LOCUS       AP028542                2494 bp    DNA     circular BCT 26-JUL-2023
DEFINITION  Serratia marcescens KC069 plasmid pKC069_2 DNA, complete sequence.
ACCESSION   AP028542
VERSION     AP028542.1
DBLINK      BioProject: PRJDB10568
            BioSample: SAMD00247352
            Sequence Read Archive: DRR253446, DRR493264
KEYWORDS    .
SOURCE      Serratia marcescens
  ORGANISM  Serratia marcescens
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Yersiniaceae; Serratia.
REFERENCE   1
  AUTHORS   Nagano,D.S., Taniguchi,I., Ono,T., Katsura,K. and Hayashi,T.
  TITLE     Complete genome of Serratia marcescens KC069
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 2494)
  AUTHORS   Nagano,D.S., Taniguchi,I., Ono,T., Katsura,K. and Hayashi,T.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JUL-2023) Contact:Debora Satie Nagano Faculty of
            Medical Sciences, Kyushu university, Department of Bacteriology;
            3-1-1 Maidashi, Fukuoka, Fukuoka 812-8482, Japan
COMMENT     ##Genome-Assembly-Data-START##
            Assembly Method       :: Unicycler v. 0.4.8
            Genome Coverage       :: 111x
            Sequencing Technology :: MiSeq; Oxford Nanopore MinION
            ##Genome-Assembly-Data-END##
            Annotated by DFAST v.1.2.0 (https://dfast.nig.ac.jp).
FEATURES             Location/Qualifiers
     source          1..2494
                     /organism="Serratia marcescens"
                     /mol_type="genomic DNA"
                     /strain="KC069"
                     /host="Homo sapiens"
                     /db_xref="taxon:615"
                     /plasmid="pKC069_2"
                     /geo_loc_name="Japan"
                     /collection_date="2003"
     gene            complement(513..635)
                     /locus_tag="SMKC069_48680"
     CDS             complement(513..635)
                     /locus_tag="SMKC069_48680"
                     /inference="COORDINATES: ab initio
                     prediction:Prodigal:2.6.3"
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="BEN62177.1"
                     /translation="MNANGFKKFEHDSPYGRFGFRQNLPVCIQHHGSGIPSGTP"
                     /name="hypothetical protein"
     gene            complement(941..1126)
                     /gene="rop"
                     /locus_tag="SMKC069_48690"
     CDS             complement(941..1126)
                     /gene="rop"
                     /locus_tag="SMKC069_48690"
                     /inference="COORDINATES: ab initio
                     prediction:Prodigal:2.6.3"
                     /inference="similar to AA sequence:RefSeq:WP_002213433.1"
                     /codon_start=1
                     /transl_table=11
                     /product="rop protein"
                     /protein_id="BEN62178.1"
                     /translation="MTRQESAALNMAKFIRAQTLLLLERLEQMDLDEAAGCCEHLHDQA
                     EALYAMLNAQIGEENA"
                     /name="rop"
     Typing          807..894
                     /name="MOB_unknown"
                     /typing="oriT"
                     /tool="MOB-suite"
                     /identity="100.0"
                     /coverage="100.0"
                     /evalue="6.86e-39"
     Typing          complement(2..181)
                     /name="rep_cluster_2335"
                     /typing="replicon"
                     /tool="MOB-suite"
                     /identity="87.363"
                     /coverage="99.0"
                     /evalue="9.17e-51"
     Typing          complement(1955..2461)
                     /name="rep_cluster_2358"
                     /typing="replicon"
                     /tool="MOB-suite"
                     /identity="83.774"
                     /coverage="99.0"
                     /evalue="6.33e-132"
ORIGIN
        1 ggggggcgga gcctatggaa aaacggcttt ggcgcggcct tatgctttct tcgttaagta
       61 tcttcctggc atcccccagg aaatttctga tccatccgta agcccgtccc gctcgccgca
      121 gccgaacgac cgagcggagc gagtcagtga gcgaggaagc ggaatatatt ctgtatcaca
      181 ttttctcctg acgcgttttc tttcactttc tgcgcctgtc ttatgtggca ttaatgctat
      241 gtgttactgc catgctacat cttaagccag tatacactcc gctagtgctc cgtgactggt
      301 ccggcgctgc gcccggaacc cgcctgtacc ggttcagcag ccgttccggc ctgactgcaa
      361 tttttttttt tcatccctgc ccgctaccct gtaaaccttt cttctgcgtt gccgttaaca
      421 gtaggtaagc catgtttggt ttttcttccg gagccctgat gactcttagt gatgatgagc
      481 gacacctgct tgtgtccgtt gtttcggtct ggctacggcg tgccggaggg gatgccggag
      541 ccatgatgct ggatgcatac cggcagattt tgtctgaaac cgaaccggcc gtaaggactg
      601 tcatgctcga atttcttgaa tccgttcgca ttcattacat ttcgtcctga gcattttctg
      661 tatttctgtc catacttaaa cgaggcggcc gtcacggacg gtggtcgtcg ttccatgatg
      721 ctgttatgga cgagtgagag taatctaatc taacttgatt gagttccggg cgtgccgccc
      781 ggtttttttt gctgtttccc ggtgtccgtt ccgggacagg atgtgcattt gtaataccgc
      841 gcacgcgccg gcatcacaaa taccctggtc agggctgcgc cccgacaccc cgccatcgcc
      901 tcacggccgc gcactgaatt gcgcacccgt tcaccgattt tcacgcattt tcctcgccta
      961 tctgtgcgtt cagcatggcg taaagcgctt cggcctgatc gtgcaggtgc tcacagcagc
     1021 cggcagcctc atccagatcc atctgctcga gccgctcaag gaggagaagt gtctgtgcgc
     1081 ggataaattt ggccatattg agggcggcgg attcctgtct ggtcactggt gattttcccc
     1141 gtctggtgat gatttttgcg tgaaaagagc atggcgtcat tctggtgcat agtcatgcat
     1201 gccgttaaaa tttaacaggc gcgtttctga cgggttccgg ggtggtttgt tgtggttttt
     1261 gtcatggttt cgtcaggaac gcgctgaacg cgtctcaggc ggtgcgggca acggatgtta
     1321 tggtaaattc ttgggggctt gattataaaa taccgcactt cctcttatgt cttgtgcttt
     1381 ttagacaacc ctgaaagctt ttagctttgg tgatgcaatt tgctgggatt ttggcggaga
     1441 accacaggta aagaaaaagg ccacattagc ggcctttttc ggagaagatg ctcagtgcgg
     1501 aatttcggag acttctttaa cgtcggtttt attgatctgc tgtttgacac cattcgcgtc
     1561 tgtatagcca agcaggcctg agtctgattc tttaggtttg ccgtcgctga caatagtgcg
     1621 accgtcattg gtgtgtatgg catagcttgt gcgcgtgcag ccggtgaggg ctgaaagcgc
     1681 aactgccgct gcgaacactg aaacaaaaat ctttttcaaa gccagctcct tttatccata
     1741 tcagttttgg tcactaacca tctaactata ggtcattttt tatgtgaaaa gaggcttgat
     1801 ggtgggctgt atatcgagtt aggcgcgagg tgctatggtc aaagtgtggt gtcaggcggg
     1861 gaggaggctt atatgagatg taatccggcc gatacatata ccaagatgat ttaagtattc
     1921 ctctttgtga ggttggatgt ctaatttata aaggatcttc ttgagatcct ttttttccgc
     1981 gcgtaatctc ttgccctgta aacgaaaaaa ccaccctggc aggtggtttt tcgaaggtta
     2041 ggtaatcctg gcagatcccc taaccgtggt aacagtcttg tgcgagacat gtcaccaaat
     2101 ttgtcctttc agtgtagcct cactaaggcc gccacttcaa gaactcttga gacatctctc
     2161 gcacatcctg tttgccaatg gccgttgcca atggcgatta gtcgtgtctt tccgggttgg
     2221 actcaagttg atagttaccg gataaggcgc agcggtcgga ctgaacgggg ggttcgtgca
     2281 tacagtccat cctggagcga actgccttcc cggaactgag tgtcaggcgt ggaatgagaa
     2341 accgcggcca taacagcgga gtgacaccgg taaaccgaaa ggcaggaatg cgggggagca
     2401 cgagggagcc accaggggga aacgcctggt atctttaagc cgcatcgggt ttcgccacca
     2461 ctgatttgag cgtcagattc tgtgatgctt gtca
//
