LOCUS       AP028488                4018 bp    DNA     circular BCT 26-JUL-2023
DEFINITION  Serratia marcescens CM5 plasmid pCM5_1 DNA, complete sequence.
ACCESSION   AP028488
VERSION     AP028488.1
DBLINK      BioProject: PRJDB10568
            BioSample: SAMD00247259
            Sequence Read Archive: DRR253350, DRR493235
KEYWORDS    .
SOURCE      Serratia marcescens
  ORGANISM  Serratia marcescens
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Yersiniaceae; Serratia.
REFERENCE   1
  AUTHORS   Nagano,D.S., Taniguchi,I., Ono,T., Katsura,K. and Hayashi,T.
  TITLE     Complete genome of Serratia marcescens CM5
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4018)
  AUTHORS   Nagano,D.S., Taniguchi,I., Ono,T., Katsura,K. and Hayashi,T.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JUL-2023) Contact:Debora Satie Nagano Faculty of
            Medical Sciences, Kyushu university, Department of Bacteriology;
            3-1-1 Maidashi, Fukuoka, Fukuoka 812-8482, Japan
COMMENT     ##Genome-Assembly-Data-START##
            Assembly Method       :: Unicycler v. 0.4.8
            Genome Coverage       :: 86x
            Sequencing Technology :: MiSeq; Oxford Nanopore MinION
            ##Genome-Assembly-Data-END##
            Annotated by DFAST v.1.2.0 (https://dfast.nig.ac.jp).
FEATURES             Location/Qualifiers
     source          1..4018
                     /organism="Serratia marcescens"
                     /mol_type="genomic DNA"
                     /strain="CM5"
                     /host="Homo sapiens"
                     /db_xref="taxon:615"
                     /plasmid="pCM5_1"
                     /geo_loc_name="Japan"
                     /collection_date="2014"
     gene            complement(2134..2661)
                     /locus_tag="SMCM5_46300"
     CDS             complement(2134..2661)
                     /locus_tag="SMCM5_46300"
                     /inference="COORDINATES: ab initio
                     prediction:Prodigal:2.6.3"
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="BEM21628.1"
                     /translation="MKCFWACSVSVVLAMSFTVAAAENNDNVTYTKPSAGRDLYLTCKG
                     YQVKGASVINVEKPSYLEGTGEQVEFAIITPVGASDGLKVFFDSWGFSSFGLIESHVMH
                     EHWSLVHVGGRASVKGEKIDYSFVDNQPQEGGSYKPKTGVFLYGCMNSDKRPSWVEKIY
                     TRTGVFRGGIED"
                     /name="hypothetical protein"
     gene            complement(2790..3005)
                     /locus_tag="SMCM5_46310"
     CDS             complement(2790..3005)
                     /locus_tag="SMCM5_46310"
                     /inference="COORDINATES: ab initio
                     prediction:Prodigal:2.6.3"
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="BEM21629.1"
                     /translation="MTELEKQLLSALEQLQQDYSKRLDEWENAFAEWRTMSGLMQRENA
                     ALSERVTGLSRQVQSLSDQLRRLSQG"
                     /name="hypothetical protein"
     gene            complement(3009..3494)
                     /locus_tag="SMCM5_46320"
     CDS             complement(3009..3494)
                     /locus_tag="SMCM5_46320"
                     /inference="COORDINATES: ab initio
                     prediction:Prodigal:2.6.3"
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="BEM21630.1"
                     /translation="MNSLLTLAKDLEQKSKAQQQTTGEMLKAAFSEHEKSVRAELSESE
                     KRISAAILDHDRKLSSAMSQRTKGMLRMISQTWLTIVLVSALLIASSAGILWWQGQQIL
                     DNYTTIQEQKSTQAMLSEKNNGVQLTTCGEERRRCVRVNPEAGRFGEDSSWMILAGK"
                     /name="hypothetical protein"
     Typing          complement(591..768)
                     /name="MOB_unknown"
                     /typing="oriT"
                     /tool="MOB-suite"
                     /identity="87.222"
                     /coverage="83.0"
                     /evalue="4.5e-50"
     Typing          715..1238
                     /name="ColRNAI_rep_cluster_1987"
                     /typing="replicon"
                     /tool="MOB-suite"
                     /identity="89.434"
                     /coverage="99.0"
                     /evalue="0.0"
     Typing          complement(158..477)
                     /name="MOBP"
                     /typing="relaxase"
                     /tool="MOB-suite"
                     /identity="94.393"
                     /coverage="100.0"
                     /evalue="8.43e-62"
     Typing          complement(2699..4017)
                     /name="MOBP"
                     /typing="relaxase"
                     /tool="MOB-suite"
                     /identity="91.364"
                     /coverage="99.0"
                     /evalue="0.0"
ORIGIN
        1 gaggtgtatt tcttggcgta aggcgaggcg tcaataagct cccgcacttc ctccggctta
       61 ccctgcagaa cgctggcgcc gtcgcgctgc cggtctttcc ccagcagata atccaccgga
      121 ccgccgccac cgccgcggcc tctgggatga aacttaacga tcatcgtctg cccccttttc
      181 cagcacggcg tgccgcagcc gctcgagtcc ggcatcaatg gccatcagca cggcgacaac
      241 ctgcacgcga tcgtgcccag taccgccacc ggcgttaacc tgccgggcaa tctggttgag
      301 gttgttaccc atgccggcaa gctgacgaag cagcgccggc gagatggatg gaagtttgcc
      361 agcacgcgag ggcttttcgt ccaggcatat ctggcgcatc caggccgcga gttgtttacc
      421 ctcacagcgc tccagaagtc ggcggtgctc gtcttctgtc acccacatag tgagcatttt
      481 gttgcgcttt tctgccaaac catcctccgg ataacaccgg ttcgggcggg aaattttttc
      541 ctgtccggag cggtgttggg caagcccgca gggcgcggca gtacttttca gcgggtttcg
      601 gggcgcagcc ctgaaccagt cacgtagcgc tagcggagtg tatactggct taacatggta
      661 aatcggagtg gggattcagg aaagtgcttc atgtggcagg gagaaaatgc tgctgtgggg
      721 cgtaagtgcg aaatgcagat cccggtgaaa tgacgcctcc tcgctcactc ggtcgctgcg
      781 ctcctgccgt gagactgcgg cgggcgttgc cagcttacga atggctggat aaagagacta
      841 agcggaaatc aatcagaaag ggcggaaaaa ggatgcggcg ttgccgtttt tccataggct
      901 ccgcccccct gacaagcatc acgaaatctg acgctcaaat cagtggtggc gaaacccgac
      961 aggactataa agatcccagg cgtttccccc tggtagctcc ctcgtgcgct ctcctgttcc
     1021 tgcctttcgg tttaccggtg tcattccgct gttatggccg cgtttatcta attccacgcc
     1081 tgacactcag ttccgggtag gcagttcgct ccaagctgga ctgtatgcac gaaccccccg
     1141 ttcagtccga ccgctgcgcc ttatccggta actatcgact tgagtccaac ccggaaagac
     1201 acgacaaaac gccactggca gcagccactg gtaactgatt tagaggagtt agtcttgaag
     1261 ttatgcgccg gttaaggcta aactgaaagg acaagttttg gtgactgtgc tcctccaagc
     1321 cagttacctc ggttcaaaga gttgctgctc tgagaacctt cgaaaaaacc gccttgctgg
     1381 gcggtttttt cgtttacagt gctaagagat tacgattctc catgaatgat ctcaagaaga
     1441 tccgtttaaa aaagcgggtt ttatgggggg ataaagttcg tctagcccag tcactttgga
     1501 ttacagctag gtttcgtaag ccatgcaaga atgcctgtaa ctaacaaaat aggccctgca
     1561 acgtacgtaa catagactcc aacatacgac actgtgaaac atatgagtac gtatatagac
     1621 agtgttgtcc aaaaaatgac tgttgtttta cagtgaatcc actctttcat ttttcaataa
     1681 accccacacc gtctggagat cttattatcg ttttgccagg attagctttc gcccaaacca
     1741 aagcatcttg aaaagaagag aatttttttt ttgaattttt agtttttcgg cgatcttctc
     1801 gaaaatattc gctgttattc tcatcaatta tccgatcaaa atcagcacca gctccaaagg
     1861 tacgctcaaa atcccccatt ttctgccccc attaaattta ataaaaaaac agatttaaaa
     1921 tatccaaaag acactcttat ttaccataac atcccttgtt cgcaccgccg cagacagcct
     1981 cagcaccgtt ctgcgccatg aaccgcaaaa gagcacctct taccacgtaa aaacgccgat
     2041 aaatgccccc cgtaagttct tacggtatgc atagttatgc acggaaatga actgacactc
     2101 tgttcaatgg attttcatgc tgtaagcagt attttagtct tctatgcccc ctcgaaacac
     2161 acctgttctt gtgtagatct tttcgaccca agatggtctt ttatccgagt tcatgcagcc
     2221 gtacaggaac acacctgttt tgggtttata gctccccccc tcctgtggct ggttatctac
     2281 aaatgaataa tcaatctttt cacctttgac tgaagcacgc cccccaacat gaactaaaga
     2341 ccagtgctca tgcatcacat ggctttcaat caatccaaat gaagaaaaac cccatgaatc
     2401 aaaaaagacc ttgagtccgt cagacgcacc aacaggagta atgattgcaa attcaacctg
     2461 ctcaccagta ccttcaaggt aagaaggttt ctcgacgtta attacagatg cccccttcac
     2521 ctgataacct ttacaggtaa gatataagtc cctcccggct gacggttttg tatatgtaac
     2581 gttgtcgtta ttctccgcag cagcgactgt aaatgacata gccaaaacca ccgagactga
     2641 gcaagcccag aaacatttca taacgcatcc cttttcattg attaactaca ttccaagctc
     2701 aaaacctttc tgccgctgcg atcgttccag ctccagcgct ttctggtgct gcgccgcgcg
     2761 ctcctgctcc cggtgcgcct cgatgccatt cagccttgcg acaatcggcg cagctgatcg
     2821 ctcaaactct gcacctgcct gctcaagccc gtgacgcgct cgctcagcgc cgcgttctcc
     2881 cgttgcataa gcccagacat cgtccgccat tccgcgaagg cgttctccca ctcgtccagc
     2941 cttttcgagt agtcctgctg tagctgctct aatgcgctca gcaactgttt ttccagttcc
     3001 gtcatgtgct atttccccgc cagtatcatc cagctcgaat cctctccgaa tcttcccgct
     3061 tccgggttca ccctcacgca gcggcgtctc tcctccccgc aggtcgtgag ctggacgccg
     3121 ttgttcttct ctgaaagcat ggcctgcgtg ctcttctgtt cctggatggt cgtgtagttg
     3181 tcgagtatct gttgcccctg ccaccacaga atgcccgcgc tcgaggcgat cagtagcgcg
     3241 gagaccagga ctatggtcag ccacgtctgg ctgatcatac gcagcatccc tttcgtgcgt
     3301 tggctcatgg ctgaggacag cttccggtcg tggtcgagga tggcggcgct gattctcttc
     3361 tcgctttcgc tcagttccgc tctgacagac ttctcgtgct cgctgaatgc ggctttcagc
     3421 atctcgccgg tagtctgctg ctgcgctttc gatttctgct ctaagtcctt cgccagcgtt
     3481 aaaagactgt tcatagatgg ctcccttcag tcggatgttt cgccccccgt cagggtcggc
     3541 aatgctgatg ctgcttttcg tggtgcgcac cacctcaaaa cccgcacttt ccagcgcctc
     3601 agtgacgtcc tgacgggttt tcagctcccc ggatgaggca agggaaagta ggccgcgcgt
     3661 aatcgcctgg gcggcttcct gcttcgcttc cggcagcgcg gacggtgtaa ccagcgcccg
     3721 ccggttttcc ggcgcattcg ggtcgtgcag ccccagtctg ccgttcacta tggtctgcca
     3781 ggcatcaatg cgcggacggt cggcgcggtc gtaatacggc tggagacgtc tgccggtcag
     3841 cagctccgtg ttcgggatca ggaagttcag ctccagccgc cctttgtccc ggtgctcaac
     3901 ccacagtacg ctgtactggt ctttatcgag tccgggcatc agaacccgct caaagctcgc
     3961 catcagcttt tcacgctggc cgggcggcaa atcctgttcg gcaaaagaca gcacgccg
//
