LOCUS       AP028484                2511 bp    DNA     circular BCT 26-JUL-2023
DEFINITION  Serratia marcescens 14VA5 plasmid p14VA5 DNA, complete sequence.
ACCESSION   AP028484
VERSION     AP028484.1
DBLINK      BioProject: PRJDB10568
            BioSample: SAMD00247252
            Sequence Read Archive: DRR253343, DRR493233
KEYWORDS    .
SOURCE      Serratia marcescens
  ORGANISM  Serratia marcescens
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Yersiniaceae; Serratia.
REFERENCE   1
  AUTHORS   Nagano,D.S., Taniguchi,I., Ono,T., Katsura,K. and Hayashi,T.
  TITLE     Complete genome of Serratia marcescens 14VA5
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 2511)
  AUTHORS   Nagano,D.S., Taniguchi,I., Ono,T., Katsura,K. and Hayashi,T.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JUL-2023) Contact:Debora Satie Nagano Faculty of
            Medical Sciences, Kyushu university, Department of Bacteriology;
            3-1-1 Maidashi, Fukuoka, Fukuoka 812-8482, Japan
COMMENT     ##Genome-Assembly-Data-START##
            Assembly Method       :: Unicycler v. 0.4.8
            Genome Coverage       :: 184x
            Sequencing Technology :: MiSeq; Oxford Nanopore MinION
            ##Genome-Assembly-Data-END##
            Annotated by DFAST v.1.2.0 (https://dfast.nig.ac.jp).
FEATURES             Location/Qualifiers
     source          1..2511
                     /organism="Serratia marcescens"
                     /mol_type="genomic DNA"
                     /strain="14VA5"
                     /host="Homo sapiens"
                     /db_xref="taxon:615"
                     /plasmid="p14VA5"
                     /geo_loc_name="France"
                     /collection_date="2014"
     gene            complement(1702..1887)
                     /gene="rop"
                     /locus_tag="SM14VA5_46770"
     CDS             complement(1702..1887)
                     /gene="rop"
                     /locus_tag="SM14VA5_46770"
                     /inference="COORDINATES: ab initio
                     prediction:Prodigal:2.6.3"
                     /inference="similar to AA sequence:RefSeq:WP_002213433.1"
                     /codon_start=1
                     /transl_table=11
                     /product="rop protein"
                     /protein_id="BEM12173.1"
                     /translation="MTRQESAALNMAKFIRSQTLLLLERLEQMDLDEAAGCCEHLHDQA
                     EALYTMLNAQTGEEDA"
                     /name="rop"
     gene            complement(2254..2481)
                     /locus_tag="SM14VA5_46780"
     CDS             complement(2254..2481)
                     /locus_tag="SM14VA5_46780"
                     /inference="COORDINATES: ab initio
                     prediction:Prodigal:2.6.3"
                     /inference="similar to AA sequence:RefSeq:NP_311696.1"
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="BEM12174.1"
                     /translation="MKKIFVSVFAAAVALSALTGCTRTSYAIHTNDGRTIVSDGKPKES
                     DSGLLGYTDANGVKQQINKTDVKEVSEIPH"
                     /name="hypothetical protein"
     Typing          1576..1655
                     /name="MOB_unknown"
                     /typing="oriT"
                     /tool="MOB-suite"
                     /identity="100.0"
                     /coverage="100.0"
                     /evalue="1.67e-34"
     Typing          complement(377..937)
                     /name="rep_cluster_2335"
                     /typing="replicon"
                     /tool="MOB-suite"
                     /identity="88.339"
                     /coverage="91.0"
                     /evalue="0.0"
ORIGIN
        1 gtcactaacc atctaactat aggtcatttt ttatgtgaaa agaggcttga tggtgggctg
       61 catatcgagt taggtgcgag gtgttatggt taaagtgtgg tgtctggcgg ggagggggca
      121 gtgcgggctt atatctgatg taatccgacc gatacatata ccaagatgat ttaagtattc
      181 ctctttgtga ggttggatgt ctaatttata aaaggatctt cttgagatcc ttttttttcg
      241 cgcgtaatct cttgccctgt aaacgaaaaa accacccggc aaggtggttt ttcgaaggtt
      301 cagcaaaccg gcaagtttct gaaccgtggt aacagggtgt acaagaccgc tgccaccaaa
      361 tttgtccttc tagtgtagcc gcagtcaggc gtcaacttca agaactctgc accagtaatc
      421 ttgtataccc cttaccagtg gccgctgcca gtggcgtttt tacgtgtctt tccgggttgg
      481 actcaagacg atagttaccg gataaggcgc agcagtcgga ctgaacgggg ggttcgtgca
      541 tacagtccat cctggagcga actgccttcc cggaaccgag tgtcaggcgt ggaatgagaa
      601 accgcggcca taacagcgga gtgacaccgg taaaccgaaa ggcaggaatg cgggggagca
      661 cgagggagcc atcaggggga aacgcctggt atctttaagc cgcatcgggt ttcgccacca
      721 ctgatttgag cgtcagattt cgtgatgctc gtcagggggg cggagcctat ggaaaaacgg
      781 cttcggcgcg gccttatgcc ttcttcgcta agtatcttcc tggcatcccc tagctggcat
      841 cccccaggaa atttctgctc cacccgtaag cccgtaccgc tcgccgcagc cgaacgaccg
      901 agcgcagcga gtgagtgagc gaggaagcgg aatatatcct gtattacatt ttctcctgac
      961 gcgttttctt tcattttctg cgcctgtctt atgtagcagt tatgctatgc gttactgcgg
     1021 tgttacattt tagccagtat acactccgct agcgctgagt gactggtccg gcgctgcgcc
     1081 cggaacccgc ctgtaccggt tcagcagccg ttccgggctg actgcaattt ttttattttc
     1141 ctgcccgcta ccctgtaaac ctttcttctg cgttgccgtt aacaggaggt aagccatgtt
     1201 tggtttttct tccggagacc tgatgactct tgatgatgag cgacacctgt ttgtgtctgt
     1261 tgtttcgggc tggctccggc gtgccggggg gatgccggag ccatgatgct ggatgcatac
     1321 cggcagattt tgtctgaaac tgaaccggcc gtaaggacgg tcatgctcga atttcttgaa
     1381 tccgttcgca ttcattacat ttcgtcctga gcattttctg tatttctgtc catacttaaa
     1441 cgaggcggcc gtcacggacg atggtcgtcg ttgcatgatg ctgttatgga tgagtgaaag
     1501 taatctaatc taacttgact taccttccgg gcagctcccc ggtttttttt tgcctgttcc
     1561 cggggaacca ctcaggacag gatgtgtatt tgtaataccg cgcacgcgcc ggcatcacaa
     1621 atacccaggt cagggctgcg ccccgacacc ccgccatcgc ctcacggccg cgcactgaat
     1681 tgcgcacccg ttcaccgatt ttcacgcatc ttcctcgcct gtctgtgcgt tcagcatggt
     1741 gtaaagtgct tcggcctgat cgtgcaggtg ctcacagcag ccggcagcct catccagatc
     1801 catctgttcg agccgctcga ggaggaggag tgtctgtgag cggataaatt tggccatgtt
     1861 gagggcggcg gattcctgtc tggtcactgg tgattttccc cgtctggtga tgatttttgc
     1921 gtgaaaagag catgccgtca ttctggtgca tagtcatgca tgccgttaaa atttaacagg
     1981 agcgtttctg gcgggttccg gggtggtttg ttgtggtttt tggtcatggt tccgtcagaa
     2041 aagcgctgag tgcgtctgag gcggtgcggg caacggatgt tatggtaaat tcttgggggg
     2101 cttgattata aaaaccgcac ttcctctaat gtcttgtgct ttttagacaa ccctggaagc
     2161 ttttagcttt ggtggtgcaa tttgctggga ttttggcgga gaaccccagg taaagaaaaa
     2221 ggccacatta gcggcctttt tcggagaaga tgctcagtgc ggaatttcgg agacttcttt
     2281 aacgtcggtt ttattgatct gctgtttgac accattcgcg tctgtatagc caagcaggcc
     2341 tgagtctgat tctttaggtt tgccgtcgct gacaatagtg cgcccgtcat tggtgtgtat
     2401 ggcatagctt gtgcgcgtgc agccggtgag ggctgaaagc gcaactgccg ctgcgaacac
     2461 ggaaacaaaa atctttttca aagccagctc cttttatcca tatcagtttt g
//
