LOCUS       AP027758                1987 bp    DNA     circular BCT 03-NOV-2023
DEFINITION  Escherichia coli 2017.02.04CC plasmid p2017.02.04CC_4 DNA, complete
            sequence.
ACCESSION   AP027758
VERSION     AP027758.1
DBLINK      BioProject: PRJDB14867
            BioSample: SAMD00562587
KEYWORDS    .
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1
  AUTHORS   Hoang,H.T.T., Yamamoto,M., Calvopina,M., Bastidas-Caldes,C.,
            Khong,D.T., Nguyen,T.N. and Yamamoto,Y.
  TITLE     Comparative genome analysis of colistin-resistant Escherichia coli
            strains possessing mcr isolated in Ecuador and Vietnam
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 1987)
  AUTHORS   Yamamoto,Y. and Hoang,H.T.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAR-2023) Contact:Yoshimasa Yamamoto The United
            Graduate School of Drug Discovery and Medical Information Sciences,
            Gifu University; Yanagido 1-1, Gifu 501-1194, Japan
COMMENT     ##Genome-Assembly-Data-START##
            Assembly Method       :: Unicycler v. 0.4.8
            Genome Coverage       :: 146x
            Sequencing Technology :: MGI DNBSEQ-G400RS; ONT MinION Mk1c
            ##Genome-Assembly-Data-END##
            Annotated by DFAST https://dfast.ddbj.nig.ac.jp/
FEATURES             Location/Qualifiers
     source          1..1987
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="2017.02.04CC"
                     /isolation_source="feces"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /plasmid="p2017.02.04CC_4"
                     /geo_loc_name="Viet Nam:Thai Binh"
                     /collection_date="2017"
     gene            complement(626..817)
                     /locus_tag="VEE51_43950"
     CDS             complement(626..817)
                     /locus_tag="VEE51_43950"
                     /inference="COORDINATES: ab initio
                     prediction:MetaGeneAnnotator"
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="BEC30148.1"
                     /translation="MKEWIHCKTAVIFWITLAIYVLICFTVSYVGVYVTYIAGPILLVT
                     GILAWLTKPSSNPNKSNM"
                     /name="hypothetical protein"
     gene            complement(814..1026)
                     /locus_tag="VEE51_43960"
     CDS             complement(814..1026)
                     /locus_tag="VEE51_43960"
                     /inference="COORDINATES: ab initio
                     prediction:MetaGeneAnnotator"
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="BEC30149.1"
                     /translation="MGDFERTYGAGADFDRIIDENNSEYFREERQKAKNSKKEFSSFQD
                     ALAWAKANPGKTIVRSPDGVGFIEK"
                     /name="hypothetical protein"
     Typing          4..375
                     /name="rep_cluster_2373"
                     /typing="replicon"
                     /tool="MOB-suite"
                     /identity="95.979"
                     /coverage="86.0"
                     /evalue="6.25e-171"
ORIGIN
        1 agaggccgcg gcgttgccgg ttttccatag gcttcgcccc cctgacaagc atcacagaag
       61 ctgacgctca aatcagtggt ggcgaaaccc gacaggacta taaagatccc aggcgtttcc
      121 ccctggtagc tccctcgtgc gctctcctgt tcctgccttt cggtttaccg gtgtcattcc
      181 gctgttatgg ccgcgtttgt ctcattccac gcctgacact cagttccggg taggcagttc
      241 gctccaagct ggactgtatg cacgaacccc ccgttcagtc cgaccgctgc gccttatccg
      301 gtaactatca acttgagtcc aatccggaaa gacacgacaa agcgccactg gcagcagcca
      361 ctggtaacag gtttagagga ggagagtctt gaagtttcgg gtgcgataag gctacactga
      421 aaggactaat ttggtgactg tgctcctcca agccagttac cgcggttcaa aagagcgtca
      481 actcttgcga accttcgaaa aagccacctt gccgggtggc tttttcgttt acagagctaa
      541 gagattacga ttctccctaa atgatctcaa gaagatccgt ttaaaaaagc gggttttatg
      601 gttggatgaa gttcgtcttg cccagtcaca tattagattt atttggatta ctactaggtt
      661 tcgtaagcca tgcaagaatt cctgtaacta acaaaatagg ccctgcaatg tacgtaacat
      721 agactccaac atacgacact gtgaaacata tgagtacgta tatagccagt gttatccaaa
      781 aaatgactgc cgttttacag tgaatccact ctttcatttt tcaataaatc ccacaccgtc
      841 tggagatctt actatcgttt taccaggatt agctttcgcc caagccaaag catcttgaaa
      901 agaagagaat tcttttttcg aatttttagc tttttggcgc tcttctcgaa aatattcgct
      961 gttattctca tcaattatcc gatcaaaatc agcaccagct ccgtaggtac gctcaaaatc
     1021 ccccatttcc tgcccccata aatttaataa aaaaacagat ttaaaatatc caacagacac
     1081 tcttatttac cataacatct cttgcccgca tcgcctcagg cgtcctcagc gcgtttctgc
     1141 ggcgggatga ctgtttccgg cacttcccac tgcctgtacg agaaaaaaaa gcccctgatg
     1201 attctggcgc gtctgcatgg ctatgcacac acatgcatgg ccgggatttt agcggctaaa
     1261 atccggcagg acgcccaaaa gcaccactga acctcacgaa taacgcctca cgggtgcgca
     1321 gtttactgtg cggccgtgag gcgttggcca ggccgtcagg catggctgga tttattgcta
     1381 agggggtcgg atttaacctg gattaatcag cacgcagtga tgaacgggat tcggaagggg
     1441 cacccttgcg gcgcggcgat gtatacatcg ctaacgtgcc ttggacatgc agagtaaatc
     1501 agtgagaaaa caggctataa acactgagca aacagattcg ggacaggttg caaacacttc
     1561 ctaaacaggt tcgggacaga ttgcaaacac ttcctaaaca ggtacgggac agattgcaaa
     1621 cactgattgc taagggtatc gggcagagca tggtcatagc gttttggagt atgggcggta
     1681 ctccaaaaac acatcttgtc ccgctgtttt gtagcgccga caaactggcg gtggacacaa
     1741 aacatatcct gtcatctgct ttaactgttg taatccagaa gtgtcaggtg acgtcacttt
     1801 acggcgttag ccctatcctg catcgtatta aaaatgcagc tatggcgtgt acggtgccaa
     1861 agataagtac gaagatattc cgcttcctcg ctcactgact cgctgcgctc ggtcgttcgg
     1921 ctgcggcgag cggggggtac ggagacataa aggcacaggc aatgagagag gatggagacg
     1981 caacaag
//
