LOCUS       AP027773                2757 bp    DNA     circular BCT 03-NOV-2023
DEFINITION  Escherichia coli 2017.03.02CC plasmid p2017.03.02CC_4 DNA, complete
            sequence.
ACCESSION   AP027773
VERSION     AP027773.1
DBLINK      BioProject: PRJDB14867
            BioSample: SAMD00562588
KEYWORDS    .
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1
  AUTHORS   Hoang,H.T.T., Yamamoto,M., Calvopina,M., Bastidas-Caldes,C.,
            Khong,D.T., Nguyen,T.N. and Yamamoto,Y.
  TITLE     Comparative genome analysis of colistin-resistant Escherichia coli
            strains possessing mcr isolated in Ecuador and Vietnam
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 2757)
  AUTHORS   Yamamoto,Y. and Hoang,H.T.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAR-2023) Contact:Yoshimasa Yamamoto The United
            Graduate School of Drug Discovery and Medical Information Sciences,
            Gifu University; Yanagido 1-1, Gifu 501-1194, Japan
COMMENT     ##Genome-Assembly-Data-START##
            Assembly Method       :: Unicycler v. 0.4.8
            Genome Coverage       :: 131x
            Sequencing Technology :: MGI DNBSEQ-G400RS; ONT MinION Mk1c
            ##Genome-Assembly-Data-END##
            Annotated by DFAST https://dfast.ddbj.nig.ac.jp/
FEATURES             Location/Qualifiers
     source          1..2757
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="2017.03.02CC"
                     /isolation_source="feces"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /plasmid="p2017.03.02CC_4"
                     /geo_loc_name="Viet Nam:Thai Binh"
                     /collection_date="2017"
     gene            442..762
                     /locus_tag="VEE52_48220"
     CDS             442..762
                     /locus_tag="VEE52_48220"
                     /inference="COORDINATES: ab initio
                     prediction:MetaGeneAnnotator"
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="BEC44499.1"
                     /translation="MLRKVSNPFELFAKNSVELNMLSLKSKLIIIIAEMIRNEGWSQKT
                     AAEKLGVSQPRVSNLMNGQVSKFAIDTLLEMLCRIGFVMDVSFRPHDEESPIQVSVKKA
                     IV"
                     /name="hypothetical protein"
     gene            complement(784..1110)
                     /locus_tag="VEE52_48230"
     CDS             complement(784..1110)
                     /locus_tag="VEE52_48230"
                     /inference="COORDINATES: ab initio
                     prediction:MetaGeneAnnotator"
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="BEC44500.1"
                     /translation="MSSELDLFFVGSADKEFESDLSQAAQEKFATVFTMMIAGLKPPLS
                     DSKPLNGLGKGVYELRKNGRPAYRCVYVVKDGTLYVLHAFSKTSGGTPKSHEETIKKRY
                     KSIK"
                     /name="hypothetical protein"
     Typing          complement(1618..2000)
                     /name="rep_cluster_2373"
                     /typing="replicon"
                     /tool="MOB-suite"
                     /identity="95.596"
                     /coverage="89.0"
                     /evalue="2.89e-174"
ORIGIN
        1 tagccatgca gactcgtaga aatcatcagg cgcgtttttt cacgatatag gtatagggaa
       61 gtgccggaaa cagtcatccc gccgcagaaa tgcgctgagg gcgtctgagg gggtgcgggc
      121 aacggatgtt atggtaaatc acatcacttt ttaccttgga aaagatgttt tgctttgctc
      181 atctttttaa gatttttgcc gatattgata gatcttggta ggtattctac taaaaaaaat
      241 aaataaaatt ttattcgtat gcctattgcg cagatgctaa aagagacata taacaagtgt
      301 tgtgcatata cttacttgta taaaagattg cttaattctt cggaatacgt ataatcttac
      361 gcccgtactg ctaaagaaaa tgtacgatgt tatttttatg ttttatgtac cactcacaga
      421 acaacaagag gagagtatct aatgctgcgt aaagttagca atccgttcga actcttcgct
      481 aagaactctg ttgagctcaa catgctgtct cttaagtcca agcttattat tatcattgca
      541 gagatgatcc gtaacgaagg ctggtcacag aaaaccgcag ctgagaagct cggagttagc
      601 cagccaagag taagcaactt aatgaatgga caggtgtcca aattcgcgat tgatacatta
      661 ctagagatgc tatgccgcat cggctttgtt atggatgtat cttttcgtcc gcatgatgaa
      721 gagagcccta ttcaagtaag tgtaaaaaag gcgatcgtgt aaggatcgcc tttgggttac
      781 tgtttatttt attgatttat aacgtttttt gattgtttct tcatgcgatt tcggtgttcc
      841 gcccgacgtc ttcgaaaagg cgtgtaatac gtaaagggtg ccatccttaa ctacgtatac
      901 acagcgatag gctgggcggc cgttttttct taactcatac acacccttgc ctaacccgtt
      961 gagtggtttt gagtctgaaa gcgggggctt taatcctgca atcatcatcg taaacactgt
     1021 tgcaaacttt tcttgagctg cctgtgatag gtcgctttcg aattccttgt ctgcacttcc
     1081 tacaaaaaac aaatccaatt cactactcat tgtgcacctc cttcggtcac aaaaaattat
     1141 gcgttcatac gcaggccctc ggttgattga agaaaccacc tttagctatt caaaataaaa
     1201 atagaggtgg gggtaactgg tcgagtatat atgtcttccc gcacttaagg aaggggatat
     1261 ataagtattt ataactaaat catcagtctg cgcttattta ttgagcagtc tatagctctt
     1321 ttcatcattc ttattcttcc taatgcggaa tttttggtgt cagtatctga gttgatgcta
     1381 aaaaaaacta tataactctt gaggatgctt ctaaggtgag tgcttgacgc ttcttcttca
     1441 ttaggcgtag tcttaggttc aaaagaaaaa ccgccctggc aggcggtttt tcaaaggttc
     1501 attaagttgg ggaacttatg aaccgcggta actggcttta gtggagcgca gtaacctaat
     1561 tcgtccttcc agtgtagccg ctcttcggtc gacacttcaa gaactcctta tgtaggctcc
     1621 actccaaaac agttgccaat ggctgctgcc aatggcgcgt tgtcgtgtct ttccgggttg
     1681 gactcaagaa gacagttacc ggaaaaggcg cagcggtcgg actgaacggg gggttcgtgc
     1741 atacagtcca gcttggagcg aactgcctac ccggaactga gtgtcaggcg tggaatgaga
     1801 taaacgcggc cataacagcg gagtgacacc ggtaaaccga aaggcaggaa caggagagcg
     1861 cacgagggag ctaccagggg gaaacgcctg ggatctttat agtcctgtcg ggtttcgcca
     1921 ccactgattt gagcgtcaga ttctgtgatg cttgtcaggg gggcggagcc tatggaaaac
     1981 cggcagcgcc gcggcctttc ctccctcgct ttatctcgtc gtcatcgcca tatgcctttg
     2041 tgaatattct ccgtccgctc gccgcagccg aacgaccgag cgtagcgagt cagtgagcga
     2101 ggaagcggaa tatcttcggc ctcacgtccg gcaccttaca ctccgtaact gcattttttc
     2161 ataggatgct ggattacaaa ggttaaagca gcggacagga aatgttttgt ggccacatct
     2221 tgccttatcg gcaccacaaa acagtgtaac ctgatgtgtt tttggcgtac cgctgatact
     2281 ccacatcgct atgctcgggc tcttccaaac accagtagcg atacgtgttt ggaatgtgtc
     2341 ctgaatctgt ttgttcagtg tttgcaatgt gtcctgaatc tgtttaggaa gtgtttgcaa
     2401 cctgtcccga atctgtttgc tcagtgtttg caacctgtcc cgaatctgtt tgctcagtgt
     2461 ttatagcctg ttttctcact gatttactct gcatgtccaa ggcacgttag cgatgtatac
     2521 atcgccgcgc cgcaagggtg ccccttccga atcccgttca tcactgcgtg ctgattaatc
     2581 cacgttaaat ccgaccccct tagcaataaa ttcagccatg cctgacggcc tggccaacgc
     2641 ctcacggccg cacagtaaac tgcgcacccg tgaggcgtta ttcgtgaggt taagtggtgc
     2701 ttttggacgt cctgccggat tttagccgct aaaatcccgg ccatgcatgt gtgtgca
//
