            1369..1854
                     /locus_tag="SMQC07_51830"
     CDS             1369..1854
                     /locus_tag="SMQC07_51830"
                     /inference="COORDINATES: ab initio
                     prediction:Prodigal:2.6.3"
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="BEN91384.1"
                     /translation="MNSLLTLAKDLEQKSKAQQQTTGEMLKAAFSEHEKSVRAELSESE
                     KRISAAILDHDRKLSSAMSQRTKGMLRMVSQTWLTIVLVSALLIASSAGILWWQGQQIL
                     ENYTTIREQKSTQAMLSERNSGVQLSTCGEQRRRCVRVNPEAGQFGEDSSWMILAGK"
                     /name="hypothetical protein"
     gene            1858..2073
                     /locus_tag="SMQC07_51840"
     CDS             1858..2073
                     /locus_tag="SMQC07_51840"
                     /inference="COORDINATES: ab initio
                     prediction:Prodigal:2.6.3"
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="BEN91385.1"
                     /translation="MTELEKQLLSALEQLQQDYSKRLDEWENAFAEWRTMSGLIQRENA
                     ALNERVTVLSRQVQSLSEQLRRLSKG"
                     /name="hypothetical protein"
     gene            complement(2782..2952)
                     /locus_tag="SMQC07_51850"
     CDS             complement(2782..2952)
                     /locus_tag="SMQC07_51850"
                     /inference="COORDINATES: ab initio
                     prediction:Prodigal:2.6.3"
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="BEN91386.1"
                     /translation="MHEPPVQSDYHARSGNYQLESNPERHDKSPVAVAIGNWVHGAEIV
                     ENAYRVLEVKA"
                     /name="hypothetical protein"
     ARG             2242..2573
                     /name="qacG"
                     /gene="qacG"
                     /gene_name="small multidrug resistance (SMR) antibiotic
                     efflux pump"
                     /tool="rgi"
                     /drug_class="disinfecting agents and antiseptics"
                     /identity="41.35"
                     /coverage="102.8"
     Typing          81..272
                     /name="MOB_unknown"
                     /typing="oriT"
                     /tool="MOB-suite"
                     /identity="92.821"
                     /coverage="89.0"
                     /evalue="7.28e-73"
     Typing          complement(2824..3211)
                     /name="rep_cluster_2373"
                     /typing="replicon"
                     /tool="MOB-suite"
                     /identity="88.265"
                     /coverage="90.0"
                     /evalue="3.9799999999999997e-128"
     Typing          682..2171
                     /name="MOBP"
                     /typing="relaxase"
                     /tool="MOB-suite"
                     /identity="91.784"
                     /coverage="100.0"
                     /evalue="0.0"
ORIGIN
        1 tcgagcggca tttgcttatc ccgtaatctg tgagctggta acgcccgccg cagtctcacg
       61 gcaggagcgt agcgaccgag tgagcgagga ggcgtcattt catcaccacc tgcattttgc
      121 acttacgccc ggcagccgca tttttcccct gtcacatgaa gcactttcat aaattaccac
      181 tccgtcataa catgtttagc cagtatacac tccgctagcg ctacgtgact ggttcagggc
      241 tgcgccccga aacccgctaa aaccactgcc gcgtctgcgg cttgtccaac accgtgccga
      301 ccgggaaaag atttcccgtc cgtcccggcg ttatcaggag gccggattgg cagacaaacg
      361 cagcaaaatg ctcaccatgt gggtgactga ggacgagcac cggcgtctgc tggagcgctg
      421 cgagggtaag caactcgcgg cctggatgcg gcagacgtgc ctggacgaga agcccgcacg
      481 cgccggcaaa cttccgtcga tctcgccggc gctgcttcgt cagcttgccg gcatggggaa
      541 caaccttaac cagattgccc gccaggttaa cgccggtggt ggaagcggac acgaccgcgt
      601 gcagattgtc gccgcgctga tggccatcga tgccggactc gagcggttgc ggcatgccgt
      661 actggaaaag ggtgctgatg atgatcgtta agtttcatcc tcgggggcgc ggcggcggcg
      721 gcgggccggt cgattatctg ctgggtaaag atcgccagcg cgacggcgcc agcgttctgc
      781 aggggaagcc ggatgaagtc cgggagctta tcgacgcctc gccctacgcc aaaaagtaca
      841 cttccggcgt tctgtctttt gccgaacagg atttaccgcc cggccagcgc gaaaagctga
      901 tggcgagttt cgagcgggtt ctgatgcccg gactcgataa agaccagtac agcgtgctgt
      961 gggttgagca ccgggacaag gggcggctgg agctgaactt cctgatcccg aacacggagc
     1021 ttctgaccgg caagcggcta cagccgtatt acgaccgcgc cgaccgtccg cgcatcgatg
     1081 cctggcagac catagtgaac ggcaggctgg ggctgcatga cccgaacgcg ccggagaacc
     1141 ggcgggtgct ggtctcgcct tccgcgctgc cggaagcgaa gcaggaagcc gcccaggcga
     1201 ttacgagcgg cctgcttgcc cttgcctcat ccggggagct gaaaacgcgt caggacgtca
     1261 ctgaggcgct ggaaagcgca ggttttgagg tggtgcgcac cacaaaaagc agcatcagca
     1321 ttgccgaccc ggacgggggg cgaaacatcc gactgaaggg agccatctat gaacagtctt
     1381 ttaacgctgg cgaaggactt agagcagaaa tcgaaagcgc agcagcagac taccggcgag
     1441 atgctgaaag ccgcattcag cgagcacgag aagtctgtca gagcggaact gagcgaaagc
     1501 gagaagagaa tcagcgccgc catcctcgac cacgaccgga agctgtcctc agccatgagc
     1561 cagcgcacga aagggatgct gcgcatggtc agccagacgt ggctgaccat cgttctggtc
     1621 tccgcgctgc tgatagcgtc gagcgcgggc attctgtggt ggcaggggca gcagatactc
     1681 gagaactata cgaccatccg ggagcagaag agcacgcagg ccatgctgtc agagaggaac
     1741 agcggcgtac agctctcgac ctgcggcgag cagagacgcc gctgcgtgag ggtgaacccg
     1801 gaagcgggac agttcggaga ggactcgagc tggatgatac tggcggggaa atagcacatg
     1861 acggagctgg aaaaacagtt gctgagcgca ttagagcagc tacagcagga ctactcgaaa
     1921 aggctggacg agtgggagaa cgccttcgcg gaatggcgga cgatgtctgg tcttattcaa
     1981 cgggagaacg cggcgctgaa cgagcgcgtc acggtcttga gcaggcaggt gcagagtttg
     2041 agcgagcagc tgcgccggtt gtcgaaaggc tgaacgcgat agaaactcac cggcagcagg
     2101 agcgggcggt gcagcaccag aaagcgctgg agctggaacg atcgcagtgg cagcatcatg
     2161 gtccttcgct atgataagcc gggttctatt aattagttgt tatgtaaaga tatttaaatt
     2221 tttcaacatg aggtattttt atgaatacat atattttcct gggaggggct attgtggctg
     2281 aagtcatagg caccaccttt atgaaatatt cagaaggatt tacacgcctg tggccgtctg
     2341 taggaactgc aataagttat tgcgctgcct tttatctgct ttcccaaaca ttggaaaata
     2401 tacctaccgg tattgcttac gcaatttggt ctggtgcggg aattgtacta ataagcctag
     2461 ctggttggtt ggttagcggt caaaaacttg attggcccgc aattgcagga atgttcctta
     2521 tttgcgttgg agttttggtt attaatattt tttcaaaatc ttctgcgcat taacttttta
     2581 ccgaagcata ttggccaaag caaaaggatt tccttgagat cctttctttc tgcgcgtaat
     2641 ctttttccct gtaaacaaaa aaaccaccgc taccaacggt ggttcgtttg ccggaattca
     2701 gagctaccaa ctctttgttc cgatggtaac tggctttcac ggagcgcaga tacctaaact
     2761 gtcctttcag tgtagccgca ctcaggcttt cacttcaaga actctgtagg cattctctac
     2821 aatctctgct ccgtgaaccc agttaccaat ggctaccgcc actggcgatt tgtcgtgtct
     2881 ttccgggttg gactcaagtt gatagttacc ggaacgggcg tggtagtcgg actgaacggg
     2941 gggttcgtgc atacagtcca tcctggagcg aactgcctac ccggaaccga gtttcaggcg
     3001 tggaatgaga aaccgcggcc ataacagcgg aatgacaccg gtaaaccgaa aggcaggaat
     3061 gcgggggagc acgagggagc caccaggggg aaacgcctgg tatctttaag ccgcatcggg
     3121 tttcgccacc gctgatttga gcgtcatttt cgtgatactc gtcagggggg cggagcctat
     3181 ggaaaaacgg caactccgca tccttttctt ggcctttcct gct
//
