LOCUS       AP027774                2459 bp    DNA     circular BCT 03-NOV-2023
DEFINITION  Escherichia coli 2017.03.02CC plasmid p2017.03.02CC_5 DNA, complete
            sequence.
ACCESSION   AP027774
VERSION     AP027774.1
DBLINK      BioProject: PRJDB14867
            BioSample: SAMD00562588
KEYWORDS    .
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1
  AUTHORS   Hoang,H.T.T., Yamamoto,M., Calvopina,M., Bastidas-Caldes,C.,
            Khong,D.T., Nguyen,T.N. and Yamamoto,Y.
  TITLE     Comparative genome analysis of colistin-resistant Escherichia coli
            strains possessing mcr isolated in Ecuador and Vietnam
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 2459)
  AUTHORS   Yamamoto,Y. and Hoang,H.T.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAR-2023) Contact:Yoshimasa Yamamoto The United
            Graduate School of Drug Discovery and Medical Information Sciences,
            Gifu University; Yanagido 1-1, Gifu 501-1194, Japan
COMMENT     ##Genome-Assembly-Data-START##
            Assembly Method       :: Unicycler v. 0.4.8
            Genome Coverage       :: 131x
            Sequencing Technology :: MGI DNBSEQ-G400RS; ONT MinION Mk1c
            ##Genome-Assembly-Data-END##
            Annotated by DFAST https://dfast.ddbj.nig.ac.jp/
FEATURES             Location/Qualifiers
     source          1..2459
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="2017.03.02CC"
                     /isolation_source="feces"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /plasmid="p2017.03.02CC_5"
                     /geo_loc_name="Viet Nam:Thai Binh"
                     /collection_date="2017"
     gene            complement(501..731)
                     /locus_tag="VEE52_48240"
     CDS             complement(501..731)
                     /locus_tag="VEE52_48240"
                     /inference="COORDINATES: ab initio
                     prediction:MetaGeneAnnotator"
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="BEC44501.1"
                     /translation="MMNAEDKLFKNVDRLMLHDSLKKNEVLTVWERTFLSSVYSIYRRT
                     SGNKYSTKGLSPKQKNAAFSILKKYNYHLMD"
                     /name="hypothetical protein"
     gene            complement(718..1221)
                     /locus_tag="VEE52_48250"
     CDS             complement(718..1221)
                     /locus_tag="VEE52_48250"
                     /inference="COORDINATES: ab initio
                     prediction:MetaGeneAnnotator"
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="BEC44502.1"
                     /translation="MAKRGAGVNTKKISRLERHTYMDENGEVKQDSKIETFSIPAEPPY
                     VKLYIADIAMIHGLSKSQNDVLLQLAMLIGWDGFVSVSKTRFEKTIQPRVHIEYQTFKN
                     IIAALVDKQIFFRAGRGELEANPFLFARGDWPSIYERRKKIELKISYDTNGRTVQTKVM
                     DDEC"
                     /name="hypothetical protein"
     Typing          2..399
                     /name="MOBV"
                     /typing="relaxase"
                     /tool="MOB-suite"
                     /identity="96.241"
                     /coverage="96.0"
                     /evalue="8.47e-58"
ORIGIN
        1 cgtggcaccc gtagccaggt atcgatctcg ccggaggcgc tggagccgcg tgtattgcgg
       61 aagggcattt tcaccaaaga cgtggaagat caggcagcca tagccaaacg tctaagccac
      121 gcagtgaacg atggctttgc aggaaccatc gctatggcct ctcagagcgc ccagaacgca
      181 aaaagagcgc gtgagctaca gaagactatg gatgcgcagc agaaacgcct acagagcgtt
      241 acagagcctt ttaaggggct ttccagagag cagatgaccg aaatcctgat gatggctcag
      301 cggtttaagc agcaaaacca ggaaaaggaa aaacagcagc gtattgaacg tgaaaaacag
      361 cgacagacgc gatcgcgtgg catgggtggt atggagcgtt agttttgatg cgatgcagga
      421 tagggctaac gccgcaaagt gacgtcattt gcggcattcc agagatcagg ttctgccgcc
      481 ctgtataacg ctgaggccag ctaatccatc agatggtaat tgtatttttt caaaatagaa
      541 aaagctgcgt ttttctgctt tggtgacaaa cccttagttg agtatttatt accgctagtt
      601 ctacgatata tgctgtaaac actgcttaaa aaagtacgct cccaaacagt cagaacctca
      661 ttctttttta gtgaatcatg cagcattagc ctgtctacat ttttaaaaag tttatcttca
      721 gcattcatca tccattacct tcgtctgcac cgttcttcca ttggtgtcat aactgatctt
      781 taactcaatt ttctttcttc tttcgtaaat tgatggccag tctccccgtg caaaaagaaa
      841 ggggttagct tcaagttccc cacgccctgc ccggaagaat atttgtttat ctacaagagc
      901 cgcaattatg tttttaaagg tctgatattc aatatgaacc ctgggctgta tggttttttc
      961 aaatctagtt tttgatacag acacaaaccc atcccatcca atcagcattg ccaattgtaa
     1021 aagcacatca ttttgagatt ttgataaacc atgaatcatc gcaatgtctg caatgtatag
     1081 cttgacgtag ggaggttcgg ctgggatgga aaaggtctcg atcttagagt cttgttttac
     1141 ctcaccgttt tcatccatgt atgtatgccg ttcaagccta gaaatctttt tcgtattcac
     1201 tccagcccca cgtttcgcca tgatttagta ctcgcattta agtactaaag agacatacag
     1261 tcaagtcctt tgcatcaagt acgattagta cttgaggtga gtacgattag tccttgaggt
     1321 gagtacgatt agtacttgag gtgagtacga ttggtacttg aggtgagtac gattcttcgc
     1381 tctagccctt ggtacaagcg ggttcccata tctatatcta tatattaaga gggaaaataa
     1441 aggctgaaaa acgccatttt taaacatcga aaaacgagct tttttgagtc tggagcgtac
     1501 ggatttctat gtccggggag tggaaattcc gcttcctcga acggacagac tcgcggcgat
     1561 gccgctccct aatccgttct tgcggcgagc ggttcctgct ctttcaaaaa cgatattcat
     1621 tgcctgattt cgtcaggggc gagcgaagcg agtgccattt acccttgacg actcaccgga
     1681 taaaacaggc ttggcagtgg tggggggtgg cgcggagcga cgccttccac ctgccagact
     1741 gccgttgatt ttgaccttct ggcagcttgc tgcccgaacg attttgcgta gcaaagtcta
     1801 gtgagtacac tatcatcttg atagtggccc gccggaggta tcgcaatgcg ctcccccgcc
     1861 tggctgaatg aatgccggaa tcagggggga acatggcgaa ctacgcgata atgcgctgca
     1921 aaaagctgac gggaatggga agcgtggcca gcgcgttgca gcactgctac cgagagcgtg
     1981 agacgccgaa cgctaacgct gaacggacac cagaaaacta ctgctctgtg tccaaatcaa
     2041 cggatcaggc aatggggcgt gtgcgggagc tgctgccgga aaaacgccgt aaagatgcgg
     2101 tactggccgt tgaatacgtt atgacagcaa gccctgagtg gtggaaagag gccacaccac
     2161 ggcagcaggc ggagtttttc gcccgctctg agcaatggct ggagaagaaa tacgggaagg
     2221 atcgtgttgt ggcggcggtg gttcaccggg acgaggccac cccgcacctg tctgcgttcg
     2281 tggtgccatt gacgcaggat ggacggctgt ccgcgaaaga gtttattggc gggcggtcaa
     2341 agatgcgtga agatcagagc acctacgctg aatcagtaaa aaaactgggt cttgagcgcg
     2401 gcatcgaggg aagccgcgcc acgcatcaga cagttcagca ctactacgaa tcgataaac
//
