LOCUS       AP027812                4035 bp    DNA     circular BCT 03-NOV-2023
DEFINITION  Escherichia coli 2017.12.01CC plasmid p2017.12.01CC_5 DNA, complete
            sequence.
ACCESSION   AP027812
VERSION     AP027812.1
DBLINK      BioProject: PRJDB14867
            BioSample: SAMD00562598
KEYWORDS    .
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1
  AUTHORS   Hoang,H.T.T., Yamamoto,M., Calvopina,M., Bastidas-Caldes,C.,
            Khong,D.T., Nguyen,T.N. and Yamamoto,Y.
  TITLE     Comparative genome analysis of colistin-resistant Escherichia coli
            strains possessing mcr isolated in Ecuador and Vietnam
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4035)
  AUTHORS   Yamamoto,Y. and Hoang,H.T.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAR-2023) Contact:Yoshimasa Yamamoto The United
            Graduate School of Drug Discovery and Medical Information Sciences,
            Gifu University; Yanagido 1-1, Gifu 501-1194, Japan
COMMENT     ##Genome-Assembly-Data-START##
            Assembly Method       :: CLC Genomics Workbench v. 21.0.3
            Genome Coverage       :: UN
            Sequencing Technology :: MGI DNBSEQ-G400RS; ONT MinION Mk1c
            ##Genome-Assembly-Data-END##
            Annotated by DFAST https://dfast.ddbj.nig.ac.jp/
FEATURES             Location/Qualifiers
     source          1..4035
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="2017.12.01CC"
                     /isolation_source="feces"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /plasmid="p2017.12.01CC_5"
                     /geo_loc_name="Viet Nam:Thai Binh"
                     /collection_date="2017"
     gene            complement(1268..1417)
                     /locus_tag="VEE57_45410"
     CDS             complement(1268..1417)
                     /locus_tag="VEE57_45410"
                     /inference="COORDINATES: ab initio
                     prediction:MetaGeneAnnotator"
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="BEC72825.1"
                     /translation="MPSEYDEQLDSTDTQLPGEYDLFDLMAQVTEENLHAPVDFGPPVG
                     REAL"
                     /name="hypothetical protein"
     gene            2607..2774
                     /locus_tag="VEE57_45420"
     CDS             2607..2774
                     /locus_tag="VEE57_45420"
                     /inference="COORDINATES: ab initio
                     prediction:MetaGeneAnnotator"
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="BEC72826.1"
                     /translation="MESNSPDIDFIELFLFLKKKIVSIILFVVFIDFVIYFLADKQKQN
                     KYKVRIKYDR"
                     /name="hypothetical protein"
     Typing          complement(1447..1527)
                     /name="MOBP"
                     /typing="oriT"
                     /tool="MOB-suite"
                     /identity="97.561"
                     /coverage="95.0"
                     /evalue="1.1e-31"
     Typing          1606..2101
                     /name="rep_cluster_2350"
                     /typing="replicon"
                     /tool="MOB-suite"
                     /identity="94.024"
                     /coverage="90.0"
                     /evalue="0.0"
ORIGIN
        1 tatgaatcac gcctgaagga aaagctgcac gttatcagca agcgttacac tcagcgcatt
       61 gagcgacata atctgaatct gaggcaacat ctggcaaggc tgggacggaa gtcactgtcg
      121 ttttaaaatc ggtggagctg catgacaaag tcatcgggca ttatctgaac ataaaacact
      181 atcagtaagt tgagtcatca ccgcgattcc gatgaaaaat tcgcacgaaa atatggctaa
      241 ctcatagcaa aaagtcctac ggggcttttt tgtacctgcc aatcagctgg atttaccata
      301 acatccgttg cgtgcaccgc ctgagaggcc tcagggcgtt tctgacggga aaccggtaaa
      361 acaggcaaca aaccacccga aaacccgcca gaaacgcgca ggctctgttt ttacggcatg
      421 catgagtatg cgcgcaagtg catagcgcgg aaattcacgc cattcagccg gggtaagtcc
      481 tgtttccggc gttcttccca tccgaaaacg gtgaacgggg acgcaattta ttgcgtggcc
      541 gtgaggcgtt gaccaagcca taaggcccgg taggtaattg caggtatccg gaaaaccatt
      601 ttcagcactg caggattcaa aatcagaagg ggctatctct gatgtacttt gagatggttc
      661 agacagaaaa aaaccattgt caggatctga gagaaattgt ttctgcagca gacacagtcc
      721 acatcacgta aaagttgtat ctgtagtttt ctcaattgta gtcaaacgca accagtgaga
      781 tattcaggcc gtaacgttta ttcagtacag ttacaatctc ttccctacgg ataccattct
      841 gttgtaaatc gttctggaat cctgaagctg caatggctat cttgtagttt tgttgcccat
      901 aatggtcatt tgctaatgtc caaaaataag agtaaaacgc aaaaaatgtc ctacaattgc
      961 ttcttatttt tgtcctttcc ggttcgatgt atccatgaac cgcctgatgt ggaacgcttt
     1021 ttatcgatct catgcgctac caaagataga ttcattcttt aaaagtcagg ttacattatc
     1081 ccttaaatgg ccatacacca tacgcaaccg cgattttcat tgcaattgca tgaattaaaa
     1141 ggtaaaaact gaagtccccg tttatttatg taatacgcaa cgtattacaa ccacctgtaa
     1201 tcacatgaaa ataaagaaat aagatgtaat accggcgtat taccacgtac gcgggtaagc
     1261 gaaaaagcta taacgcttcc cggccgacag gcggcccaaa atccaccggg gcgtgcaggt
     1321 tctcttcagt aacctgcgcc attaaatcaa aaaggtcata ttcgcctgga agctgcgtat
     1381 cagtcgaatc cagttgttca tcatattcag atggcatggg gtgatatcca gtagctgaaa
     1441 ggttgttagc gggtttcagg gcgcagccct gaaccagtca cgtagcgcta gcggagtgta
     1501 tcctggctta ttatgttggc atgagtggag taacaacatg aaaggcttca tgttggcagt
     1561 tcgcccaggc accggcgcgt aagcagtgct tatgcgttac agatttccgc ttcctcgctc
     1621 aatgactcgc tacgctcggt cgttcgactg cggcgagcgg tgtcagctca ctcaaaggcg
     1681 gtaatacggt tatccacaga atcaggggat aaagccggaa agaacatgtg agcaaaaagc
     1741 aaagcaccgg aagaagccag caccgcaggc gtttttccat aggctccgcc cccctgacga
     1801 gcatcacaaa aatcgacgct caagtcagag gtggcgaaac ccgacaggac tataaagata
     1861 ccaggcgttt ccccctggaa gctccctcgt gcgctctcct gttccgaccc tgccgcttac
     1921 cggatacctg tccgcctttc tcccttcggg aagcgtggcg ctttctcata gctcacgctg
     1981 taggtgtatc tcggcccggt gtaggtcgtt cgctccaagc tgggctgtgt gcacgaaccc
     2041 cccgttcagc ccgaccactg cgccttatcc ggtaactatc gtcttgagtc caacccggta
     2101 agacatgcaa aagcaccact ggcagcagcc attggtaacc gagttagcag agcgagattt
     2161 gtccagatgc ttacagagtt cttgaagtga tggcctgact acggctacac tagaaggaca
     2221 gtatttggta tctgcgctct gctgaagcca gttacccggt tagacaatct gccaggatta
     2281 gctaaccttc gaaaaaccac ctgccagggt ggttttttcg ttttacagag caagagatta
     2341 cgctcagata tagatgatct caagaggatc ttaaaatatg tggaaaggat acaggctgat
     2401 aactctcttc catagacata accgaacaaa aacaaacaaa aaattgattt taggagtttt
     2461 cacccctaaa taataggtaa aatgtttttt atttgattgg catttaaaat gaaatatact
     2521 aaatcagcga aaatattcat cacggctatt ttaattttat ttatttattt atcctatact
     2581 ttaataacta ttgttggtat ataaaaatgg aaagcaattc acctgatatt gatttcatcg
     2641 agttatttct ctttcttaag aaaaaaatcg tgagtattat tttgtttgtt gttttcattg
     2701 attttgtcat ctattttctt gctgataaac aaaaacaaaa taaatataaa gtacgaatta
     2761 aatatgatcg ctaattcgcc aagtatgatt attaatcagg tctgactttt attgtaaagc
     2821 gaatatcata caatcaatca taaacaataa aagcaagtct ataacatcaa atatagatga
     2881 aagaggaaaa aaaataatcc tgtcatgggc tggtgatgac cgttacaaac cactggttac
     2941 ccctggagta aacgctaccc ataaagctat tgatgactgg tacatccaag attataaaac
     3001 ttataaaagc atagttaaca actgtgacag caactatata aatggcactg aaacatatgc
     3061 aaaagttgca ttattaacaa aaataaacac tgccggagaa aaaacttcat ttcaataaat
     3121 gatgaaatag tgaataaaaa gtataaacca gctttaatta tggctctaac gttaattata
     3181 gccgttatct ttttcctcct cgtatcatat aataaaagat ctatacttga atataaaaat
     3241 aagttaaaca ggtcttttta ttagcctgta acgattaata atcgtattct agcaacatcc
     3301 gttacacgcc agatagaaaa gcccgctaat agcgggcctc cctgataaac ctcaagtgaa
     3361 taagggcagt cagttctatt tattaccctt ccattgccta actgattctc cgtggcactg
     3421 ggccaactgc agcattttta ttcccatgag gaacccgatt ggtcacctcg cgggtaatgc
     3481 tgccaacttg ctgatttagt gtatgatggt gattttaagg tgcttgcgtg gcttccattt
     3541 ccatcagatg tccttcctgc tccgctactg aaggcgtggt gcgtaacggc aaagcactgc
     3601 cggacatcag cgctatctct gctctcattg ccgtaaaaga tggcaactac agttccctta
     3661 caccgcctct cagcccggta cgcaccagaa aatcattgat atggccaaga atggcgtcgg
     3721 atgtcgcgcc ggtgcacgca gtatgggcgt tggcctcaac acggttttac gtcacttaaa
     3781 aaactcaggc cgcagtcggt aacctcgcgc atacaaccgg gcagtgatgt gattgtctgc
     3841 gctgaaatgg acgaacagtg gggctacgtc ggtgctaaat cacgtcagcg ctggctattt
     3901 tacgcgtatg acaggatacg gaggacggtt gtggcgcacg tcttcggtga acacactctg
     3961 gccacactgg agcgtcttct gagcctgctg tcggcctttg agatcgtggt atggatgacg
     4021 gatggctggc cgctg
//
