LOCUS       AP028468                4809 bp    DNA     circular BCT 26-JUL-2023
DEFINITION  Serratia marcescens 12BL3 plasmid p12BL3_1 DNA, complete sequence.
ACCESSION   AP028468
VERSION     AP028468.1
DBLINK      BioProject: PRJDB10568
            BioSample: SAMD00247222
            Sequence Read Archive: DRR253313, DRR493227
KEYWORDS    .
SOURCE      Serratia marcescens
  ORGANISM  Serratia marcescens
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Yersiniaceae; Serratia.
REFERENCE   1
  AUTHORS   Nagano,D.S., Taniguchi,I., Ono,T., Katsura,K. and Hayashi,T.
  TITLE     Complete genome of Serratia marcescens 12BL3
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4809)
  AUTHORS   Nagano,D.S., Taniguchi,I., Ono,T., Katsura,K. and Hayashi,T.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JUL-2023) Contact:Debora Satie Nagano Faculty of
            Medical Sciences, Kyushu university, Department of Bacteriology;
            3-1-1 Maidashi, Fukuoka, Fukuoka 812-8482, Japan
COMMENT     ##Genome-Assembly-Data-START##
            Assembly Method       :: Unicycler v. 0.4.8
            Genome Coverage       :: 121x
            Sequencing Technology :: MiSeq; Oxford Nanopore MinION
            ##Genome-Assembly-Data-END##
            Annotated by DFAST v.1.2.0 (https://dfast.nig.ac.jp).
FEATURES             Location/Qualifiers
     source          1..4809
                     /organism="Serratia marcescens"
                     /mol_type="genomic DNA"
                     /strain="12BL3"
                     /host="Homo sapiens"
                     /db_xref="taxon:615"
                     /plasmid="p12BL3_1"
                     /geo_loc_name="France"
                     /collection_date="2012"
     gene            961..1152
                     /gene="rop"
                     /locus_tag="SM12BL3_46350"
     CDS             961..1152
                     /gene="rop"
                     /locus_tag="SM12BL3_46350"
                     /inference="COORDINATES: ab initio
                     prediction:Prodigal:2.6.3"
                     /inference="similar to AA sequence:RefSeq:WP_002213433.1"
                     /codon_start=1
                     /transl_table=11
                     /product="rop protein"
                     /protein_id="BEL83328.1"
                     /translation="MTKQQKTALNMAKFIQNQSLLLLEKLNELDLDVEADLCEKLHDDA
                     EHLFRTLSSRLDALQDGN"
                     /name="rop"
     gene            complement(2395..2604)
                     /locus_tag="SM12BL3_46360"
     CDS             complement(2395..2604)
                     /locus_tag="SM12BL3_46360"
                     /inference="COORDINATES: ab initio
                     prediction:Prodigal:2.6.3"
                     /inference="similar to AA sequence:RefSeq:WP_013095921.1"
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="BEL83329.1"
                     /translation="MKSIKTFVAVAALSMMSFGAFAQSVSATASTLDRAEAKIAAQAAE
                     QGASYKITSAQFNNRVHMTAELTK"
                     /name="hypothetical protein"
     gene            complement(3308..3853)
                     /locus_tag="SM12BL3_46370"
     CDS             complement(3308..3853)
                     /locus_tag="SM12BL3_46370"
                     /inference="COORDINATES: ab initio
                     prediction:Prodigal:2.6.3"
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="BEL83330.1"
                     /translation="MASYFPTLDISGEEFDFTHLEPFIMHVNSDMAKKVLKVHVRFTNH
                     CFTKGYEAFYHPAGEQIIYDHSGNGRTFCPIRYRLSLALPEIINRLCDPAEKVYQTSAK
                     RNWAYSITIDDPEGPYHLFFEIRRASRDEKHLQDLNMVIESAYPEDRGYGPPSLLGRIG
                     FVGLCGRVFCGKPLATKR"
                     /name="hypothetical protein"
     gene            complement(3857..4426)
                     /locus_tag="SM12BL3_46380"
     CDS             complement(3857..4426)
                     /locus_tag="SM12BL3_46380"
                     /inference="COORDINATES: ab initio
                     prediction:Prodigal:2.6.3"
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="BEL83331.1"
                     /translation="MAKLPLPLPIASPPTVSNSGSERAKKSGRRTLSAKRKTLLEELWG
                     DELEQLKVWNRHEHDGYTTVPRTLTYISRILDYLGGTGLPLSQTYLALWCRVFDEGFVE
                     IRDKDGFAYEAGFSGQRAVTTWTGRMRKLRDLGFITTKPGTSGEFQYVILLNPLTVIKE
                     LYEGKEKDERYNALVGRMQEVGAKWE"
                     /name="hypothetical protein"
     Typing          complement(438..840)
                     /name="ColRNAI_rep_cluster_1987"
                     /typing="replicon"
                     /tool="MOB-suite"
                     /identity="93.35"
                     /coverage="99.0"
                     /evalue="3.56e-168"
ORIGIN
        1 caggaaatga cttggctctt gcctgagcgc gtctgagagc tatgtgtgga tgttgatggg
       61 ggtagcttgg aaaacgggaa ttatcttacg ttaagcgttt tgagcttaac gggtaatttc
      121 gctccagtga gcggaatcac ctgaccgtag ttgtatatgg ttttaatcga cggtgacggg
      181 agttgaatgt gatagtgaag cgagctgcaa ttagttaagg atcttcttga gatcccattt
      241 gtatcgtcgt aatctcttgc tctgaaaacg aaaaaaccac ctggggaggt ggtttgatcg
      301 aaggttaagt tagttgggga actgcttaac caggtaactg tcttgtgcga gacgagtcac
      361 caaaactgtt ctttcagtgt agctgtagtc cggccatcac ttcaagtact ctctaaaatc
      421 tctcgcacat tgactcttac caatggctgc tgccagtggc gctttgtcgt gtctttccgg
      481 gttggactca agatgatagt taccggttaa ggcgcagcgg tcggactgaa cggggggttc
      541 gtgcagacag tccagcttgg agcgaactgc cttctcggaa ctgagtgtct ggcgtggaat
      601 gagataaacg cggccataac agcggaatga caccggcaaa ccgaatggca ggaacaggag
      661 agcgcacgag ggagccatca gggggaaacg cctggtatct ttatagtcct gtcgggtttc
      721 gccaccactg atttgagcgt cagattctgt gatgcttgtc aggggggcgg agcctatgga
      781 aaaacggcaa cgccgcggcc tttcctttct ccatcacgcg attgctcggt tttctcgagc
      841 ttttgtacgc atgctcctgc cgctcgccgc agccgaacgg caggagcgta gcgactgagt
      901 gagcgaggaa gcggaaaaga gaacatccct acactgagca ctgacgctgt gaggcctctt
      961 atgacgaaac aacagaaaac agcgctgaat atggcaaaat tcatccagaa tcagtctctg
     1021 ctcctgctgg agaagcttaa cgagcttgat ctcgatgtcg aggccgacct ttgtgagaaa
     1081 ctccacgatg atgcggagca tcttttccgt acactgtcct cgagactgga tgcattacag
     1141 gatggtaact gatggccaga gtgtctatta gtgaggctgc acgactgacg ggtaagagta
     1201 gaacaacact gcacaggtta attaaagcag gtgacctgtc cacctgtagc ggtgaacgta
     1261 atgcaaaaat ggtagatact tcagagcttt tacgtgtctt tggtcccttt gagcaaccga
     1321 agggtgaaca ccattctgga caggtctctg aacagcgtga tacagcctct gctgaccaga
     1381 gtgaacaggt gattcgtcat ctgaaacagg agattgaaca cctgaacacc ttacttttgt
     1441 ccaaggattc gcacattgac agcctgaaac aggccatgct ccttcttgaa aatcaccagg
     1501 caaaattaac tgaatccccg gcgccatggt ggaaattctg gaaaaaatcc tgaccccgtc
     1561 atgcttcagt tttcctctcc ggtcattccg gggagttcct gaaccttccc aaaaatcgtc
     1621 agatctctga acgctcctca ccactaaaaa tacccacacc ccacgcaaaa ttaaaatttt
     1681 gaagataact cattaatatc agttagttgt gggttattaa attacgcagt attactttct
     1741 gtaaggtgaa tccaagtcgt cggcgattcg tgtacgactt gccgacgact cgtcatagag
     1801 tcatcgacga ctcacttaag actatcagta acttatgacg acttgactct agagtcgaat
     1861 cgtcattttg gtgttttttt gaccttggcg actctagagt caagtcacga gtcgaatcgc
     1921 cggtgaatcg tgtggtgagt cgtccggcga cttgccataa cgtcattgcc ggccgtcgac
     1981 gaaccccatt cctgagtgtg ctgaaaaccg gttttccggc tgcgccggca acgcttcacg
     2041 gccacgcaat aaattgcgtc cccgttcacc gttttcggat aggaagaacg ccggaaacag
     2101 gacttaccct ggctgaatgg cgtgaatttt cgcgctatgc acttgcgtgc atactcatgc
     2161 atgccgtaaa aacagagcct gcgcgtttct ggcgggtttt cgggtggttt gttgcctgtt
     2221 ttaccggttt cccgtcggaa acgccctgag gccgttttag cggtgcgtac aatcatgcct
     2281 ttatgttaaa tgacagatgc aaaaaagccc cgaaggggcc tgaaggtttt cctgctaagg
     2341 gacgaaacgg gccgcctccc ggcgacctgt tcggcagctc cctctgcgac catcttattt
     2401 ggtcagttca gccgtcatgt ggacacggtt attgaactga gcgctggtga ttttgtatga
     2461 cgcaccttgt tcagcggcct gtgcggcaat ttttgcttca gcacgatcca gggtggaggc
     2521 ggtagcgctg acgctctgag caaaggcacc gaaagacatc atggatagag cggcaactgc
     2581 aacgaaagtt ttgatggatt tcatggtcgt attccttaag tcattttgtt ctgtatgggg
     2641 cgttgttgcc ctgatgtgat aaatgatagg acgaccatga actgattaaa atcgaaacaa
     2701 tttgcggata ttattcaaaa aaatagaaca aaaattgagc gcatcaaaac caggtgtgag
     2761 actctgattt aggggcagga tgaatagcct cgaggggtcg cacaattatt aggcgacaat
     2821 tacaccgacc gctgccgtca ggctgagggt atcagtgaaa gctgccgtgc gacgattgcc
     2881 aatgcatcaa ggtgatgaaa acaggagggg atttattttt taaatgaaaa caactatcta
     2941 tgtttttttc tattgtagtg aaatcatggt gaatcataag aacagatgca ttttataaaa
     3001 caactcagaa gttgagttgt tttataaaat gcatcttgcc atttaaattc agatggttac
     3061 ttatggtttc tgtactcatg gtgctccata tgaatcaaag cattgcattg aaccggtggt
     3121 gctgaattgc gttattggtt ttgttatatt gtttacatcg tagcgactga ccggatgaga
     3181 ttgagcgcta cccagcagga caaatcttgt tcctgtgttc gcgcaaggcg aacctaagca
     3241 aaagctagtg gtgtccggaa cgattaccaa agaaacagaa aaaaggcacc tttcaggtgc
     3301 ttttttttca tcttttagtc gccagaggct tcccacaaaa taccctaccg cataacccta
     3361 caaagccaat tcgccctagt aaggacggag gcccgtaccc tcgatcttca ggataggcac
     3421 tctcgataac catgttcaaa tcttgtaggt gtttctcatc acgcgaggcg cgtcttattt
     3481 caaaaaataa gtgatatggc ccctctggat catcaatcgt aatcgagtag gcccagtttc
     3541 tctttgctga tgtttgatac accttttctg ctggatcgca tagacggttg ataatctcag
     3601 gtaatgccaa agataatcta tatctaattg ggcaaaacgt tctcccattc ccgctatggt
     3661 cgtaaattat ctgttctcct gctgggtgat aaaaagcttc ataacctttt gtaaaacaat
     3721 gatttgtgaa cctaacgtgt acttttaata cctttttagc catatcgcta tttacgtgca
     3781 taatgaatgg ctcaaggtga gtgaaatcga actcttctcc agatatgtct aacgtcggga
     3841 aatagctagc catgaattac tcccatttag caccaacctc ctgcatacgg cccactaatg
     3901 cattgtatct ttcatctttt tccttacctt cgtataactc cttaatgaca gtcagtgggt
     3961 taagcaaaat cacatattga aactcacctg atgtgccagg ttttgtagtt atgaaaccta
     4021 aatctcttag ttttctcatc ctccctgtcc atgtggttac tgctcgctgt ccactaaaac
     4081 cagcttcata agcaaatcca tctttatctc ttatttccac aaagccctca tcaaataccc
     4141 tgcaccaaag agccagatat gtttgggaca atggcagtcc cgttcctccg agataatcga
     4201 gaattcgact gatatatgtc agcgttcttg gcacagttgt atacccgtca tgctcatggc
     4261 gattccatac cttgagttgt tcaagttcgt ctccccatag ttcttctaac aaggttttcc
     4321 tttttgctga aagagttctt cttcctgact tcttcgctct ttctgagcca ctattgctta
     4381 ctgttggggg ggacgctatc ggtagtggca gtggtaactt cgccattata ttctccaaaa
     4441 tcatttaaca tacggttatt ttaagtgttt tttcttttaa aacaatgagt tatgttgtgt
     4501 tttgcgtgtg gttgtgatgt tgcctttcaa cgtataggta tcttgtgagt atgtatttat
     4561 tacaactcaa tctgtgagtt gtaataaata cagcatatgg tgactgatat tcaacgagtt
     4621 atgacaggtt tctgtgctcg ctgtgcttaa ttgtactcaa tgtgctgaat gtgctcgcgg
     4681 tgctgaatgg ggatgcaagg gggcaaggta ataattttac ggcagccatt taatgcaaat
     4741 cgatatgcct gctcatagtg ccctgtgttc gattttcggt ggtttttatg gttatggtgt
     4801 ggtttgggg
//
