LOCUS       AP028528                3223 bp    DNA     circular BCT 26-JUL-2023
DEFINITION  Serratia marcescens KC004 plasmid pKC004_3 DNA, complete sequence.
ACCESSION   AP028528
VERSION     AP028528.1
DBLINK      BioProject: PRJDB10568
            BioSample: SAMD00247327
            Sequence Read Archive: DRR253421, DRR493255
KEYWORDS    .
SOURCE      Serratia marcescens
  ORGANISM  Serratia marcescens
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Yersiniaceae; Serratia.
REFERENCE   1
  AUTHORS   Nagano,D.S., Taniguchi,I., Ono,T., Katsura,K. and Hayashi,T.
  TITLE     Complete genome of Serratia marcescens KC004
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 3223)
  AUTHORS   Nagano,D.S., Taniguchi,I., Ono,T., Katsura,K. and Hayashi,T.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JUL-2023) Contact:Debora Satie Nagano Faculty of
            Medical Sciences, Kyushu university, Department of Bacteriology;
            3-1-1 Maidashi, Fukuoka, Fukuoka 812-8482, Japan
COMMENT     ##Genome-Assembly-Data-START##
            Assembly Method       :: Unicycler v. 0.4.8
            Genome Coverage       :: 333x
            Sequencing Technology :: MiSeq; Oxford Nanopore MinION
            ##Genome-Assembly-Data-END##
            Annotated by DFAST v.1.2.0 (https://dfast.nig.ac.jp).
FEATURES             Location/Qualifiers
     source          1..3223
                     /organism="Serratia marcescens"
                     /mol_type="genomic DNA"
                     /strain="KC004"
                     /host="Homo sapiens"
                     /db_xref="taxon:615"
                     /plasmid="pKC004_3"
                     /geo_loc_name="Japan"
     gene            complement(775..990)
                     /locus_tag="SMKC004_50200"
     CDS             complement(775..990)
                     /locus_tag="SMKC004_50200"
                     /inference="COORDINATES: ab initio
                     prediction:Prodigal:2.6.3"
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="BEN19225.1"
                     /translation="MTELEKQLLSALEQLQQDYSKRLDEWENAFAEWRTMSGLIQRENA
                     ALNERVTVLSRQVQSLSEQLRRLSKG"
                     /name="hypothetical protein"
     gene            complement(994..1479)
                     /locus_tag="SMKC004_50210"
     CDS             complement(994..1479)
                     /locus_tag="SMKC004_50210"
                     /inference="COORDINATES: ab initio
                     prediction:Prodigal:2.6.3"
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="BEN19226.1"
                     /translation="MNSLLTLAKDLEQKSKAQQQTTGEMLKAAFSEHEKSVRAELSESE
                     KRISAAILDHDRKLSSAMSQRTKGMLRMVSQTWLTIVLVSALLIASSAGILWWQGQQIL
                     ENYTTIREQKSTQAMLSERNSGVQLSTCGEQRRRCVRVNPEAGQFGEDSSWMILAGK"
                     /name="hypothetical protein"
     gene            complement(2157..2501)
                     /locus_tag="SMKC004_50220"
     CDS             complement(2157..2501)
                     /locus_tag="SMKC004_50220"
                     /inference="COORDINATES: ab initio
                     prediction:Prodigal:2.6.3"
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="BEN19227.1"
                     /translation="MADKRSKMLTMWVTEDEHRRLLERCEGKQLAAWMRQTCLDEKPAR
                     AGKLPSISPALLRQLAGMGNNLNQIARQVNAGGGSGHDRVQIVAALMAIDAGLERLRHA
                     VLEKGADDDR"
                     /name="hypothetical protein"
     ARG             complement(276..607)
                     /name="qacG"
                     /gene="qacG"
                     /gene_name="small multidrug resistance (SMR) antibiotic
                     efflux pump"
                     /tool="rgi"
                     /drug_class="disinfecting agents and antiseptics"
                     /identity="41.35"
                     /coverage="102.8"
     Typing          complement(2577..2768)
                     /name="MOB_unknown"
                     /typing="oriT"
                     /tool="MOB-suite"
                     /identity="92.821"
                     /coverage="89.0"
                     /evalue="7.28e-73"
     Typing          2748..3221
                     /name="ColRNAI_rep_cluster_1987"
                     /typing="replicon"
                     /tool="MOB-suite"
                     /identity="84.679"
                     /coverage="91.0"
                     /evalue="1.35e-128"
     Typing          complement(678..2167)
                     /name="MOBP"
                     /typing="relaxase"
                     /tool="MOB-suite"
                     /identity="91.784"
                     /coverage="100.0"
                     /evalue="0.0"
ORIGIN
        1 ggtaactggg ttcacggagc agagattgta gagaatgcct acagagttct tgaagtgaaa
       61 gcctgagtgc ggctacactg aaaggacagt ttaggtatct gcgctccgtg aaagccagtt
      121 accatcggaa caaagagttg gtagctctga attccggcaa acgaaccacc gttggtagcg
      181 gtggtttttt tgtttacagg gaaaaagatt acgcgcagaa agaaaggatc tcaaggaaat
      241 ccttttgctt tggccaatat gcttcggtaa aaagttaatg cgcagaagat tttgaaaaaa
      301 tattaataac caaaactcca acgcaaataa ggaacattcc tgcaattgcg ggccaatcaa
      361 gtttttgacc gctaaccaac caaccagcta ggcttattag tacaattccc gcaccagacc
      421 aaattgcgta agcaataccg gtaggtatat tttccaatgt ttgggaaagc agataaaagg
      481 cagcgcaata acttattgca gttcctacag acggccacag gcgtgtaaat ccttctgaat
      541 atttcataaa ggtggtgcct atgacttcag ccacaatagc ccctcccagg aaaatatatg
      601 tattcataaa aatacctcat gttgaaaaat ttaaatatct ttacataaca actaattaat
      661 agaacccggc ttatcatagc gaaggaccat gatgctgcca ctgcgatcgt tccagctcca
      721 gcgctttctg gtgctgcacc gcccgctcct gctgccggtg agtttctatc gcgttcagcc
      781 tttcgacaac cggcgcagct gctcgctcaa actctgcacc tgcctgctca agaccgtgac
      841 gcgctcgttc agcgccgcgt tctcccgttg aataagacca gacatcgtcc gccattccgc
      901 gaaggcgttc tcccactcgt ccagcctttt cgagtagtcc tgctgtagct gctctaatgc
      961 gctcagcaac tgtttttcca gctccgtcat gtgctatttc cccgccagta tcatccagct
     1021 cgagtcctct ccgaactgtc ccgcttccgg gttcaccctc acgcagcggc gtctctgctc
     1081 gccgcaggtc gagagctgta cgccgctgtt cctctctgac agcatggcct gcgtgctctt
     1141 ctgctcccgg atggtcgtat agttctcgag tatctgctgc ccctgccacc acagaatgcc
     1201 cgcgctcgac gctatcagca gcgcggagac cagaacgatg gtcagccacg tctggctgac
     1261 catgcgcagc atccctttcg tgcgctggct catggctgag gacagcttcc ggtcgtggtc
     1321 gaggatggcg gcgctgattc tcttctcgct ttcgctcagt tccgctctga cagacttctc
     1381 gtgctcgctg aatgcggctt tcagcatctc gccggtagtc tgctgctgcg ctttcgattt
     1441 ctgctctaag tccttcgcca gcgttaaaag actgttcata gatggctccc ttcagtcgga
     1501 tgtttcgccc cccgtccggg tcggcaatgc tgatgctgct ttttgtggtg cgcaccacct
     1561 caaaacctgc gctttccagc gcctcagtga cgtcctgacg cgttttcagc tccccggatg
     1621 aggcaagggc aagcaggccg ctcgtaatcg cctgggcggc ttcctgcttc gcttccggca
     1681 gcgcggaagg cgagaccagc acccgccggt tctccggcgc gttcgggtca tgcagcccca
     1741 gcctgccgtt cactatggtc tgccaggcat cgatgcgcgg acggtcggcg cggtcgtaat
     1801 acggctgtag ccgcttgccg gtcagaagct ccgtgttcgg gatcaggaag ttcagctcca
     1861 gccgcccctt gtcccggtgc tcaacccaca gcacgctgta ctggtcttta tcgagtccgg
     1921 gcatcagaac ccgctcgaaa ctcgccatca gcttttcgcg ctggccgggc ggtaaatcct
     1981 gttcggcaaa agacagaacg ccggaagtgt actttttggc gtagggcgag gcgtcgataa
     2041 gctcccggac ttcatccggc ttcccctgca gaacgctggc gccgtcgcgc tggcgatctt
     2101 tacccagcag ataatcgacc ggcccgccgc cgccgccgcg cccccgagga tgaaacttaa
     2161 cgatcatcat cagcaccctt ttccagtacg gcatgccgca accgctcgag tccggcatcg
     2221 atggccatca gcgcggcgac aatctgcacg cggtcgtgtc cgcttccacc accggcgtta
     2281 acctggcggg caatctggtt aaggttgttc cccatgccgg caagctgacg aagcagcgcc
     2341 ggcgagatcg acggaagttt gccggcgcgt gcgggcttct cgtccaggca cgtctgccgc
     2401 atccaggccg cgagttgctt accctcgcag cgctccagca gacgccggtg ctcgtcctca
     2461 gtcacccaca tggtgagcat tttgctgcgt ttgtctgcca atccggcctc ctgataacgc
     2521 cgggacggac gggaaatctt ttcccggtcg gcacggtgtt ggacaagccg cagacgcggc
     2581 agtggtttta gcgggtttcg gggcgcagcc ctgaaccagt cacgtagcgc tagcggagtg
     2641 tatactggct aaacatgtta tgacggagtg gtaatttatg aaagtgcttc atgtgacagg
     2701 ggaaaaatgc ggctgccggg cgtaagtgca aaatgcaggt ggtgatgaaa tgacgcctcc
     2761 tcgctcactc ggtcgctacg ctcctgccgt gagactgcgg cgggcgttac cagctcacag
     2821 attacgggat aagcaaatgc cgctcgaagc aggaaaggcc aagaaaagga tgcggagttg
     2881 ccgtttttcc ataggctccg cccccctgac gagtatcacg aaaatgacgc tcaaatcagc
     2941 ggtggcgaaa cccgatgcgg cttaaagata ccaggcgttt ccccctggtg gctccctcgt
     3001 gctcccccgc attcctgcct ttcggtttac cggtgtcatt ccgctgttat ggccgcggtt
     3061 tctcattcca cgcctgaaac tcggttccgg gtaggcagtt cgctccagga tggactgtat
     3121 gcacgaaccc cccgttcagt ccgactacca cgcccgttcc ggtaactatc aacttgagtc
     3181 caacccggaa agacacgaca aatcgccagt ggcggtagcc att
//
